Hvir011613.1
Basic Information
- Insect
- Heliothis virescens
- Gene Symbol
- Kdm5
- Assembly
- GCA_002382865.1
- Location
- NWSH01001485.1:86999-91108[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-24 1e-20 73.7 0.1 3 89 94 176 92 176 0.93
Sequence Information
- Coding Sequence
- ATGGATAGCAAAAACATACAGAAAAATGCCATGCATAAAAGTGCAGAATTCACTTTCACTCCACCACCCGAAGCGCCTGTGTTTGAACCTACGCCCGAAGAATTCTTGGACCCACTCGGGTATATTGCGAAAATACGTCCTGTTGCGGAAAAGACAggcatttgtaaaataaagccTCCGTCACGCTGGCAGCCACCTTTTTCTTTAGACGTGGACAAATTGAAATTTGTTCCTAGGATACAGAAAGTGAACGAGTTAGAAGCCATAACGCGTCTAAAACTTTTGTTCCTCGAGAAGATTTTAAAGTTTTGGGAACTGCAAGGATCGCCATTGAAAATACCCATGAtcgaaaataaaacattagacTTGTACTGCCTCAAATTTTGGGTTGATGAGGAAGGTGGTTTTGAAGCTTGTAATAGCCCTAAAAAATGGCGTAAGATCGCTAATGCCATGGGTTACAGTCAACACACCAATACTATGAATTTTCTAAGGagcaattatgaaaaaatattgctgccttatgaaatatttgaaaaaagtaaAGCAGATATATTAAAAACTGTCAAGAAGTCTGAGCccaaatttgaaataaaagaagaCGAAGTTGGAAAGCCACAAATAATTGAAATACCAATAGAACGAATAACAAAGATCAAAGTAGaattggattttgatgaagaTAAACCCCacacaagtattaaaaaaactaagaCAGGATCTGATATAAAACCTGATGTTGATAGCTCTAAGAACAAAGTTGAAAGTGAAGAGGTAAAACGCAACAGAGAACTAAGAAGATTAGCCTGTTATGGACCTGGGCCGAAAATGCCTGGACTCAATGATGAAGAGTTTGATATTACAAAGTCAAGGAAGAGGCCCCGTTATGACCTGGACCCTTTGGCAGTGTATCAGTGTGCTATCTGCCAAAAAGACCACAGAGATGATTTGCTTTTAATTTGCAATGGCTGTTCTGACACTTATCATACATTCTGTTTAAGACCTCCATTGAATTCAGTACCTGATGGAGATTGGCGTTGCCCTTGTTGTATAGCTGAGGAGGTCCATAAACCTGCAGAAGCATTTGGGTTTGCTCAAGCAGAAAGAGAATACACATTACAACAATTTGGAGAAATGGCAGATAAATTTAAGTCAGACTATTTTGCTATGTCTGGTCACTTAGTTCCAACAACAGTGGCTGAGAAGGAATTTTGGAGAATCATTTCTTCAGTGGAAGAAGATGTAACAGTAGAATATGGTGCTGACCTTCACTCAATGGATCATGGATCTGGTTTTCCAACAAAATCCTCACTAAATCTTTATCCTGGTGATCAAGAATATGTGGATTCGGGTTGGAATCTAAATAATTTACCAGTACTGGATGGTTCtgttttaagatttattaatGCTGATATATCTGGCATGACAGTGCCCTGGATGTATGTTGGTATGTGCTTTTCAGCATTTTGCTGGCATAATGAAGACCACTGGAgctattcaataaattatttgcatTGGGGTGAGGCCAAAACATGGTATGGAGTGCCTGGCAGTGGTGCTGAAATGTTGGAAAATGCCATGAAAGCAGCAGCACCAGATCTCTTCAAATCTCAACCAGACTTATTACACCAGCTTGTTACAATCATGAATCCAAATATCTTGATGGCTGCTGGGGTTCCAATTTATAGAACTGATCAGCATGCTGGAGAATTTGTAGTTACCTTCCCCAGAGCATATCATGCAGGCTTCAACCAAGGTTATAATTTTGCTGAAGCGGTTAATTTTGCTCCACCTGATTGGCTCAAGATAGGACGGGAGTGTATAACTCACTACAAAAATCTCAAAAGACACTTAACTATCGCTATGATATGGATGAACTGCACATTATGCTACAGACTATAG
- Protein Sequence
- MDSKNIQKNAMHKSAEFTFTPPPEAPVFEPTPEEFLDPLGYIAKIRPVAEKTGICKIKPPSRWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWELQGSPLKIPMIENKTLDLYCLKFWVDEEGGFEACNSPKKWRKIANAMGYSQHTNTMNFLRSNYEKILLPYEIFEKSKADILKTVKKSEPKFEIKEDEVGKPQIIEIPIERITKIKVELDFDEDKPHTSIKKTKTGSDIKPDVDSSKNKVESEEVKRNRELRRLACYGPGPKMPGLNDEEFDITKSRKRPRYDLDPLAVYQCAICQKDHRDDLLLICNGCSDTYHTFCLRPPLNSVPDGDWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFAMSGHLVPTTVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAEMLENAMKAAAPDLFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLKIGRECITHYKNLKRHLTIAMIWMNCTLCYRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00205843; iTF_00176887;
- 90% Identity
- iTF_00176887;
- 80% Identity
- -