Basic Information

Gene Symbol
-
Assembly
GCA_002382865.1
Location
NWSH01002958.1:14843-18872[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 1.9 1.3e+03 -0.6 0.0 4 19 176 191 174 197 0.89
2 10 1e-08 6.9e-06 25.8 0.2 1 45 280 326 280 327 0.92
3 10 7.2e-07 0.00048 19.9 0.1 2 44 334 380 333 382 0.95
4 10 2.9e-11 2e-08 34.0 0.0 1 43 386 428 386 430 0.97
5 10 0.0055 3.7 7.5 0.0 3 45 438 482 436 483 0.88
6 10 1.9 1.3e+03 -0.6 0.0 4 19 666 681 664 687 0.89
7 10 1e-08 6.9e-06 25.8 0.2 1 45 770 816 770 817 0.92
8 10 7.2e-07 0.00048 19.9 0.1 2 44 824 870 823 872 0.95
9 10 2.9e-11 2e-08 34.0 0.0 1 43 876 918 876 920 0.97
10 10 0.0055 3.7 7.5 0.0 3 45 928 972 926 973 0.88

Sequence Information

Coding Sequence
ATGGAAATCAACGATATTGATATGGATGTAGACACCGACTCGGAATTCGACAGCGATGAAGATGCATTGCTGGAAGCTGAAAACATGAAGAGACTTAATGCTCTGCTGGAAGAAGAAGATGATGCTGCTCTGACCGAAACGATGTCTCAACGATTGTCAGACTTGCCTTCGGTCCACCCCGCGCCTGTCGTAAGACCATGTTCCTCAAACCCCACGTCAGACGACACACAATCCAGAGCACTAGCACAAATAGATGTGGCTCTGTCCGCAAACAAAATATTAGACGAAAAGATGCGGCGGCTCGAGAGAGATCTCGGCCTACGTCTGCGGGAATGCCGCGAGAAGCTCCAAGTGATACAGAATAGTGGTGGGGGACACGGCGAGAAGAAGGAAATATTCCGCTACATCAACTGTGGCAGGCCTTACTTCAAGGACAGACTTAACTTTCCCGCTCCTGATAATGAAGATGCTAAAATGGCAAAATCTCAGATGTACGACTTCTCCCTCGTCATCTCAGTCCCCGGCTGGACTGTCAGAGACAAGTCCCAGTTCATTAACATGGTACACAAAATGTCTATAGACAACAGAAAGAATGCACTGCATGCTaaaattacaaacttaaaaagaaGAAGTAAATCAAATAGATCAAAAGTTGAAGAAGAAATTACGGCTATTAGAAATGAAATTGATCAAGTAAGTTCCTTGCCTTTCAGTCAAATAGCTCTTCCCATAGATGAAGAGTATGACTGGGATATGTTAGCCAATAAACTGAACAGAAGGCACACAGCACAAGAGTATCAATCTCTGTGGAAATTATTCTTTCACCCGTCAATCAATAAAAACAGTTGGAGCAAAAGTGAACATGCAGCATTACAGAAAATAGCCTGCCAGAACCGACAACAAGACTGGGATGATATCGCTCGCAAATTGAACACGGGCAGAACAGGGTACCAATGTTTTGTATATTATCGTACAAATATGATCAACTCATTTACAGGTAAAAAGTGGACCAGTGAGGAGATAACTTATCTTAAAAGATTAATTGATTACTTCAAAGAAGACATGTATATACCATGGGGTAAGATTGCTGCAGCTATGGAAAACAGAACAAAAATTCAAATCTATAATAAGTATTTGAGAATAATTGAACAGAGAAAGGGCAGGTTCCTTCCTGAAGAAGATGCTGTTATTCTAAACTGTGTGGAAAGATTTGGGACTAATTTCAGAAAGATGACCAATTATTTACCTGGTAGGTCTATGGTTCAAATACGTACCAGATATCAAGTCTTGAGCAAAATGAGAGTCTCAACTGTATGGACCGTGGAAGATGATAAGAGACTCATTCAAATAATGACCAATCAAGATGCTAACATGAACTTTTCAACAGCCACACAATATTTCCCAGGTAGAAACAGAACAAAACTAAGAACTAGGTACATGACCTTAATGAAATGGATGAAGAAACATCCCACTTTAGATTTAGAACATGCACCAAGAAGAGACACCGACTCGGAATTCGACAGCGATGAAGATGCATTGCTGGAAGCTGAAAACATGAAGAGACTTAATGCTCTGCTGGAAGAAGAAGATGATGCTGCTCTGACCGAAACGATGTCTCAACGATTGTCAGACTTGCCTTCGGTCCACCCCGCGCCTGTCGTAAGACCATGTTCCTCAAACCCCACGTCAGACGACACACAATCCAGAGCACTAGCACAAATAGATGTGGCTCTGTCCGCAAACAAAATATTAGACGAAAAGATGCGGCGGCTCGAGAGAGATCTCGGCCTACGTCTGCGGGAATGCCGCGAGAAGCTCCAAGTGATACAGAATAGTGGTGGGGGACACGGCGAGAAGAAGGAAATATTCCGCTACATCAACTGTGGCAGGCCTTACTTCAAGGACAGACTTAACTTTCCCGCTCCTGATAATGAAGATGCTAAAATGGCAAAATCTCAGATGTACGACTTCTCCCTCGTCATTTCAGTCCCCGGCTGGACTGTCAGAGACAAGTCCCAGTTCATTAACATGGTACACAAAATGTCTATAGACAACAGAAAGAATGCACTGCATGCTaaaattacaaacttaaaaagaaGAAGTAAATCAAATAGATCAAAAGTTGAAGAAGAAATTACGGCTATTAGAAATGAAATTGATCAAGTAAGTTCCTTGCCTTTCAGTCAAATAGCTCTTCCCATAGATGAAGAGTATGACTGGGATATGTTAGCCAATAAACTGAACAGAAGGCACACAGCACAAGAGTATCAATCTCTGTGGAAATTATTCTTTCACCCGTCAATCAATAAAAACAGTTGGAGCAAAAGTGAACATGCAGCATTACAGAAAATAGCCTGCCAGAACCGACAACAAGACTGGGATGATATCGCTCGCAAATTGAACACGGGCAGAACAGGGTACCAATGTTTTGTATATTATCGTACAAATATGATCAACTCATTTACAGGTAAAAAGTGGACCAGTGAGGAGATAACTTATCTTAAAAGATTAATTGATTACTTCAAAGAAGACATGTATATACCATGGGGTAAGATTGCTGCAGCTATGGAAAACAGAACAAAAATTCAAATCTATAATAAGTATTTGAGAATAATTGAACAGAGAAAGGGCAGGTTCCTTCCTGAAGAAGATGCTGTTATTCTAAACTGTGTGGAAAGATTTGGGACTAATTTCAGAAAGATGACCAATTATTTACCTGGTAGGTCTATGGTTCAAATACGTACCAGATATCAAGTCTTGAGCAAAATGAGAGTCTCAACTGTATGGACTGTGGAAGATGATAAGAGACTCATTCAAATAATGACCAATCAAGATGCTAACATGAACTTTTCAACAGCCACACAATATTTCCCAGGTAGAAACAGAACAAAACTAAGAACTAGGTACATGACCTTAATGAAATGGATGAAGAAACATCCCACTTTAGATTTAGAACATGCACCAAGAAGAGGTGCGCGCCGTTTGAATCACGGCTTTGCTAGTGATAACCTAAATGACGccattgaaaacttaaaaaatactttgaacacagaagttgaaataaaatcaaagaaaaagaaaattaatactGTATCTCCCCACGTGGAACTAGACGATGCCCTCACTGTAGTTCTTGTTAATGAACTTGTTAGAGAGAAAGAAACTGAAATGAAAATGCAGAATGCCCCCGAAAATCAGATATATTTAGGTCCCAACCATTTCGTAACTTATGCTGAATTAAACACTACTAACCTACGCAAAACCCTACTATTCCTAAATGCATGTCTAGATCAGACCCGTTACAATAACAGCAAGTATCGTCATTTGTATCCAAATTTAGGAGACAGTGACCAGGATGTATCTCTAGTTAGAGTAAAATCCTATTCTAGAAAGAACAGTGTCAAAACTATAAAGGTTGATGACACTCCCAATGTTTGGGGACGTCCTATACTAAATACAATAGGACAACGAAATTATGTGCTGCCCCCACATCTACAAAGTATTTCTGGATGCAGAGGATTACTTCATCATGTTACGACGACAAGTCAATATTGTGAATCTATTAATCTACATGTCCTTGTCAGAAGAAATTTAGTTATGAAGGAATTACTAGATCAGGTTCTGGAGCGCTTCTACACATTGTTTACATGGCCTATGATCCTATCTAATGAAGGGCCTTGTGACCATTATGAACCAAAATTTAGAACAGATTCAGTTTTCGTCAGACCACCCAAATTGCCAAATCCACCAGCAGtgacaataaatacaaaatgtataaagaaatataaaaacgtAGATCATGCAGAAGTAATTGATTTAAATGAAGAACAGACTAAAGACAATGTGACAGTTGCAGAGAAATTAGAAAGTTCAGATGAGAAGATTGAAAAACTGTTTACTCAtgattag
Protein Sequence
MEINDIDMDVDTDSEFDSDEDALLEAENMKRLNALLEEEDDAALTETMSQRLSDLPSVHPAPVVRPCSSNPTSDDTQSRALAQIDVALSANKILDEKMRRLERDLGLRLRECREKLQVIQNSGGGHGEKKEIFRYINCGRPYFKDRLNFPAPDNEDAKMAKSQMYDFSLVISVPGWTVRDKSQFINMVHKMSIDNRKNALHAKITNLKRRSKSNRSKVEEEITAIRNEIDQVSSLPFSQIALPIDEEYDWDMLANKLNRRHTAQEYQSLWKLFFHPSINKNSWSKSEHAALQKIACQNRQQDWDDIARKLNTGRTGYQCFVYYRTNMINSFTGKKWTSEEITYLKRLIDYFKEDMYIPWGKIAAAMENRTKIQIYNKYLRIIEQRKGRFLPEEDAVILNCVERFGTNFRKMTNYLPGRSMVQIRTRYQVLSKMRVSTVWTVEDDKRLIQIMTNQDANMNFSTATQYFPGRNRTKLRTRYMTLMKWMKKHPTLDLEHAPRRDTDSEFDSDEDALLEAENMKRLNALLEEEDDAALTETMSQRLSDLPSVHPAPVVRPCSSNPTSDDTQSRALAQIDVALSANKILDEKMRRLERDLGLRLRECREKLQVIQNSGGGHGEKKEIFRYINCGRPYFKDRLNFPAPDNEDAKMAKSQMYDFSLVISVPGWTVRDKSQFINMVHKMSIDNRKNALHAKITNLKRRSKSNRSKVEEEITAIRNEIDQVSSLPFSQIALPIDEEYDWDMLANKLNRRHTAQEYQSLWKLFFHPSINKNSWSKSEHAALQKIACQNRQQDWDDIARKLNTGRTGYQCFVYYRTNMINSFTGKKWTSEEITYLKRLIDYFKEDMYIPWGKIAAAMENRTKIQIYNKYLRIIEQRKGRFLPEEDAVILNCVERFGTNFRKMTNYLPGRSMVQIRTRYQVLSKMRVSTVWTVEDDKRLIQIMTNQDANMNFSTATQYFPGRNRTKLRTRYMTLMKWMKKHPTLDLEHAPRRGARRLNHGFASDNLNDAIENLKNTLNTEVEIKSKKKKINTVSPHVELDDALTVVLVNELVREKETEMKMQNAPENQIYLGPNHFVTYAELNTTNLRKTLLFLNACLDQTRYNNSKYRHLYPNLGDSDQDVSLVRVKSYSRKNSVKTIKVDDTPNVWGRPILNTIGQRNYVLPPHLQSISGCRGLLHHVTTTSQYCESINLHVLVRRNLVMKELLDQVLERFYTLFTWPMILSNEGPCDHYEPKFRTDSVFVRPPKLPNPPAVTINTKCIKKYKNVDHAEVIDLNEEQTKDNVTVAEKLESSDEKIEKLFTHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-