Hpel019691.1
Basic Information
- Insect
- Heliothis peltigera
- Gene Symbol
- -
- Assembly
- GCA_958496145.1
- Location
- OY292350.1:2465255-2467048[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.012 0.79 10.7 2.0 1 23 32 54 32 54 0.98 2 16 0.41 27 5.9 0.0 2 23 82 104 81 104 0.89 3 16 0.00021 0.013 16.2 0.6 2 23 125 147 124 147 0.97 4 16 0.001 0.067 14.0 3.4 1 23 152 174 152 175 0.95 5 16 0.001 0.065 14.1 3.0 1 23 179 202 179 202 0.93 6 16 0.059 3.9 8.5 1.0 2 23 205 227 204 227 0.96 7 16 0.59 39 5.4 1.5 2 22 233 253 232 256 0.89 8 16 0.01 0.65 10.9 1.8 1 23 300 323 300 323 0.93 9 16 0.47 31 5.7 0.2 2 23 352 374 351 374 0.95 10 16 0.53 35 5.5 1.6 1 23 396 419 396 419 0.92 11 16 9.8e-05 0.0064 17.2 0.5 1 23 424 447 424 447 0.95 12 16 7e-05 0.0046 17.7 0.1 2 23 454 476 453 476 0.94 13 16 1.4e-05 0.00093 19.9 0.6 1 23 481 504 481 504 0.97 14 16 0.00094 0.061 14.2 4.1 1 23 508 531 508 531 0.97 15 16 0.06 3.9 8.5 0.8 2 23 538 559 538 559 0.96 16 16 0.0085 0.56 11.1 1.6 1 23 565 587 565 587 0.96
Sequence Information
- Coding Sequence
- ATGGCAAAGCACAGTGCTTGTAATCAGAGGAGGAGGAATCTTCAAATATTACTCAACAATACGACGTTGATACCTTTTAAATGGCGCGGCAAATACATGTGCTTCTATTGCGGTGACGATTTTGACAGTCACGTAACTTTAGCGAAACATACGAAAAGTCACGGACCTTGCAGTCTCAAAGATagagctataaaattagttaaatCAGCAGATGTAGAACTCAAAGTAGACGTTTCTGTTATTTCTTGCGAGATTTGTACAGAATCGTTTGATGAAATAGACGATGTTATCGGACATTTGATCTCGGAACACCAATTGCCTTATGATAGGAACGTGGAAATTTTGATATCCGCGTACCGGTTGAATGATCTTCAGTGTCGCGTTTGCGGTCAATTCTTCGACTATTTACGTAAATTGATAAGCCACATGAATACGGATCATCCGATCAACTGCTTTCCTTGTCCCAAATGTAGATTAAAGTTCAATAAGAAGAGAGACTTGGACTCTCACATAAGGTTTCATCACAGAGAATTGCACCCTTGCACTAAGTGCAAGCTGGAGTTCACTTCGAATGCCGCTCTGCAGAAACATAGATCTCATGCTCACTCTTCCACTTGTAACTTGTGCTTCCGAATATTTTCGTCAGACAGCAAAAGACTAGCTCACCTCAAGTCTGACCACGATTCTGATCAGAACCAATGTGGGTTCTGCTATGAGGTTCTGACAACGAAACAGGCTTTTATAAGACACGCTTTAAAATGTCAACATAATCCTCAAGAAGGaactattgtaataaatgaCAAGGATAAGAAAATTACTGTCAAGGAAATAAGGACGAGTTTGGCTTGCATTTTCAATATGACTACTGCATTGCCTTTTAAATGTTTCATGAATAAATTCATGTGTTTTTACTGCCCCGATACCTTCACGTCTTGCGACGAACTGAAGGAGCATACTGTAATACAACACCCTCACTGCGATATATCCTTTAagtgtatgaaattaaaaaatagatacgacggtattaaaataaaggtgGACATATCTTCCTTATCCTGTAAGCTGTGTCTCGGGTACTTTGATAATATGAGTCAAATTATCAACCATATAAACACGGAACATAAAGCGAAATGCGACATTTCAGTTGAGACTAACATACAAGCCTACAAGCTTGTACAAGACAACTATCCCTGCCCCATGTGTGGGGAGGTACATAGATATTTCTGCGTCTTACTCAAGCATATCAGCTCGATGCACAATGATAACAACCACATATGCATGTACTGCGGTGAAGCGTTTCGCACCGACCCTAATCTTAGAGCTCACTTGTCTAGGAGTCACCGAATCTCAGGCACTGTCACTTGTAATATCTGCAATCTCGTTTTTGCCAATAAAGGCATGTTGAAAACTCATCAAGGAAGCGTTCACGGAACGAAATTCTTTCAATGCGGAGAATGTACTGAGAAATTCCCTTCGCAGTACTCAATGAAACGGCATATGATCATTTCTCACGGCACCGGTCATAGGTGCACTTATTGCGATAAGTTGTTCacgaaaaattcttttatggTCAACCATGTGAGGAGGTTGCACTTGAAAGAGAAGAATGCTGAGTGCTCGATTTGCTTCGAAAGATTCTTTGATGTGCAAAGGCTGAAAATGCATATGGTTAAGCATGTTGGCGAAAGGAATTTTCATTGTGATATTTGCGGGAAAAAGTTTTTGTGGAAAAAGAATTTGAGGGGTCATATGGCTTCTCACATTCGGAATGCGAACGCCAGAAATTTGacctaa
- Protein Sequence
- MAKHSACNQRRRNLQILLNNTTLIPFKWRGKYMCFYCGDDFDSHVTLAKHTKSHGPCSLKDRAIKLVKSADVELKVDVSVISCEICTESFDEIDDVIGHLISEHQLPYDRNVEILISAYRLNDLQCRVCGQFFDYLRKLISHMNTDHPINCFPCPKCRLKFNKKRDLDSHIRFHHRELHPCTKCKLEFTSNAALQKHRSHAHSSTCNLCFRIFSSDSKRLAHLKSDHDSDQNQCGFCYEVLTTKQAFIRHALKCQHNPQEGTIVINDKDKKITVKEIRTSLACIFNMTTALPFKCFMNKFMCFYCPDTFTSCDELKEHTVIQHPHCDISFKCMKLKNRYDGIKIKVDISSLSCKLCLGYFDNMSQIINHINTEHKAKCDISVETNIQAYKLVQDNYPCPMCGEVHRYFCVLLKHISSMHNDNNHICMYCGEAFRTDPNLRAHLSRSHRISGTVTCNICNLVFANKGMLKTHQGSVHGTKFFQCGECTEKFPSQYSMKRHMIISHGTGHRCTYCDKLFTKNSFMVNHVRRLHLKEKNAECSICFERFFDVQRLKMHMVKHVGERNFHCDICGKKFLWKKNLRGHMASHIRNANARNLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -