Basic Information

Insect: Heliothis peltigera
Gene Symbol: Ctcfl
Assembly: GCA_958496145.1
Location: OY292321.1:1324952-1337425[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0024 0.16 12.9 4.6 1 23 172 194 172 194 0.98

2 11 7.6e-05 0.005 17.6 1.1 1 23 200 222 200 222 0.98

3 11 7.4e-05 0.0048 17.6 1.7 1 23 228 251 228 251 0.96

4 11 0.035 2.3 9.2 3.2 1 21 257 277 257 279 0.95

5 11 0.00011 0.0072 17.1 2.7 1 23 285 307 285 307 0.99

6 11 1.5e-05 0.00098 19.8 5.3 1 23 313 335 313 335 0.98

7 11 0.0034 0.22 12.4 0.9 1 23 343 366 343 366 0.97

8 11 0.018 1.2 10.1 4.3 2 23 373 394 372 394 0.96

9 11 0.00014 0.0093 16.7 2.4 1 23 400 422 400 422 0.98

10 11 2e-05 0.0013 19.4 1.7 1 23 428 451 428 451 0.93

11 11 1.1e-05 0.00075 20.2 4.4 1 23 465 487 465 487 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0024	0.16	12.9	4.6	1	23	172	194	172	194	0.98
2	11	7.6e-05	0.005	17.6	1.1	1	23	200	222	200	222	0.98
3	11	7.4e-05	0.0048	17.6	1.7	1	23	228	251	228	251	0.96
4	11	0.035	2.3	9.2	3.2	1	21	257	277	257	279	0.95
5	11	0.00011	0.0072	17.1	2.7	1	23	285	307	285	307	0.99
6	11	1.5e-05	0.00098	19.8	5.3	1	23	313	335	313	335	0.98
7	11	0.0034	0.22	12.4	0.9	1	23	343	366	343	366	0.97
8	11	0.018	1.2	10.1	4.3	2	23	373	394	372	394	0.96
9	11	0.00014	0.0093	16.7	2.4	1	23	400	422	400	422	0.98
10	11	2e-05	0.0013	19.4	1.7	1	23	428	451	428	451	0.93
11	11	1.1e-05	0.00075	20.2	4.4	1	23	465	487	465	487	0.97

Sequence Information

Coding Sequence: ATGGCGCCCCCCGATAAAAAGGACAAGACAAAACAAGCCCTGATTCCGTACACAACTGCTGTTATAACAGTAGCGGGAACAGAGGACGACGGTGACACCTCAGGGGTTGCATACTTCGTGGACGAAGATGGCAGGTACTACTACCAGCCCACGGTCGAGGGACAGGAGTTCGTCATGAACAACCAGACTACAAGTCAGGATTCTGAGccGGGTACCCAAGAATCAGACACAATGTTGACTGACCAAGAGGCCGAGGGTTACCAAACTGTGACACTGGTCCCTTCAGAGACGAATGGAGAAGTCAGCTATGTGTTGGTCGTCCAAGAGGAGAATAAAGCCATGGTCAATATTGATCTCAAGGTGGATCAGAGCGAGGCTGGTGAGAAAGGCAATGAGGATGTATACAACTTTGATGAAGAAGAAGCCGGGGAAGAGGCCTCTGAGGAAGACGATGATGGTCCTGATGGCCGGCCTAAGACTGCCCAGAAGAGGACCAAGCATGCTAGACCAGACTTCAACTGCAACTTCTGTCCCTATACTAGTCATCGCCGCTACCTCCTCCTCCGCCATATGAAGTCCCATTCAGAAGAACGTCCGCACAAGTGCAGCGTTTGCGAGCGCGGCTTCAAGACGATCGCGTCCCTTCAGAACCACGTCAACATGCACAATGGAGTCAAACCGCACGTCTGCAAGTACTGCAACAGCCCTTTCACTACTTCAGGCGAGCTGGTGCGGCACGTTCGCTACAAGCATACTCACGAGAAGCCGCACAAGTGTTCCGAGTGCGACTACGCGTCCGTCGAGCTGTCCAAGCTTCGTCGCCACGTGCGCTGTCATACTGGCGAACGCCCTTACCAGTGCCCACACTGCACCTACGCGTCCCCGGACACGTTCAAGCTGAAGCGCCATCTCCGCACTCACACCGGCGAGAAGCCGTACAAGTGTGAACATTGCAACATGTGCTTTACTCAGTCAAACTCGCTGAAGGCACATCGGCTCATTCATAATGTATCGGAGAAGCCGGTGTACTCTTGCGAGCTTTGCCCAGCCAAGTGCGGCCGTAAGACGGACTTGAGGATCCACGTGCAGAAGCTGCACACGTCGGACAAGCCGCTCAAGTGCCGCCGCTGTGGCAAGTCGTTCCCAGACCGGTATTCCTGCAAAGTGCATAATaagACCCACGAGGGCGAGAAGTGCTTCAAGTGCGACCTGTGCCCGTACGCGTCGACCACGCTGCGCCACCTCAAGTCCCACATGCTCAAGCATACTGATGAGAAGCCCTTCTTGTGTGACTTGTGCGATCAGTCCTTCAGGCAGAAGCAGCTTCTCCGCCGTCACCAGAACCTCTATCACAATCCTAACTACGTGCCCAAACCGCCTAAAGAGAAGACGCACACGTGCCACGAGTGCAAGCGCATGTTCGCTCACAAGGGCAACCTGATCCGCCATCTCGCTGTCCACGACCCTGAGTCTGGCCATCATGAGCGAGCTCTCGCCCTCAAGATCGGCAGGCAGAGGAAGGTCAAGTACATTGATGGAGAGCCTATGAGGGATATCCGCGTGCTGGACAGTTCTGACGCCGCAGATATGATGAAGCTTGGCCTGGCGAACAACGAGCTCAAGCGAGGTGAGCTGGTGACCGTAGCCGATGGTGATGGCCAACAATACGTGGTGCTGGAAGTCATACAGCTGGAGGATGGAACTGAACAGCAAGTGGCCGTTGTCGCACCTGATTATATGGAGGAGGAGGAACAAGAAGAGGAAGAAGAGGAGGAGGAGGAAGAggaggaagaagaagaaggagGAGAAAGGGACTACGTAATTAAAAACTCTGTCACTGACCGCAGCATCAAGCTGGAGAAGGAGGTTGATAGCTGCTTTGGATTTGATGAGGAGGAGGAAGAGCCGGACGACGATGATTATACTGAAAAAGTAGTGTTGCGTTTAGTTTAG
Protein Sequence: MAPPDKKDKTKQALIPYTTAVITVAGTEDDGDTSGVAYFVDEDGRYYYQPTVEGQEFVMNNQTTSQDSEPGTQESDTMLTDQEAEGYQTVTLVPSETNGEVSYVLVVQEENKAMVNIDLKVDQSEAGEKGNEDVYNFDEEEAGEEASEEDDDGPDGRPKTAQKRTKHARPDFNCNFCPYTSHRRYLLLRHMKSHSEERPHKCSVCERGFKTIASLQNHVNMHNGVKPHVCKYCNSPFTTSGELVRHVRYKHTHEKPHKCSECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCEHCNMCFTQSNSLKAHRLIHNVSEKPVYSCELCPAKCGRKTDLRIHVQKLHTSDKPLKCRRCGKSFPDRYSCKVHNKTHEGEKCFKCDLCPYASTTLRHLKSHMLKHTDEKPFLCDLCDQSFRQKQLLRRHQNLYHNPNYVPKPPKEKTHTCHECKRMFAHKGNLIRHLAVHDPESGHHERALALKIGRQRKVKYIDGEPMRDIRVLDSSDAADMMKLGLANNELKRGELVTVADGDGQQYVVLEVIQLEDGTEQQVAVVAPDYMEEEEQEEEEEEEEEEEEEEEGGERDYVIKNSVTDRSIKLEKEVDSCFGFDEEEEEPDDDDYTEKVVLRLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00786220;
90% Identity: iTF_00783778; iTF_01285805;
80% Identity: -