Hpel019684.1
Basic Information
- Insect
- Heliothis peltigera
- Gene Symbol
- -
- Assembly
- GCA_958496145.1
- Location
- OY292350.1:2409527-2413199[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.27 18 6.4 1.1 1 23 96 119 96 119 0.97 2 17 0.075 4.9 8.2 0.1 2 23 146 168 145 168 0.95 3 17 0.051 3.3 8.7 3.2 2 23 191 212 190 212 0.97 4 17 0.00039 0.025 15.4 0.1 1 23 216 238 216 238 0.97 5 17 2.1 1.4e+02 3.6 1.1 1 23 243 266 243 266 0.90 6 17 5.5e-05 0.0036 18.0 2.0 2 23 303 325 302 325 0.96 7 17 5.6e-05 0.0036 18.0 1.2 1 23 331 353 331 353 0.98 8 17 0.46 30 5.7 0.1 1 23 427 450 427 450 0.92 9 17 0.008 0.52 11.2 0.2 2 23 477 499 476 499 0.94 10 17 0.012 0.78 10.7 1.9 2 23 522 543 521 543 0.97 11 17 0.82 54 4.9 0.5 1 23 547 569 547 569 0.84 12 17 0.011 0.69 10.9 3.4 1 23 574 597 574 597 0.96 13 17 0.66 43 5.2 3.0 2 23 605 627 604 627 0.85 14 17 5.6e-05 0.0037 18.0 1.2 2 23 635 657 634 657 0.96 15 17 0.0044 0.29 12.1 1.0 1 23 663 685 663 685 0.97 16 17 2.6e-05 0.0017 19.0 3.6 1 23 691 713 691 713 0.99 17 17 8.8e-05 0.0057 17.4 4.3 1 23 719 742 719 742 0.98
Sequence Information
- Coding Sequence
- ATGAGACAGACAAATACGGCTGAAATACGTCGAAATGAAGCAACAGATTATGCCAGGAAAATACTGGACCGGACCAAAGAGGTAACTTCCAAATTAGTCACAGACACTAAATTAAAAGCAGCCGGAAAGACCAAGACAACTCAATCAGAGAACGATGAAGGAAACAACCAAATTAAGAAGACAAGCCAAATTTTGCGTGAAGAAGAATTGTTTAAACATCGCTATAATATTCGAGAGATTCTTCTCTGTAGTAACGCTACTCCAATCCGCAAATATGATTTTGGATATGTGTGCTGTTTTTGTACGAATAATTATCCCGAAGCTAAAGACTTAAAGGAGCATACAATCACGGAACACGATCAAGATACCAAATTGGACTTCATGAAGAAAGAACGAATGCAGCATTTTTTAGTGAAACTTGATATAACGGGTCTCAAATGCACGTTGTGCGAAAAAGGCTTACCTTCTGTTGAAGATCTCTTAGAACACTTAAAGAATGAACATGATAAGCCAATGTTCACTGATATTAAAAGCCACATTATCCCTTTTAAGTTTGAAGACTCCAAGCTTAAATGCACTTTCTGTTCACATATTTTCGACAGGTTCAAGGTGCTTCAAGAGCACATGTACACCCATTACGATAACTTCGTTTGCGAGGTCTGCGGCACTGGTTTCGTTAATGAGAGAATGCTAACAACCCACAGTTTAAGCCATAAAGTTGGAATTTTCACCTGCAGACTATGCAATGAAGACTTTGACACGATACAAAAGAAGAGGTACCATGAAAAGATTGTTCATCTACTGTCCTTGAACAAGTGTGGGTATTGCAGCGAGAAATTTATGTGGTACCCGCAGAAGTGTGCGCATATGGCTGAGGTACATGGAATTGAAATACTAAAGCCCAAGGAATGCAATGCGTGCAACAAAGTCTTCCCAACGAAGCATAAACTGCAGCTGCATATAAGAAGGGACCATTTGCTCGAAAGAAGGTTTAAATGTAAAGAGTGTGAGATGGAATTTTTCACCAAAGCGTTACTGACCAATCACATGGTTAAACATACTGGGGTCAAGATGTTTCCTTGTAAAGTGTGTAGTGTTCAACGTAACGTGAACGCCCAGATTGAAATGGGTAACAGCAAAAAAGTCACACGCACTCGAAGAAGAATCCAAGAGCCTAAGGatgtcaaaattaatgaaatcagCAAACATAGAAGTAATATACATCTCATACTGCAGTGTACCAACGCCACCCCCATACGATGCAGAGGGGGCATCGGATACGCTTGTAGTTTTTGCGCAGACGAATACCCAGACCCTgcagatttaaaaaaacatactctCGAAAATCACGACGATAAAGCCAAACTAAAATTCATGGCTGGCAAAATGATGTTCTCTTACCTCGTAAAATTAGACATCACTGACCTTAAATGCAAAATTTGTGACGAAAAATTTGACACTCTAGAACTTATTGTTGatcatttgattaaaaaacacGATAAAAAGATGTTTACTGACATCAAAAACCATATAATGACCTTCAAATTCAGTGACGATGCACTGAAATGTATGTTTTGCCAAAACGTTTACTACAAATTTAAGAATCTCCAACAACATATGAACGTACATTACAGGAATTTTGTGTGTGAATTCTGTGACGCTGGATTCATTAACAAGAACGTACTAACTTGCCACGTGGAAGGGCATAAGACTGGGACATTTAAATGCGATCTCTGCCCCAAAGTTTTCGATACCCATAGAAAGAAGAAAAGCCATGAAAAATCCGTTCACATTCACGCGAATTTGCTCAACAAATGTGGGTACTGTCACCAAAAATTCACTAACTACAAGAAAAAGGATGAGCACTTAGTGAAAGTCCACGGTGTCACCATGAAGACTATTAGGTGCCACGCCTGTGATAAGACTTTTGACAACAAGGGTGCTCTGAACGTTCACACAAAGCGAGACCACTTGATGGAAAGAAAACACAAATGCACGGAATGCGAAATGGGATTCTTCTTGCCGAACGAATTGAAACTCCACATGGTCAAGCATACAGGAGAAAGGACATTTAAGTGTTCAGTCTGTTCGAAGTCTTATGGTCGGCATAAGACTTTGAGGGAACACATGAGGATCCATAATGATGATAGGCGCTTTAAGTGTGAACATTGTGGTCAAGCGTTTGTGCAAAAATGCAGTTGGAAAGGGCACATGAGAAGTAGGCACGGGGAACTTGTATGA
- Protein Sequence
- MRQTNTAEIRRNEATDYARKILDRTKEVTSKLVTDTKLKAAGKTKTTQSENDEGNNQIKKTSQILREEELFKHRYNIREILLCSNATPIRKYDFGYVCCFCTNNYPEAKDLKEHTITEHDQDTKLDFMKKERMQHFLVKLDITGLKCTLCEKGLPSVEDLLEHLKNEHDKPMFTDIKSHIIPFKFEDSKLKCTFCSHIFDRFKVLQEHMYTHYDNFVCEVCGTGFVNERMLTTHSLSHKVGIFTCRLCNEDFDTIQKKRYHEKIVHLLSLNKCGYCSEKFMWYPQKCAHMAEVHGIEILKPKECNACNKVFPTKHKLQLHIRRDHLLERRFKCKECEMEFFTKALLTNHMVKHTGVKMFPCKVCSVQRNVNAQIEMGNSKKVTRTRRRIQEPKDVKINEISKHRSNIHLILQCTNATPIRCRGGIGYACSFCADEYPDPADLKKHTLENHDDKAKLKFMAGKMMFSYLVKLDITDLKCKICDEKFDTLELIVDHLIKKHDKKMFTDIKNHIMTFKFSDDALKCMFCQNVYYKFKNLQQHMNVHYRNFVCEFCDAGFINKNVLTCHVEGHKTGTFKCDLCPKVFDTHRKKKSHEKSVHIHANLLNKCGYCHQKFTNYKKKDEHLVKVHGVTMKTIRCHACDKTFDNKGALNVHTKRDHLMERKHKCTECEMGFFLPNELKLHMVKHTGERTFKCSVCSKSYGRHKTLREHMRIHNDDRRFKCEHCGQAFVQKCSWKGHMRSRHGELV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -