Hvir006407.1
Basic Information
- Insect
- Heliothis virescens
- Gene Symbol
- jarid2b
- Assembly
- GCA_002382865.1
- Location
- NWSH01001081.1:113414-132707[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.9 1.7e+03 -0.8 0.0 51 79 433 460 422 463 0.67 2 2 1.2e-19 2.2e-16 59.7 0.0 12 89 826 900 817 900 0.89
Sequence Information
- Coding Sequence
- ATGGGGAGCTTTCATAAAGACAAGGCACGTTCGCGCCGGGTCCAGGCGCAGCGGAAGTTCGCGCAGGGGGTTTATTTGCCCCCAACTGCGGTCGCCGTTGTCACAACCGACACACGGCAGAGTGCCGTACAGGATCCCAACGTGACCATCAACAAAGTATCCGCGACCAGTTTGCTTGACACCGTCTCCATGCAAGGTCTACACACACATATGCAACCTGTAGTTCTGCTGGAAAGGCTTCGTGGCAATAACCAGAGCAGCGACGCGCCGCCTCGCCACGTGCCGCCTCACCTCGCGCCTCCGCGAACCGCGCCGCCTCGCCCTGTGCCGCCTCGCCTCGCACTACctcgccccgcgccgcccgttTACGCGGCGCCCCTCCCTCCGCCACCCCTACCCCCGCCGCCCCGTCCAACCCCTCAGCCTCCCCCAGTCACATTACCTCGTCCCGGACCCAATGATAATGCAGCCACTGCTATGCCCAAACCCCCCACACCCAGACTCCTCAGCATCAGGAAGAAGGATTCTAAACGTAGTCACTCCATGTCACTGCGCTCACGACGTTTGAGCAAGAtcgaaaaattcaaaaatatcgtGAACTCTTGTCGTATAGCAAGAAAATCTATGATGAAACGGAAATTACCTGATCGAACTGCGAAAGTTCCACAGCCTAAAAAGAGAAGTCTAGCAGATAGCAGCATTGAGACGAGTTCAGAATTTTCCGTTGATGACAATAGACCATTGAAGTATTTTGCTAAGGGCAGCAGCACGCCGAAAGCCCAGGAGCCGGCGCAGACACCGCCAAAGCCATCGGTGAAGCTGTCAGCGGCCAGACCCACCGGCCGGCGGGCAAAGCCTGCCCGGGAAGTGATTACTCGACAGTGCTCGTCAGAACCTGTTGCTGGACCTAGCGGAATGAAGAGTTATCGGTCTACTCCTTTAGAAAAGTCTTACAACGTCTTACAAAACGATATACAAACTTGGTTGATGTCTGCGTCACCTGATGAGGACATACACCTGAGATACGATGACGATTCGGAGGAAGAAGCTCATACGTCACCGGAGATTCAAGTGCCGGAGGTTCAGGTACCGGGGGTTCAGGTGCCGCAAGTTCAGGTGCCGAAGGTTCAGGTGCCGCAAGTTCAGGTGCCGAAGGTTCAGGCGCCGCAAGTTCAGGTGCCGCAAGTTCAGGCGCCGGAGGTTCAGGTACCGGAGGTTCAGGTACCGGAGGTTCAGGTGCCGGAGGTTCAGGTGCCGGAGGGAGGAGTGCCGGAGGAAGGAGTGCCGGTGACGTGTATTACACAAAAGTGGCGCTCCGTCCAGGAGGTCATCAATACGCCCCAAGAGGAGCTGGACTCTCGCTGCCAACAATGCAGACAATGCTTACGAATTAAGAAGCTAATGACTCTGTCGGAACTGCTTAGAGCACAGATTAAGATTGGCATGCCGAACGGCACAGATACTGAGCCACAGAATGGTAACGAGGGTGCCGAAAGCGCCGAGACCACCGACGTGTCATGTGGTGACGAAGATCAAAATTATCTGTATCTGGACCTGCTGCCAAAACATGACACTATCATGATGAAGCTACGCATTCATTTGGTACACGAAAAGGAACTGCTGTCCGTTTGTTTGATTCCAAGAAATGAGTCGAAGGAGAACAAACAAGAGTTTCTGCTGCAGGAACAAGAACATCTGCTAGATCAGCTAATCGAGACCCTGACCTTTGGTGGCGACGACAAAAACGAAGACCAGACCAAACGCAGTGATAGCGTTGCTTCCGTCGATAGCATCGAGGGAAGTGATATCACTCTTCCTCAAGACAAGGCGAACGAGGAAAATCTCACGATAGAGAGCAGAAACGCGCGCCAACAAAAGCTGGCATCAGCTAAGAAACGTGTGTTGGACAATAAAGAATTGCAATCGCAACAGCACCAAGAGACACTTAAGCAGATATCGATCATCGAGGCTCAGAAGAACAATATTGAGAAGGAGGTGAACCGCATTCAGGAACAGGTTGACCGATTGCGGGAGGAGAAAGATGCTGCTATAGCTCACCTCAGGACTGAATTGAGAGAAAAATTGAGGGCCGAATTGGAGGCAGACCGCCGGATAATGGCGGAAGTGGGTGGTCTGGCAAGAACCATTGAAAAGGAAAGGGTCGCGAAGGCTATGCACGCGGGATCCGATGGCAACGCGCCGAGCACCAGCCGACAGACTCCTGAAGGCGGCGGCCTCGTGAACGCGCCAGTATTCCGCCCTACCAATGAAGAATTTAATgaccccattgaatattttgaaaagatctGGCCAGAAGCGGTTAAATTTGGTATCTGTAAAGTTGTACCTCCCGAAGGGTGGAATCCTACGTGTAGCATCAACGACAACCTGAGGTTTGATGTGACTAATCAATATATATCGCGGTTATTCAACCGCTGGGGACCGGCTGCGAGGGAACTTTGTGCTATCAAGCTTTGCCTTCACCAACAGAAAGTGAATTTTGCGCGTCCGCCTTtgCTGGATGGTGTAGAGGTGAATTTGCCGAAGCTGTACCACCTCGTGCAAAGACACGGTGGTCTCGAGACTGTTATCAATAAAAAGCGATGGGGCAAAGTCGCTGAAGAGATGAAATTCGCTAAGAACCCCGTCGTTGAGAGGAAACTGGACCTGATATATGTGAAGTACCTTCTGCCTTACGACACTCTTACACATCAGGAACGACAAGAAATAATGCGGAAAGTAGAAAAGGCGTGGAACAGGAAGAATCAGAAGCTTCTGGACCGTGCGATGAACCCACTGCATCGTCAGAAGCGCATGTTGGGTCTATCTGACACATCTGACGATGAGACGGAGGACGAAGACACCGCTGTCGCCGTCAACGAGGCTGAGGACTGCATCATGAAAGGAGCTGTTATGAACCCTCCTAAATTTAAACGGGTAGCGACAAATGCGTTCGAGAACATCTTCGGTCAGGGCTCCGAGGCTTCAGCGCCGCCGCCCCTGGAACAAATAGAGGAGCAATATTGGCGCCATGTGTTGTTGGGCACTGAACACCTGTGTGTGCACACCGCGGCCATAGACACAGGAGAGGAAGGTCACGGTTTCACTAAGAATAGGAGCGAGGCTATGGGACGACACCCCTGGAATCTAAAGATGATCAGCCAGAACCCAAGGAATATTCTCCGTTACCTAGGCCCAGTGCTCGGTGTGACTGTACCCACTTTGCACTTGGGTATGCTGTTCTCAACCAGCTGCTGGCACAAGGATCCTCACACACTACCCTGGAAGGAGTACCAGCACCTGGGACCCACAAGGATCTGGTATGGAATCCCGAGCGAGCAAACGGACAACTTCAGGAAGGCTGTAGAGACTCTTAGTCCAACATCCTGCCAGAACAAGGGTCTATGGCTATCCACCGACATTGCGATGATCCCCCCTCAAGTCCTGCGCGAACATAACGTGTCTCTGTCGCGAGTGACCCAGTCGGCCGGGGAGTTCATACTAGCCTTCCCGAAGGCGTACACTTGCTGCATCAGTACTGGGTACACTGAGTCCGAGAGTGTGTACTTCGCTCCTGTCAGCTGGCTGGCTAATCTTCACGAGGCTTTCCAGGAGGCTCGTGAGAGCTGCGAGCCGACCATGTTCTCAATGGAACAGCTGCTGTACCAGATCGGCAAGGACTCGCGCACCGACCAGCCCGTGCTCGCCATGGTGCAGCCGATCTACGACAAGATGCTCCTCGATGAGGTCACCAATAGGCAGATGCTGCAGGAACGTGGACTCACTTTCGTCAACGAGAACTCTGCGGCGGCCCGGCGCAAGCGAGCTTCCGGCGCATACAACGCTCGCGACCACGACGAGTGTGAATATTGTCGCGCTACGCTCTTCCTTTCAAAGgtgAAGGGGCTGACAGGTAAGAACTCGTCGCTATGTCTGGAACACGCTTTGCGTCTGATGGACACCGGCCGGTATGGCCACAAGGAGGTCTCGCAGTCTGAAGTCCACGTGTTCATCACTGTCAAAGAGCTTAACAGTGTCGCCGACGACATCAAACGCCGTCTCGCGAACGCTAACTAA
- Protein Sequence
- MGSFHKDKARSRRVQAQRKFAQGVYLPPTAVAVVTTDTRQSAVQDPNVTINKVSATSLLDTVSMQGLHTHMQPVVLLERLRGNNQSSDAPPRHVPPHLAPPRTAPPRPVPPRLALPRPAPPVYAAPLPPPPLPPPPRPTPQPPPVTLPRPGPNDNAATAMPKPPTPRLLSIRKKDSKRSHSMSLRSRRLSKIEKFKNIVNSCRIARKSMMKRKLPDRTAKVPQPKKRSLADSSIETSSEFSVDDNRPLKYFAKGSSTPKAQEPAQTPPKPSVKLSAARPTGRRAKPAREVITRQCSSEPVAGPSGMKSYRSTPLEKSYNVLQNDIQTWLMSASPDEDIHLRYDDDSEEEAHTSPEIQVPEVQVPGVQVPQVQVPKVQVPQVQVPKVQAPQVQVPQVQAPEVQVPEVQVPEVQVPEVQVPEGGVPEEGVPVTCITQKWRSVQEVINTPQEELDSRCQQCRQCLRIKKLMTLSELLRAQIKIGMPNGTDTEPQNGNEGAESAETTDVSCGDEDQNYLYLDLLPKHDTIMMKLRIHLVHEKELLSVCLIPRNESKENKQEFLLQEQEHLLDQLIETLTFGGDDKNEDQTKRSDSVASVDSIEGSDITLPQDKANEENLTIESRNARQQKLASAKKRVLDNKELQSQQHQETLKQISIIEAQKNNIEKEVNRIQEQVDRLREEKDAAIAHLRTELREKLRAELEADRRIMAEVGGLARTIEKERVAKAMHAGSDGNAPSTSRQTPEGGGLVNAPVFRPTNEEFNDPIEYFEKIWPEAVKFGICKVVPPEGWNPTCSINDNLRFDVTNQYISRLFNRWGPAARELCAIKLCLHQQKVNFARPPLLDGVEVNLPKLYHLVQRHGGLETVINKKRWGKVAEEMKFAKNPVVERKLDLIYVKYLLPYDTLTHQERQEIMRKVEKAWNRKNQKLLDRAMNPLHRQKRMLGLSDTSDDETEDEDTAVAVNEAEDCIMKGAVMNPPKFKRVATNAFENIFGQGSEASAPPPLEQIEEQYWRHVLLGTEHLCVHTAAIDTGEEGHGFTKNRSEAMGRHPWNLKMISQNPRNILRYLGPVLGVTVPTLHLGMLFSTSCWHKDPHTLPWKEYQHLGPTRIWYGIPSEQTDNFRKAVETLSPTSCQNKGLWLSTDIAMIPPQVLREHNVSLSRVTQSAGEFILAFPKAYTCCISTGYTESESVYFAPVSWLANLHEAFQEARESCEPTMFSMEQLLYQIGKDSRTDQPVLAMVQPIYDKMLLDEVTNRQMLQERGLTFVNENSAAARRKRASGAYNARDHDECEYCRATLFLSKVKGLTGKNSSLCLEHALRLMDTGRYGHKEVSQSEVHVFITVKELNSVADDIKRRLANAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -