Basic Information

Insect: Heliothis peltigera
Gene Symbol: -
Assembly: GCA_958496145.1
Location: OY292336.1:1495067-1502236[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00039 0.025 15.4 1.1 1 23 275 297 275 297 0.98

2 12 0.077 5 8.1 1.1 3 23 306 326 304 326 0.90

3 12 0.79 52 4.9 0.3 1 23 330 352 330 352 0.94

4 12 0.00019 0.012 16.4 0.7 1 23 357 380 357 380 0.98

5 12 0.00098 0.064 14.1 0.4 1 23 384 407 384 407 0.93

6 12 0.016 1.1 10.3 0.1 3 20 424 441 423 447 0.92

7 12 0.00077 0.051 14.4 0.9 3 23 457 478 457 478 0.98

8 12 0.0093 0.6 11.0 0.4 2 23 498 520 497 520 0.97

9 12 9.4e-06 0.00061 20.4 0.5 1 23 531 553 531 553 0.98

10 12 8.2e-07 5.3e-05 23.8 2.0 1 23 559 581 559 581 0.99

11 12 3.8e-06 0.00025 21.7 1.0 1 23 587 609 587 609 0.98

12 12 1.5e-05 0.00098 19.8 0.3 1 23 615 638 615 638 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00039	0.025	15.4	1.1	1	23	275	297	275	297	0.98
2	12	0.077	5	8.1	1.1	3	23	306	326	304	326	0.90
3	12	0.79	52	4.9	0.3	1	23	330	352	330	352	0.94
4	12	0.00019	0.012	16.4	0.7	1	23	357	380	357	380	0.98
5	12	0.00098	0.064	14.1	0.4	1	23	384	407	384	407	0.93
6	12	0.016	1.1	10.3	0.1	3	20	424	441	423	447	0.92
7	12	0.00077	0.051	14.4	0.9	3	23	457	478	457	478	0.98
8	12	0.0093	0.6	11.0	0.4	2	23	498	520	497	520	0.97
9	12	9.4e-06	0.00061	20.4	0.5	1	23	531	553	531	553	0.98
10	12	8.2e-07	5.3e-05	23.8	2.0	1	23	559	581	559	581	0.99
11	12	3.8e-06	0.00025	21.7	1.0	1	23	587	609	587	609	0.98
12	12	1.5e-05	0.00098	19.8	0.3	1	23	615	638	615	638	0.98

Sequence Information

Coding Sequence: ATGGAAACTGATAAAGTATGCcgtatttgtttaattactgATGTAAAACTACACGACTTGAGAGCATATCCTTTAGAATCTTATTATGAGTCTGTTATTGGAACCAATCAGCTATTCCCTAATTTACCACCATATGCTTGCTTCGAGTGTGCAGCACTGGTGAGGAAGTTCTATTTCTTcagacaaaaatgtttgaggAGCCAGGCAGCGCTCTATGCGGTGGTGGACCAATCTGGCAAGGTAAATGAAGCACAACTCAAAGAGATCGACCGAAATAGTCTCCATATCACTTCAAACTGCAAAACCACCACTACCACAGTAATGAACATAACCTTTGCCGatgaacaaataataaaacttgaacCTATTACTGCAGATATTGATTTAGACgctgataatgataaaattaaattagaagaTCATAATTATGCTTTGAATGATGGGTCAGATCAAATGCTGTcgagtgatgatgatgaaccacTTTCAATTCAtaaggaaaagaaaattttaactaTGGAAAATATTGAGTCGAATGAAGAGAAGATTGatttcaaaaatgattttggAGAACTGGCATTTGCTGTAGGAGCTGACGATGGAGACTCGGGACTTACTATTGAAGTACCGCAAGTGGTCGGAAGAAAGAAGAAACATAGAATTAAGACAGTCACATATAAGCAATCAAAGAAGTTAATTAACCCTATTCTAGAGGCTGGTGGCAGCGATTATGACCAATATACAACTGTAATAACATTATCATTAGAAGAACAGATAGCAGAAATAATGAAGCGCAAAgaatcatcaaattatttgaattctCCATACCAGTGTAACCTTTGTTTTAAAGGGTTCATAGATAATGATGCGTGGAACCATCATGTTAGCAAACATTCTGTGAGCGCAGGCAGCATAGAATGTATAGTGTGTAAGTTCcggtttaaaacaaaacgtgCATATCAAAAACATGCGTCTAACCACGAAAAGAAATATGCATGTAAATCATGTCCATACATTTCCACCAATACgACCCAAGCCAAGCAGCATCAAGGATGGCATAAAGGAGTCACATTCAAGTGCAAATATTGCCCTGAGATCTTTacGATCTGGACGTCGTATATGAGCCACGTACGTATCAAGCATCCGTCGCAGCATATCTGCAACGTGTGCGGGTACTCCTTCATCAGCAGCATGGGCCTCGCCATGCACAAGACTATGATGCACAAGGATGTGCAGGAGAACGCAGAAGAGAACACAGAAGATGGTCCGTACTGCGCGGAGTGCGACGTGAAGTTCATATCTACAGAAGCGTACAAGCGACACATGGTGATGTCCGTCAAGCACACGCAGAGCACGGAACCTATTAAAGGGTGTCGAACCTGCGGCGCGACATTCGAGAGCGCTGAGGAGTTACGTATTCACCATCGGAAAGAACATTCTCGCAAGAGACCCAAGAATTATGGGAAGAAACACCCCACCACCGCCTTCCCCATGCAGTGTGAACATTGTCCAGAAGAGGTGTCGAGCGCTCGCGACTACTGGACACATTTCCGTCGCGCACACCCAGATAAGAAGTATCCAATTCAAAAGAACTATATCTGCGATATTTGTGGCAAGAGTTTTAGGGGCAACGCGTTCCTGGTGTACCACAAGCGCACCCACTTCAGCGAGCGCGCGTACAAGTGTTCGCAGTGCGACAAGGCCTTCTTCAACCGAACTAACCTGCAAGTGCACGAGCGGACGCACTCCGACACGCGGCCGTACCCCTGCTCTGTGTGCTTCAAGGCTTTCAAGAGCAAAGGAGCGCTTAACAGACATTTTAGGaGCCACACAGGCCAAAAACCTTACGAATGCGAGGTCTGCGGCCGAGGGTTTTCCCAGTCGAACAGCAGGAAGGTGCACGTCCGTACCGTGCATCTCAAGCAGCCCGCGCCCTACGTCAGCCGCACGCGCCTCGAGCGACGCAAGCAACCGCCCAAGGAAGCGCAGCCGcaacagtttatttattga
Protein Sequence: METDKVCRICLITDVKLHDLRAYPLESYYESVIGTNQLFPNLPPYACFECAALVRKFYFFRQKCLRSQAALYAVVDQSGKVNEAQLKEIDRNSLHITSNCKTTTTTVMNITFADEQIIKLEPITADIDLDADNDKIKLEDHNYALNDGSDQMLSSDDDEPLSIHKEKKILTMENIESNEEKIDFKNDFGELAFAVGADDGDSGLTIEVPQVVGRKKKHRIKTVTYKQSKKLINPILEAGGSDYDQYTTVITLSLEEQIAEIMKRKESSNYLNSPYQCNLCFKGFIDNDAWNHHVSKHSVSAGSIECIVCKFRFKTKRAYQKHASNHEKKYACKSCPYISTNTTQAKQHQGWHKGVTFKCKYCPEIFTIWTSYMSHVRIKHPSQHICNVCGYSFISSMGLAMHKTMMHKDVQENAEENTEDGPYCAECDVKFISTEAYKRHMVMSVKHTQSTEPIKGCRTCGATFESAEELRIHHRKEHSRKRPKNYGKKHPTTAFPMQCEHCPEEVSSARDYWTHFRRAHPDKKYPIQKNYICDICGKSFRGNAFLVYHKRTHFSERAYKCSQCDKAFFNRTNLQVHERTHSDTRPYPCSVCFKAFKSKGALNRHFRSHTGQKPYECEVCGRGFSQSNSRKVHVRTVHLKQPAPYVSRTRLERRKQPPKEAQPQQFIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01285776;
90% Identity: -
80% Identity: -