Basic Information

Insect: Heliothis peltigera
Gene Symbol: -
Assembly: GCA_958496145.1
Location: OY292337.1:4181178-4195504[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.11 7.4 7.6 0.2 2 20 7 26 6 28 0.92

2 13 0.83 54 4.9 0.4 1 12 203 214 203 223 0.90

3 13 0.86 56 4.8 0.0 1 19 359 377 359 377 0.97

4 13 8.2e-05 0.0053 17.5 0.4 1 23 384 406 384 406 0.98

5 13 3e-06 0.0002 22.0 0.8 1 23 420 442 420 442 0.99

6 13 0.03 2 9.4 0.8 1 23 467 488 467 488 0.78

7 13 6.7e-05 0.0043 17.8 0.3 3 23 496 516 494 516 0.96

8 13 0.022 1.4 9.9 1.9 1 23 532 554 532 554 0.95

9 13 1.4e-06 9.5e-05 23.0 4.5 1 23 560 582 560 582 0.98

10 13 0.00053 0.035 14.9 5.2 1 23 588 610 588 610 0.97

11 13 2e-06 0.00013 22.6 0.4 1 23 616 638 616 638 0.98

12 13 0.00019 0.013 16.3 1.2 1 23 642 664 642 664 0.98

13 13 0.00013 0.0084 16.9 0.1 1 23 672 695 672 695 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.11	7.4	7.6	0.2	2	20	7	26	6	28	0.92
2	13	0.83	54	4.9	0.4	1	12	203	214	203	223	0.90
3	13	0.86	56	4.8	0.0	1	19	359	377	359	377	0.97
4	13	8.2e-05	0.0053	17.5	0.4	1	23	384	406	384	406	0.98
5	13	3e-06	0.0002	22.0	0.8	1	23	420	442	420	442	0.99
6	13	0.03	2	9.4	0.8	1	23	467	488	467	488	0.78
7	13	6.7e-05	0.0043	17.8	0.3	3	23	496	516	494	516	0.96
8	13	0.022	1.4	9.9	1.9	1	23	532	554	532	554	0.95
9	13	1.4e-06	9.5e-05	23.0	4.5	1	23	560	582	560	582	0.98
10	13	0.00053	0.035	14.9	5.2	1	23	588	610	588	610	0.97
11	13	2e-06	0.00013	22.6	0.4	1	23	616	638	616	638	0.98
12	13	0.00019	0.013	16.3	1.2	1	23	642	664	642	664	0.98
13	13	0.00013	0.0084	16.9	0.1	1	23	672	695	672	695	0.96

Sequence Information

Coding Sequence: ATGTGTGGTCAACCGCTTAGTTGTCCTGTTTGCTGGAATAAGAGTTTTAGTTCTAAACAAACTCTACTCTACCATTTGACGAATgctttagaaaatacatactgTCCCGTTTGTATATGCAAATGTACCTCATTAGCTCATCTTGTAGAGCATCTGTCGCAGGACAAATGCCAACGAGATAATACTGTACACAAATTTGAGCAGAAAGAGAATGAAAATACTAGTATTCAAAATACAGTCATAGAAAATTCTGAAATAAGAGTTCTTCAGAATGacATTAACGCtgataataaaagtaattttgaaacTCAAAATGATGAAGAGACTCCAGCAGAAAGGAGTGAGACCAACAAAATGTATGTGGATCTGTTTGATAAACAGATGAAACCATGTCTTCAAACAGGTGAACTGAGGCTTGTGAAGGAAAATGGAGAAAGTCGGTACATGATTGTCACACCGGATCCAGGCCTGAGTGCTGAAACCACAATAGTgacgaaacaaaataatgatggCACTATATCTCTGACCACCATTAAagATATGAAAATAGAATCAGAGTCATCAATAGCAACAGACGCCATACCGGATGATAATCATGAAGAGATCTACAGTTGTAACACTTGCAAAGTGTCCTTCACATCTGTTATAGACCACATACAGAACTACCATAATGATCAGGATGTTGTTGTAGAGgAACCATTAGAAGATAATCAAACTGACTCAATTCCCATTGAATATGAGCCCACAGATCATGAAGAGTCAATGGTGACTAGTGACAAGCAGGCACCTCGGCGAGTTATCACTGACACCGGTGATATTGTAGAGGAACCActtgaattcaaaaatgattcTCAATTCATAACACCAGATCCTGTGTCATCAGaTCAAATGGAGCCAATCAAAGCGGAGAAAAAAGGGAAGCGTTACATCACAAAACGCGTCATGCAAGTGGACAAAATATGCGACAGTGTCATCCAAGATGCCATGAAAACTGACGCCAAAGataaaagCGGTCCGTATCACAAAGTAATCGTTAAAGAGGTACCAACGGAGAGTGGGTTTGCAATCAAAATGTACCAATGCTTAGCCTGTGACATTTCTGTCACGAACTTAGAAGAGTTCAAAATTCATCCCTGTAAAGTATtgAAATATCCGTGCCTATATTGTCCCGTGGCGTATGAAAATTCGAAATCACTGTGTGCACATATGAAGgtacacaaaattaaatcagGTAATGTCGCCACTGACCCTGTCTCATACGAATGTGATATATGCAATACCGTGTTTCCGACCAACAAGTCTTTGAAACTACACAAACGGATGCACGATCCTGTTAAGTCTCGCCCCATAGAGTTCCCAGTGGAGAACACAGACGGTTCCCAAGTGAGCGACCGCCAATACATGTGTCCGATATGCGACAAAGTGTTCCCTATAGACTACAAACATATCCACCAGAATTCACACAAGTCTTCCGCTAAAATAAACTGTGGCATTTGTAACAAGAAGTTTACTTCTAGAGAGTATCTCGAAATGCACGCTAATGTCCATAATATTGATAAGGTACCAGTGAACAAACAGGATAAGAACTTACCATACAACTGTATATATTGTAACCGAAGGTTTGCGAGGCCACATGAGAAAGTTAAACACGAGAGGATACATACAGGAGAAAAGCCGCACTCTTGCGAGATCTGTGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCTAGACCATACGCCTGTCCGCACTGCGGGAAGAGGTTCAAAGCGCACAGCGTGTACAACCATCACCTGCTCACACATTCTGAGGTGCGCGCCTATAAGTGTCCGTACTGTCCGAAAGCGTTCAAGACGTCCGTACAACTTGCCGGACACAAGAACTCACATACCAAACCGTTTCAGTGCCAGCATTGTAATAGGCCATTTGCGTCCCTATATGCGGTGCGAGTGCACACAGAGACGCATGCGCGTCAAAACAACCTGAAGTTCTCGTGTGAAATGTGCGGCGCCAGCTACGCGCGAGCCTTCGCCCTTAAAGATCACATCAAGCAAGCGCATAAGCAGGAGCCGCCGCAGTCGCCCACGCAGACCatgCCTACGGAGGAAGAGTGGAACACAGATACAGACCCCCTAAACAAAGATTTGTCGAATGAAATCGACCTGGGCATAAATTCCAACGAGTTGATAGTTCCTTAA
Protein Sequence: MCGQPLSCPVCWNKSFSSKQTLLYHLTNALENTYCPVCICKCTSLAHLVEHLSQDKCQRDNTVHKFEQKENENTSIQNTVIENSEIRVLQNDINADNKSNFETQNDEETPAERSETNKMYVDLFDKQMKPCLQTGELRLVKENGESRYMIVTPDPGLSAETTIVTKQNNDGTISLTTIKDMKIESESSIATDAIPDDNHEEIYSCNTCKVSFTSVIDHIQNYHNDQDVVVEEPLEDNQTDSIPIEYEPTDHEESMVTSDKQAPRRVITDTGDIVEEPLEFKNDSQFITPDPVSSDQMEPIKAEKKGKRYITKRVMQVDKICDSVIQDAMKTDAKDKSGPYHKVIVKEVPTESGFAIKMYQCLACDISVTNLEEFKIHPCKVLKYPCLYCPVAYENSKSLCAHMKVHKIKSGNVATDPVSYECDICNTVFPTNKSLKLHKRMHDPVKSRPIEFPVENTDGSQVSDRQYMCPICDKVFPIDYKHIHQNSHKSSAKINCGICNKKFTSREYLEMHANVHNIDKVPVNKQDKNLPYNCIYCNRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLLTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFQCQHCNRPFASLYAVRVHTETHARQNNLKFSCEMCGASYARAFALKDHIKQAHKQEPPQSPTQTMPTEEEWNTDTDPLNKDLSNEIDLGINSNELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00786204;
90% Identity: iTF_00786204;
80% Identity: -