Hpel009166.1
Basic Information
- Insect
- Heliothis peltigera
- Gene Symbol
- -
- Assembly
- GCA_958496145.1
- Location
- OY292332.1:1595081-1604423[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.6 1.7e+02 3.3 0.3 2 23 6 27 5 27 0.96 2 14 0.0091 0.6 11.1 0.8 2 23 1003 1025 1003 1025 0.95 3 14 3 2e+02 3.1 0.2 1 23 1101 1123 1101 1123 0.93 4 14 6.7e-05 0.0044 17.8 1.8 2 23 1126 1147 1125 1147 0.97 5 14 0.00014 0.0095 16.7 2.5 1 23 1153 1175 1153 1175 0.98 6 14 0.012 0.76 10.7 3.0 2 23 1182 1203 1181 1204 0.95 7 14 1.2 81 4.3 1.2 5 23 1217 1235 1216 1235 0.95 8 14 0.015 0.96 10.4 0.7 3 23 1242 1263 1241 1263 0.96 9 14 0.29 19 6.3 0.8 3 23 1275 1294 1274 1294 0.96 10 14 0.00068 0.044 14.6 1.2 1 20 1300 1319 1300 1322 0.91 11 14 0.0063 0.41 11.6 1.3 1 23 1330 1352 1330 1352 0.98 12 14 0.003 0.19 12.6 7.5 1 23 1358 1380 1358 1380 0.98 13 14 6.7e-06 0.00044 20.9 1.3 1 23 1386 1410 1386 1410 0.98 14 14 0.0011 0.073 13.9 4.2 1 23 1416 1438 1416 1439 0.95
Sequence Information
- Coding Sequence
- ATGGACCAGCTCGTGCAGTGTCCCGTGTGCACACTGTTCCTCCACAATGGGATCACTCTAGAGTCCCACTTGGACACTCATCCCAAAGACCAGGTCATAAAAGCCTTGTGCAATATAGCATCAAACAAGAATTCTAATTTTGCAAGCAGGACTTCCACACCAGTACATTCTGAGCGGTCATACAGGAGCAGGTCACGGACACCTGCTACTGATGATAGCACCAAGTGGACGGGATCTCGGAGTACAGAACATGACCGCTACTGGCGTCGAACACCTAGCAGAACACCTAAGAGTACAGCTCCATCTAGAAATGGCACACCTGATATTAGAATGCTTGATGTAAACTTTGAAAACCATGGCCTTGCTGGTACAGGTGCTGGTCAACATATAAACAACCCATTTCTGTTAAAAGCTGATAAACTTCAGCAGACCTTCCAGTCACCTGCCATACCAGATTTTGATCCACAGTTTGTTTACTACCCAGAGCAACAGGAGGATAGAGAGATAAAATTTTCCCGTAGTGCTGAGTACAATGCAATGGACAACagcaacaatttattttcttataatgtACCAACTATGGCCGGGCCAGGTGTGAAATTGTTACCAGCAATGCCTAGAAAAGCAAATGACCTTGTCAAAGTTCTACCTAAACCAAATAACATACTTCTTAAGGCCAACATGGGTGGTGTGCAATATATAGGTCCGGGGGTCAAACCCATGCACGTTGTGGTACCATCAGCTCCCACATTCGTGCAGAAGAATGTGCAAAACAATATGATTATGACAGGCAGTGGTCCCACCCCACAGATGCACATTGATACCAAAACAGCTTCACCTCCTTTAGCTAGCAATCAACTGAACCAAATGACTTCTGGTGCATTTACTCCAGGAACTACTGTTGTTACCCAAAACTCCCAAATTATTTACAGAGAAATGGTGCACAATATAGATGGTAAGCCCTTTATAACTACCATGCCGACAGTCCTAGGTGGCCATGAGAATGTCACTAACTTAGCCCAAGCTAGCTCCATGTACCAGAATGTAATGGTTGTAGACCAGTTTGGAAACACTTCATGTATGTACACAACGCCTCAGCAAATGATGAACAAAGCATGTCCTACTTCCATGTATAATGAACCTGGGAACCTGATGCCTAGTGTACACATTGACAAAACTGTACCAAACATGAGTGATCCTAAAACACTTATTATTGAGGTAGGTCCACTTATTGCCCCAggtcatgaaaatatttgtgaggATCCAAGTTCCTCCATATCTGGACAGCCAGTCCAGAGCAGTTCAGTTGATAATACTGAAAGACCTGTAGAGATATTGGACTCAAAATTTGATATTCCAGGAGGAACTAAAGGtctgaaaattttaagtaaCATTAAGGTTGAAGTTCCAGTGCAACATCATAAGAATATGGTGAACACAGTCATGGATCTGACAGGCACCACTGAGGCTGAGTATCCTGTAGAGCGAGTAGATACCCCAGATAAGATCCTGCCTGATTTAGATGATAACAACCAATTATCATACGATGACACCCAGCCGTCATCTATGTCGAGTGGTGACAGCATGGTCTCACATACTTTCTCTGTGATTAAGAATGTTGGCAACCCAAGCAAGAGTTCTGTGGACAACAAGCTGGATACTGACTTTTCTGACAGCTGTCCTGTGCCAGATTTAATATGTAATGAGAAGCCTTCCATATCACCATGTAGTGAGTTGTCAGAAAATGGCGATAATTCAACCGATCGTACCTCAATGTCTCCTAAGCCCGAGAGTAATCAAGTTAGCCTTAGTAACATAGGACttccagaaaataaaaatcagcTCTCACAAAAACCTTACAGGCACAACACACTAAGACTGAACAATATATTTGTGAAGAAGCACAAGAAAATTCTGCAAATTAAGAATGCCAAGTCATTCTCCGTGAGCACTACAAAAAAGCCAGAACAAAGAGATAGTGTCCCGACATCATCAACTTGCAGATCACCAGAAAATTTTACCATGAATAAATTGCACCAAACAGATAAAGCTGATAGCAAGGAGAAGACTAACCTATTGCAGACCATATCTGTTGAAGAGATCAAGGacaatgatgataataatgactttgatgatgatatagaAGAACAATCCATGGACATTGAACCAGTAGCTGCAGCCAGTTTAGCTCAGCCTGAGTTTGCTGCCAGCATTGATATGATACAAGTGAAGGAggaaataaatacaagtaaTGAAGGAGGGTTCAGTAACGAGCCAGTGACTACAGACCGCATGCTAACACCGCTGGAGACATTGCGACCCATTAACGTTATTAGCTACGGCAATATGTCCAACGAAGATTTTAACGAAGAATCTAATGACAGGGAGTTATTGGACCTTGAAGCGGCCTCTAAAAACAAGCAGTTTGTCAGCATGATGAACGAGAATTACTTCGGAGACAATATTTACGCAGACTACTTTACTCCTGACCGCGTGGAAGCGTTCGACGCCGAGCGCGACGCCGCGGGGTTCAAGGAGGGAGGCAAAGATGGTATGTACCTCTGGGGTGAGCCTTCACAGAAAGACAACGAGTTCGTACTGCCTAACTTTATACACGAGAGTTACAAAATAGCTGAGAGTAATGGCATAGATTATTCTGAGCTAGGTGCTAGAGACGTGCAGGTAGACGTGGAGGTGGACGGGTGCGAGCGGGACAGCAAGGCCGACGTGCTGAGTGAAGGCCGCAGCGAGGGCGACGCGCCTATGAACATCTGCGCCGACGAGTGCATGCCGCCGCGCGGTGAGCTCAGCGGGCAGGAGAGCAACGGGGATATGGAGTCGCCATGGAGCGGGATGTACACAGAGGTGACGGCAACGGAGCCCTACGACCTGATCGCCCGGGAGAGCTGGGTGTCGGACGGCTCGGAGGCGGACGCGAACGAGAAGAGGGAACCCATCGAGGAGGAGCTAGCATTACCGTTACCGGCGGTGTTCGGGCGCGCTCGCACGTGCGGCACGTGCGGCGTCACGTGCACGTCCCTGCGCGAGCTGCGCGCGCACCGTGCGCGGGCGCACGCGACCGCCACCACCAAGACTACGTACAGCCGCCTCGTCACCGCCAGGAGTATTAAAAAGGAGGAGAAGCCTGATACCAACAACCTTCTGCCAGCAATCGACTCAAAGGACTCGATATCATCGACAATACTGCAAGTGTACGAGAGCATCCAAGTTGAAGAGGCCAAGCCTAAGATCGAAGTAGACAGACTTATCAAGCAAGAAGTGAAACGTAGGCGGAAGGACTATGTCTGTCCTACGTGTAAGGAAGATCAAGTGACCGATGCTGCGTTCCACGCGCATCTTAAGATACATCCCCTCGAGTGTCTCACGTGTGGAAAGTGCTTCTTCAAGAGAGCGAACCTGGCCCTACATATAAAGACACATTTAGGAATTAAGAATTATAAATGCGACGTGTGCGAGAAGCGGTTCGTGACGCGCCAGAAGCTGATGGAACACCACAACGTGCACACGGGCCGCGCGCCCGTCAAGTGCACCATGTGCGACGACACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGGATCGGCACCACCTGGCGAAGCGCGCGAAGGTGCGCGACTTCGTGTGCCAGTGCGGGCTGGTGCTGCACTCGCGCGCCAAGCTGCGCTGGCACCAGGAGACGCACGCGGCGCGGCCGCGCGCCTGCCTGTACTGCAGCGACAAGTTCGTGCACGCGGCGTCGCTGACGCGGCACGTGCGGCGCGCGCacgcggcggcgggcgcgcgcgGCGACAGCGTGGCGTGCCCCGTGTGCAAGCGGCTGTACCTGCGCGCCAACCTGCGCGCGCACCTGCACACGCACAGCGGCGCGCGGCCGCACGTGTGCGTGGTGTGCAGCAAGGCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACATGAGCCGCTCCGCCAAGCCCTACAAGTGCAACCTCTGCAAGGGCGCCTTCATCCGCCACACCGAGTACGTCTCCCACATGAACGCGCACAAGTCCGTCCGGCCCTACACCTGCAACTACTGCGGCTGCCGGTTCATCCGCAAGTACAACTGCCAGCGGCACGTGCGGGAACACGAGATGGCCAAGAAGTACGTGTGCAAGGTGCCCGAGTGCGGTAAGTCGTTCCACAGGAGCTACTACCTGTCCGAACACATGAAGGTGCACAGCGGCGTTCGCCCCTTCGCGTGCAACATCTGCGGCAAGACTTCCAGCAACAAGTCCAACCACAACAAGCACGTCAAGATCCACCACGCGCGGGAGCCCGTCGCTACTGAAGCGTAA
- Protein Sequence
- MDQLVQCPVCTLFLHNGITLESHLDTHPKDQVIKALCNIASNKNSNFASRTSTPVHSERSYRSRSRTPATDDSTKWTGSRSTEHDRYWRRTPSRTPKSTAPSRNGTPDIRMLDVNFENHGLAGTGAGQHINNPFLLKADKLQQTFQSPAIPDFDPQFVYYPEQQEDREIKFSRSAEYNAMDNSNNLFSYNVPTMAGPGVKLLPAMPRKANDLVKVLPKPNNILLKANMGGVQYIGPGVKPMHVVVPSAPTFVQKNVQNNMIMTGSGPTPQMHIDTKTASPPLASNQLNQMTSGAFTPGTTVVTQNSQIIYREMVHNIDGKPFITTMPTVLGGHENVTNLAQASSMYQNVMVVDQFGNTSCMYTTPQQMMNKACPTSMYNEPGNLMPSVHIDKTVPNMSDPKTLIIEVGPLIAPGHENICEDPSSSISGQPVQSSSVDNTERPVEILDSKFDIPGGTKGLKILSNIKVEVPVQHHKNMVNTVMDLTGTTEAEYPVERVDTPDKILPDLDDNNQLSYDDTQPSSMSSGDSMVSHTFSVIKNVGNPSKSSVDNKLDTDFSDSCPVPDLICNEKPSISPCSELSENGDNSTDRTSMSPKPESNQVSLSNIGLPENKNQLSQKPYRHNTLRLNNIFVKKHKKILQIKNAKSFSVSTTKKPEQRDSVPTSSTCRSPENFTMNKLHQTDKADSKEKTNLLQTISVEEIKDNDDNNDFDDDIEEQSMDIEPVAAASLAQPEFAASIDMIQVKEEINTSNEGGFSNEPVTTDRMLTPLETLRPINVISYGNMSNEDFNEESNDRELLDLEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEAFDAERDAAGFKEGGKDGMYLWGEPSQKDNEFVLPNFIHESYKIAESNGIDYSELGARDVQVDVEVDGCERDSKADVLSEGRSEGDAPMNICADECMPPRGELSGQESNGDMESPWSGMYTEVTATEPYDLIARESWVSDGSEADANEKREPIEEELALPLPAVFGRARTCGTCGVTCTSLRELRAHRARAHATATTKTTYSRLVTARSIKKEEKPDTNNLLPAIDSKDSISSTILQVYESIQVEEAKPKIEVDRLIKQEVKRRRKDYVCPTCKEDQVTDAAFHAHLKIHPLECLTCGKCFFKRANLALHIKTHLGIKNYKCDVCEKRFVTRQKLMEHHNVHTGRAPVKCTMCDDTFRRYSNMVQHRDRHHLAKRAKVRDFVCQCGLVLHSRAKLRWHQETHAARPRACLYCSDKFVHAASLTRHVRRAHAAAGARGDSVACPVCKRLYLRANLRAHLHTHSGARPHVCVVCSKAFTTKWNLKLHRWTHMSRSAKPYKCNLCKGAFIRHTEYVSHMNAHKSVRPYTCNYCGCRFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGVRPFACNICGKTSSNKSNHNKHVKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00908225;
- 90% Identity
- -
- 80% Identity
- -