Basic Information

Insect: Heliothis peltigera
Gene Symbol: -
Assembly: GCA_958496145.1
Location: OY292334.1:3193129-3196383[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.7e-05 0.0017 19.0 2.8 1 23 246 268 246 268 0.98

2 10 0.00015 0.0095 16.7 1.9 1 23 274 297 274 297 0.95

3 10 1.9e-05 0.0013 19.5 0.3 1 23 307 329 307 329 0.98

4 10 0.0017 0.11 13.3 4.3 1 23 336 358 336 358 0.97

5 10 6.7e-05 0.0044 17.8 0.5 1 23 392 415 392 415 0.95

6 10 0.0061 0.4 11.6 1.3 2 23 421 440 420 440 0.96

7 10 5.7e-06 0.00037 21.1 1.1 1 23 446 468 446 468 0.97

8 10 9.3e-05 0.0061 17.3 1.8 1 23 474 496 474 496 0.98

9 10 2.8e-05 0.0018 18.9 0.9 1 23 502 525 502 525 0.97

10 10 0.3 19 6.3 0.3 1 22 531 552 531 552 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.7e-05	0.0017	19.0	2.8	1	23	246	268	246	268	0.98
2	10	0.00015	0.0095	16.7	1.9	1	23	274	297	274	297	0.95
3	10	1.9e-05	0.0013	19.5	0.3	1	23	307	329	307	329	0.98
4	10	0.0017	0.11	13.3	4.3	1	23	336	358	336	358	0.97
5	10	6.7e-05	0.0044	17.8	0.5	1	23	392	415	392	415	0.95
6	10	0.0061	0.4	11.6	1.3	2	23	421	440	420	440	0.96
7	10	5.7e-06	0.00037	21.1	1.1	1	23	446	468	446	468	0.97
8	10	9.3e-05	0.0061	17.3	1.8	1	23	474	496	474	496	0.98
9	10	2.8e-05	0.0018	18.9	0.9	1	23	502	525	502	525	0.97
10	10	0.3	19	6.3	0.3	1	22	531	552	531	552	0.94

Sequence Information

Coding Sequence: ATGGCTAATGTAAAGAGTAGACTAAAAGCACCCAAAGGTGCAACCACGAAGAAGAAAAAGACGGGGCtaagtaaagtaaaaaaatcctCGACAGGTCCCAAACATTCTGAGTTGAAGAATGACAGTAATGTGGTCATGAGGAGGCCGAGCAACCGCAAGGTCTTGACGGCTGATGAAAAAGTTAAATTCTTATTGAAAAATGGACATAAGCTCAAGGAGAAGTTTATTGCCAAACCACCAGTGAATGTAAAGCCTCTACCGCCTGTTCAGACACCAgacattttgaagaaaaaacatGACAGCAACCTTCCCATGATAACAAAAAGCGGTCACCTCAAAAAGAATTCTAAATGCAATATGAAACTCATTGACAGTATATTGAAGAATGAACTGATGATCAACGATAGAGGTAATGCTAAGACCAAAGATGATGCAGCCGCTGCAGTGTTGCCATCAACTCTGCCAGTAGGCGTGAACAATAACAATGATACGGCAATAACGGACCAAAACAATACATTTCATGACTTCTCTGATGAAGGTTCTGAATGTAAACTCTCGGATGACGTCTCCGCTACATCCAATGAGATTTCTGATGAAGAAGAATGTTCAGACAATTCGGAGGGAAAAGctacaaataaatctaaaaataataaaaagaaggCCGATTCAAATAAGAAAAAGCTGAGTGCAAagcatattaaattaaaaaatggagtgGTGCTAAGTTTAGCCAATTTTGAATGTGATTATTGTAAGAAGACATTCAACAAGAAAGCTTCAATACGCAGCCACATGTACACACATCTTGGTATAAAGCAATTCCGTTGTCCACATTGCCCAAGAGGGTTCAAGAGCCGCACCAAATTGCAAGGTCACGTTGACCGCACCCACAAGCCACTTGCCGAAGATcctgaaatttttatttgcaattatTGTGACAAACCATTTCttgataaagaaaatttgaagGAACATCTTGCTACACATGGTCAAAGTGAAAATCCTTTTAAATGCATCTattgtaataaagttttttcttaTCACACTCTGTTGATGCAGCATGAGAGAAAACATATGGTGAAAGGCCGCCATGAGTGCACTCTCTGCAGTATGTCGTACCGCTGTCGCAACCGTCTCTATATGCATGTCAAAAGCCATCTGAAAAtcaaagattttgtttgtcagTATTGCGGCAAAGAGTTTCTAAGACAGAATTCACTTACAAGACATGTTGAGGTCAACCATGGGGGGCACAGGATTGTGTGTCCCATCTGCAAGAAGAATTTGAAAGGACATTTGACTGAGCATATGCGGACACATGAGAAGAAGCGTCCGCATGTTTGTCCGGAGTGTGGACAGCGGTTTACTCAGTCCACACAGATGAATGTGCACCGGCGCGCGCACACTGGTGCGAGGCCGTACCCTTGTCGCATATGCAAGCGCCTCTTCTCTCACTCTAACGCTCTAATGTTGCATATTCGTCGTCACACAGGCGAGAAGCCGTTCCCCTGTGCGATGTGCCCAATGTCCTTCTCTCAGCTACCGCACATGAAAACACACATGCGCAAAATACATGGCAAAGAGAACCCATACAAATGTGCTATGTGTAATTCCTTCTACAAGCTCAAAGCACAGCTTGATGTCCACGAGAAGACTTGCTCAGCAGGAACTGCTACCAAACCTGAACCCAaaggtaaaaagaaaaaatcgaAGAAAGGTGACGAGGAGATAGAAGTGGAGGCGCCGATGTCTCTCTCTCGCATGAGGTTCCTGCTCGCACTCCTCCTCACGATGATCGCTACCAAAGAAAAGCTCAAATACTTAGGTTTCAACAAACGGCTCGTGGATGAGATCCTTATAGAGTCCCTGGAGGCCATGAGCCAGACTCCTTGCAAGGACGAGTCCCTCCCCCCAGTCAAACGTCTGCGTAAGAACATAGAAATGCTGCTCATAGGGACCGTGCCCAAAGACCAGATGGAGAACTTTAAAAAGGAGAATAAGTCCACGGAAGATATCTTGGAGCTGCTGACGAACGAGAAAGATAAATGA
Protein Sequence: MANVKSRLKAPKGATTKKKKTGLSKVKKSSTGPKHSELKNDSNVVMRRPSNRKVLTADEKVKFLLKNGHKLKEKFIAKPPVNVKPLPPVQTPDILKKKHDSNLPMITKSGHLKKNSKCNMKLIDSILKNELMINDRGNAKTKDDAAAAVLPSTLPVGVNNNNDTAITDQNNTFHDFSDEGSECKLSDDVSATSNEISDEEECSDNSEGKATNKSKNNKKKADSNKKKLSAKHIKLKNGVVLSLANFECDYCKKTFNKKASIRSHMYTHLGIKQFRCPHCPRGFKSRTKLQGHVDRTHKPLAEDPEIFICNYCDKPFLDKENLKEHLATHGQSENPFKCIYCNKVFSYHTLLMQHERKHMVKGRHECTLCSMSYRCRNRLYMHVKSHLKIKDFVCQYCGKEFLRQNSLTRHVEVNHGGHRIVCPICKKNLKGHLTEHMRTHEKKRPHVCPECGQRFTQSTQMNVHRRAHTGARPYPCRICKRLFSHSNALMLHIRRHTGEKPFPCAMCPMSFSQLPHMKTHMRKIHGKENPYKCAMCNSFYKLKAQLDVHEKTCSAGTATKPEPKGKKKKSKKGDEEIEVEAPMSLSRMRFLLALLLTMIATKEKLKYLGFNKRLVDEILIESLEAMSQTPCKDESLPPVKRLRKNIEMLLIGTVPKDQMENFKKENKSTEDILELLTNEKDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00783790;
90% Identity: -
80% Identity: -