Basic Information

Insect: Heliothis peltigera
Gene Symbol: -
Assembly: GCA_958496145.1
Location: OY292351.1:703633-717475[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00037 0.024 15.4 3.2 1 23 212 234 212 234 0.99

2 6 0.029 1.9 9.5 1.1 1 23 252 275 252 275 0.91

3 6 0.00018 0.012 16.4 0.5 2 23 282 303 281 303 0.97

4 6 0.0007 0.046 14.6 0.1 2 19 311 328 311 330 0.95

5 6 6.8e-05 0.0045 17.7 7.8 1 23 343 365 343 365 0.95

6 6 1.5e-05 0.00097 19.8 0.1 1 23 370 392 370 392 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00037	0.024	15.4	3.2	1	23	212	234	212	234	0.99
2	6	0.029	1.9	9.5	1.1	1	23	252	275	252	275	0.91
3	6	0.00018	0.012	16.4	0.5	2	23	282	303	281	303	0.97
4	6	0.0007	0.046	14.6	0.1	2	19	311	328	311	330	0.95
5	6	6.8e-05	0.0045	17.7	7.8	1	23	343	365	343	365	0.95
6	6	1.5e-05	0.00097	19.8	0.1	1	23	370	392	370	392	0.98

Sequence Information

Coding Sequence: ATGCCGATCAATTCGGAGCCCATTACCCTCGACAGTGATGATGAACCGGATCTCGGATCGCCAAGTCAGGCGTCAGATTCATTGAGTTTGGACGAAAATCTCCGAGCTCTGAGGCATATACACGAGAAATATGCTAACATCGACAAGGATGAGCTGTATGACACACATCTGATGGCGGTCAACTTCAAGAAGCCTCTCGACTCGCAGCGGAGAGATGATGACGAGGTGCTCTCCGTGAGGAGTTCAGAAGGCTGCGCTTCTGGCAAAGAAATGGAGACACGCGTCGAGAAACTCGAAGACAGTTCCAACTCTGATTCTGATAGCAGCAGTTCAGGATCTGGCAGTTCCAGTTCAGGATCATCGAGTTCCTCAAGTTCAGACTCATCCAGCTCATCTGAAACGTCAGACAGCGAGTCTGAGTCTGGTGATGACAGACCCAAGACTGAGGCGCCCCCGCCGCCCGTCGCGCACACGCCTAACGATGACGAGAGATCATTCGGCGCGTGGTCGTACAGCGGCCCAGCGTCCGATTCGGATTCGGACCCGGAGCGCGCGGACGTGGCTGACGTCACGTCCGCCCCCCTCTCGCACGACGAGATCAGCGAGAGTGAGAATGAGTCAGCAGACAAAAGCTTCCAATGTCATATATGCAGGAAGTGGTATTCCACCAGAGTGACCCTCAAGATCCATCGCCGCGTGCATCAGAACCGCGGTGGTGGCAATTCGCGATCTCGCGCGCGTTCCTCGGATAGATACGAGTGTGACTGCTGTAGCGAGACATTCAATCGGAGAGAAAAGCTCTGGGAACACAAGGCGGAAGCGCACCGCGGCGCCATGACGGTCCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAGCTCGCCGCGCACAGCCGCACGCACACCGCCGACGAGCGCGCCGGTCGATGCCGGCAGTGCGGGCTGACGTTCCCGCAGTACGAGCAGCTGCGGCGGCACGCGGCCTGCGCGCacggcggcgccggcgccgcgcgcCTCCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCGCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTCTGCAAGGCATCGTTCGCGCGCGCAGATCAGCTGGCGCAGCATCTCAACAGCCATCTCGCGAACTACAAGCGTCTGAAGCCGTGA
Protein Sequence: MPINSEPITLDSDDEPDLGSPSQASDSLSLDENLRALRHIHEKYANIDKDELYDTHLMAVNFKKPLDSQRRDDDEVLSVRSSEGCASGKEMETRVEKLEDSSNSDSDSSSSGSGSSSSGSSSSSSSDSSSSSETSDSESESGDDRPKTEAPPPPVAHTPNDDERSFGAWSYSGPASDSDSDPERADVADVTSAPLSHDEISESENESADKSFQCHICRKWYSTRVTLKIHRRVHQNRGGGNSRSRARSSDRYECDCCSETFNRREKLWEHKAEAHRGAMTVRCEVCRKCFEDDAELAAHSRTHTADERAGRCRQCGLTFPQYEQLRRHAACAHGGAGAARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKASFARADQLAQHLNSHLANYKRLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00018531;
90% Identity: iTF_01065041;
80% Identity: -