Basic Information

Insect: Heliothis peltigera
Gene Symbol: -
Assembly: GCA_958496145.1
Location: OY292350.1:2169635-2172627[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.071 4.7 8.2 2.1 1 23 28 50 28 50 0.95

2 15 0.013 0.82 10.6 0.3 2 23 78 100 77 100 0.94

3 15 0.0007 0.046 14.6 6.5 2 23 124 145 123 145 0.97

4 15 0.0097 0.63 11.0 0.2 2 23 149 170 148 170 0.96

5 15 4.2 2.7e+02 2.7 0.5 1 16 175 190 175 192 0.82

6 15 0.29 19 6.3 1.0 1 23 259 281 259 281 0.95

7 15 0.058 3.8 8.5 0.6 2 23 309 331 308 331 0.93

8 15 2.2e-05 0.0014 19.3 1.1 1 23 354 376 354 376 0.97

9 15 0.099 6.5 7.8 0.6 2 23 381 402 381 402 0.95

10 15 5.9e-05 0.0038 17.9 1.0 1 23 407 430 407 430 0.95

11 15 0.13 8.4 7.4 2.8 2 23 440 462 439 462 0.93

12 15 0.0011 0.071 14.0 1.6 1 23 468 491 468 491 0.97

13 15 0.0034 0.22 12.4 2.1 2 23 496 517 495 517 0.96

14 15 1.9e-06 0.00012 22.6 4.3 1 23 523 545 523 545 0.98

15 15 0.00042 0.027 15.3 0.3 1 23 554 577 554 577 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.071	4.7	8.2	2.1	1	23	28	50	28	50	0.95
2	15	0.013	0.82	10.6	0.3	2	23	78	100	77	100	0.94
3	15	0.0007	0.046	14.6	6.5	2	23	124	145	123	145	0.97
4	15	0.0097	0.63	11.0	0.2	2	23	149	170	148	170	0.96
5	15	4.2	2.7e+02	2.7	0.5	1	16	175	190	175	192	0.82
6	15	0.29	19	6.3	1.0	1	23	259	281	259	281	0.95
7	15	0.058	3.8	8.5	0.6	2	23	309	331	308	331	0.93
8	15	2.2e-05	0.0014	19.3	1.1	1	23	354	376	354	376	0.97
9	15	0.099	6.5	7.8	0.6	2	23	381	402	381	402	0.95
10	15	5.9e-05	0.0038	17.9	1.0	1	23	407	430	407	430	0.95
11	15	0.13	8.4	7.4	2.8	2	23	440	462	439	462	0.93
12	15	0.0011	0.071	14.0	1.6	1	23	468	491	468	491	0.97
13	15	0.0034	0.22	12.4	2.1	2	23	496	517	495	517	0.96
14	15	1.9e-06	0.00012	22.6	4.3	1	23	523	545	523	545	0.98
15	15	0.00042	0.027	15.3	0.3	1	23	554	577	554	577	0.95

Sequence Information

Coding Sequence: ATGACCATATCAGAGAGACAGAACGCGGCAACATTTCTAGAATTTACTACAATCAAGCCGTTTTTTTACCAACAAGCCAATTTCAAATGCTTCTACTGCAACGAAGTGTTCCCCGAAATACATTCAGTGTTGCAACATACAAACTTCCATGTTACCCCAGAAAGATGCTGCTTACTGAAACAGTATCTAAGAAAAGGGAAGAGAGTAATCAAAGTGGATATATCAGGACTCAAATGCAGGCTTTGCGAGCAAAAATATTCCGATCTCGACGATATTAGGAAACATCTCACAGTAGCCCATAAGAAAGAATTTAATTCGGCGGGAAATGGATTGATGGCGTATAATTTGCACACAGACAACGGGCAATTAAGTTGCCATAAGTGTTCTAAAACCTTTCATTCCTTTTTCCTTCTAAACCGACATATGAACGTACATTTCAGCGTGGTTTGCGAAATCTGTGGCCTAGGCTTCATGTCACACCAAAGACTTATAAATCATAGAATAGTGCATCAGTCAGGCGTTCACAAATGTGATAAATGTCCTGATGTGTTCCAAACTAAACTGAAGCTAAGACAAGAGTATCTTGTAACACGGATAGACAATCTGATTGGAAAACCATTAAAACCTGAACATTTTATCTCCCCAGGCACTGAACTGAAGAAACGACAAGGAGCTTTAACCAGTATATGGGAACTGACGCTATCAGAACGTCAGAACGCCTCAATACTTCTAGAAAGCACCACAGCAACACCCTTCCTCTACTGCAGATACtatttcaaatgtttcttCTGCGGAGAACAGTATTCAGAAATAAAGACAGTCCTTCAGCATACGGTCACACATGAAACTCCAGAAAGTTCTGTAATACTCAAAAAATATCTCCCAAAAGGCAAGCGAACAGTCAAAGTGGATATTTCAGAATTAAAGTGCAGAATTTGCGATACAAAACTCAAAGATTTGGATGAAACGCGAAAACATTTGACTTTAGAACATAATAAGGTTTTTACTGAATCTGGAAATGGTATAGTAGCTTACGATTTGACTTCGAAAAACGGCCAGTTTAATTGTTATATCTGCAACAAAGTCTTCCAAACGTTTATACTGTTAAACAGGCATATGAACGTGCATTTCAGTAATGCTGTCTGTGAGACTTGTGGGGCGGGGTTCATGACGCACCAACGGCTAATGCAGCATAAAGAAATCCATTTCCCTGGAGGCTATCCTTGCAGCAAATGTAGCAAAGTATATACAACGAATTCTAATCTCAAATTTCATATAGAGAAAGCTCACGAGGGGGCGACGAAGATGCGTATGCTGAGATGTCCTCACTGCCCTGAACGGTTTGTAGAACACTTCAAAAAGTTGAAGCATTTGAAGGAAGCTCATGGTATTACGTTCTCGTTTGAATGTGAGGTGTGCCATTCTGTGTTCCCAAGCCGCAGAGCTCTGACAatgcacacaaataaatttcattcGGAGAAAACTCAGTGTGAAGTGTGTAAAAAGGGCTTTAGTTGTATCTCTACTTTGAAGAAACACATGGTAATACATACTGGGGAGAGGAATTTTGTTTGTTCTCTATGTCAAAAAGCGTATAGACATCAAAAGAGTTTGAAGCAACATATGAGAACGCATGTTCAGGGTGACCagttcataaaatttaattgttcCGAGTGTGGTAGTGGGTTTCCTAATAGAAACGACTTTAACAGGCATGTTAAGGAATGGCACCCGAGAGCTTATTTCGACTATTCTGTTAATTGA
Protein Sequence: MTISERQNAATFLEFTTIKPFFYQQANFKCFYCNEVFPEIHSVLQHTNFHVTPERCCLLKQYLRKGKRVIKVDISGLKCRLCEQKYSDLDDIRKHLTVAHKKEFNSAGNGLMAYNLHTDNGQLSCHKCSKTFHSFFLLNRHMNVHFSVVCEICGLGFMSHQRLINHRIVHQSGVHKCDKCPDVFQTKLKLRQEYLVTRIDNLIGKPLKPEHFISPGTELKKRQGALTSIWELTLSERQNASILLESTTATPFLYCRYYFKCFFCGEQYSEIKTVLQHTVTHETPESSVILKKYLPKGKRTVKVDISELKCRICDTKLKDLDETRKHLTLEHNKVFTESGNGIVAYDLTSKNGQFNCYICNKVFQTFILLNRHMNVHFSNAVCETCGAGFMTHQRLMQHKEIHFPGGYPCSKCSKVYTTNSNLKFHIEKAHEGATKMRMLRCPHCPERFVEHFKKLKHLKEAHGITFSFECEVCHSVFPSRRALTMHTNKFHSEKTQCEVCKKGFSCISTLKKHMVIHTGERNFVCSLCQKAYRHQKSLKQHMRTHVQGDQFIKFNCSECGSGFPNRNDFNRHVKEWHPRAYFDYSVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01539006;
90% Identity: -
80% Identity: -