Basic Information

Insect: Heliothis virescens
Gene Symbol: -
Assembly: GCA_002382865.1
Location: NWSH01003844.1:45995-49335[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.5e-11 2.5e-08 33.2 0.0 3 35 16 48 14 54 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.5e-11	2.5e-08	33.2	0.0	3	35	16	48	14	54	0.92

Sequence Information

Coding Sequence: ATGGCTGGCGTCAACCCAAAAACAAAGCGAAAAGGATGGAATTCAGAGCATAtggcagaagctattaaatTAGTAAGAGAGAAAAAAATGGGTTATTTGAGAGCTGCTAAGCACTTTGATGTGCCGAGATCTACCTTGTTTCGACTAAGCCAAAAAAACGAATTACTTCCAGAAGAAGCCGCAGCTACTACACTTGGGAGGAAAACAGTTTTAGGGACAACAATTGAACAACTTCTGGTAGACTACATTTTGATTATGGAGAGCAAATTTCATGGCTTGACGAGAAACGATGTTCGTAGAATGGCGTACATGTTGGCAAGACGTAATCAGTTGGAAAATCCATTTGGTGACACGGGAATGGCTGGAAAAAAATGGCTAAAGCTATTTCTTAAACGCCATAAGGACAAGTTGTCAGTGCGAAGACCAACTGGCACATCTTTTGCTCGAGCGTTTGGATTCAGCAAAGAAAAAGTGGACTCATTCTTTGATCTCCTTGAAGGCATGTATGCTCAAGAAAACTATGGTCCAAACCGCATTTACAATGTTGACGAATCTGGGCTCACCATAGTGCAAAGCAAGATACCCCAAGTGGTTGGCCATAAAGGGAAACGACAGATAGGTTCACTTACCTCATCTGAAAGGGGTTCATTAATTACAATTGTTGTTGCCATGAACGTCACTGGTCATTTTGTGCCTCCCTTTATTATTTTCCCTCGCAAGAATATGAGTGATCAGCTAATGAGAGGCAAACCTCCAGGTGCTGTTGGCATTGCACATCCATCAGGATGGATACAAATGAACATATTTACTGAGTGGTTCAAACATTTTATCAAACATACCAACCCTACTCCAGAATCGAAAGTATTATTGATCTTAGATGGCCATTTTTCTCACACTCGTAATATTGACGTGATAGAGCTTGCTAGAGAAAATAATGTAGATATTGTGTCCTTACCTCCACATACAACCCACAAGCTACAGCCACTAGACAAAACTTTTATGGGACCACTGAAAACTTACTATAGTGAAGAAATTCGAATGTGGATCAGAGACAACAATAGACCTCTTGGCCCTTATGATGTTGTTGAACTGTTTGGCAGGGCTTATTTAAAAGTGCAGACTGGTGAGATTGCATCAAATGGATTTCGTGTAACAGGACTATGGccgttgaataaaaatatatttactgccGTCGACTATCTTGCTGCGCAACAAGATGCTGTTAAAGACGGTTGCACAGTCAACGTTACACCAATGACATCAAGTCCTCGACCTTTAGAACAGTCGATGGCCAATTTTAGAACACCTGAGGACTCTGTGCCTTTATCTGAAGCTTCCACATCCAGACAAGATACAAATATTGAACCTACACCCTCAACTTCCGGACTTTCTCGCAGTAGTTTAGGATTAGTGTCTCCATATGATATCAGTCCAGTACCGAACAAGAAAATGAAACCTTCCAATAGAGGAAGAAAAGCATCTGTTGCAGCAGTTATCACATCATCACCATACAAGAATGATCTCATtgaaaaaaacaagaaaaaagaagaaaaagaaaataaattggcCAAAAACAAGAATCAAAAACAAAAGGAGAAGAAATCAAAAGGGAAAAAGCCAAAAGAAAAGACTAAGCCTAAGTCAGATTCAGATTCAGACGATGAAAAGATATTGACATTTGATACAGACAGTGAGCCCGATGCCTTGATGGGAAATACAGCTCCAGACACTGAAGATTCGGAGTGTATTTTCTGTGGCATGCTGTTTTCCAATGATACTCATGGGGAAACTTGGGTCAAATGCTTTATGTGTAGGCTCTGGGCACATACTGAGTGCGCAGGAGCAGAGCAACCAACCTCAACAAGCATTGCACGAGCAATAGGATTCAATAGACCTCAAGTGGAgcgattttatataaatttatccGCTCTAATGGACAAACATAACTTTCCCCCTCAGTCGATTTATAATATGGATGAGACAGGTATGTCCACCGAACCGAACAAACAGCCCAAAGTACTATCTAGAGAAGAGACCACGCAAAGCCGACTAAGGATCAGCCCCATCCTGTTGATTTTAGACAACCACGTCTCGCACTGCACATTAAAAGTTAATGAATTTTACCgccaaaataatataattgcaCTGACGTTCCCGCCCCACAGCAGTCACAAAATGCAACCTCTTGATAGAGGCTTCCATGGAGTTTTGAAGAAGTTTTATTCCAGCGAGTGCGAGAAATGGCTTCGTAATCACCCGGGGAGGGCCATCACTGTCTATCAGGTAGCTTCGATTTTTACTTCTACGTTTCACCAAGCTGCTACAACTGGTCGCGAAGTGGAACTCTTCAAGTGCACTGGTATTGTGCCTTGGAATCCTGACATTTTTGATGACGCTGATTTTCTGGCAAGCAACGTTACAGAAAAGGAAGGCCCCGAAGATAATCCAGATATATCAACTGATTATCAGGGCTTGTTAATTTCTGAAGTGAATGTCTCATGTGACTCTGAACAGACTTCGATGGTTTCTTCAATACAAGTAGCGGAACGAtctaataaaactattgaaatTGATCCACCACAACCCCAGCCTTCCTGCTCGAAACCAATCGTTTTGCATACTTCAGAAAAGTCTATAACGCGTGCATCTGCATCTGAAAACCAATCACCTGTTGTAGAAGCGAG
Protein Sequence: MAGVNPKTKRKGWNSEHMAEAIKLVREKKMGYLRAAKHFDVPRSTLFRLSQKNELLPEEAAATTLGRKTVLGTTIEQLLVDYILIMESKFHGLTRNDVRRMAYMLARRNQLENPFGDTGMAGKKWLKLFLKRHKDKLSVRRPTGTSFARAFGFSKEKVDSFFDLLEGMYAQENYGPNRIYNVDESGLTIVQSKIPQVVGHKGKRQIGSLTSSERGSLITIVVAMNVTGHFVPPFIIFPRKNMSDQLMRGKPPGAVGIAHPSGWIQMNIFTEWFKHFIKHTNPTPESKVLLILDGHFSHTRNIDVIELARENNVDIVSLPPHTTHKLQPLDKTFMGPLKTYYSEEIRMWIRDNNRPLGPYDVVELFGRAYLKVQTGEIASNGFRVTGLWPLNKNIFTAVDYLAAQQDAVKDGCTVNVTPMTSSPRPLEQSMANFRTPEDSVPLSEASTSRQDTNIEPTPSTSGLSRSSLGLVSPYDISPVPNKKMKPSNRGRKASVAAVITSSPYKNDLIEKNKKKEEKENKLAKNKNQKQKEKKSKGKKPKEKTKPKSDSDSDDEKILTFDTDSEPDALMGNTAPDTEDSECIFCGMLFSNDTHGETWVKCFMCRLWAHTECAGAEQPTSTSIARAIGFNRPQVERFYINLSALMDKHNFPPQSIYNMDETGMSTEPNKQPKVLSREETTQSRLRISPILLILDNHVSHCTLKVNEFYRQNNIIALTFPPHSSHKMQPLDRGFHGVLKKFYSSECEKWLRNHPGRAITVYQVASIFTSTFHQAATTGREVELFKCTGIVPWNPDIFDDADFLASNVTEKEGPEDNPDISTDYQGLLISEVNVSCDSEQTSMVSSIQVAERSNKTIEIDPPQPQPSCSKPIVLHTSEKSITRASASENQSPVVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -