Basic Information

Gene Symbol
-
Assembly
GCA_958496145.1
Location
OY292343.1:154790-156244[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0039 8.2 7.3 0.1 46 86 70 110 56 111 0.80
2 4 0.0018 3.9 8.3 0.1 49 83 169 201 131 204 0.80
3 4 0.025 52 4.7 0.1 50 83 260 292 247 294 0.80
4 4 0.13 2.8e+02 2.3 0.0 51 83 361 392 338 394 0.83

Sequence Information

Coding Sequence
ATGATGTCGTCAGTTGCAGGTCAGGAGGCGAGATATTTAATTGACGCGAGCGACAACAGACAATACATACAAGTTAATGAAGCCCCTGTAGTTGTACAGGAAAGTATATCAGAGACTGgtgaaaaagaaattaaaccCAAGGATGATGACAACTTCTGGgacagaaacaaaataaaattactactaACATTGTGCTTACAGAAcagatacaaaaatgtaacCAAAGACAAAACATTTTGGGATGAAATAGCTGTCCACGTGGGCTCAAGTTCAGATGattgtgttaaaaaatatagaaatttaAGGAGAACTTACATTAGACTCTTGAAAAAAAAGAGATTAGGCAAAGAAATCAAATGGGTCCACTATAATACTTGCGAAGAGGTTTTCAAGGAATGTAAATCACTTCCACCCTCTGTGTTAGAGCCATGGGAAGAGCACAAAGTGAGAAGATTGTTGAGCCTCTATATTGAGAACCTGAATAAATTTCGAAATCCTGATTGTCTGCAGAAGGATTTATGGCGAGAGATAGCATCTCAGTTAGGTACAACAGAGTACAACTGCTATCATAAGTTTAAGAATCTAAAAAGAGCCTACTTCAATTGGAAAGAGAGAAGTAGAGAATCTGGAAAACCAATTAAATGGcaatatcatcattattttgagagaatattttataattataatccgAATATTGGACCATGGGACAAGAATAAAACACGCTTGTTAATAGAAGAGTACAAGCAAATAGCTGATAAGTTCAAGAATCCAAGATATCAGAAAAAAGAGTTATGGAAAGAGATAGCGACGTCAGTAGGAGAGCGTCCGATGGACTGCGACAAAAAATTTCGAAACTTAAAGCAGACGTATATTAGGTTAAAAATGAGAGCTGATACAGGGAGATGTATAACAAAGTGGCGTTATTATAAAGATTTCGAAGCTATTTACAATGGGTCGACTTGTTACGTAAGCAGTCATGGACAACTCAGGTCGAACAAGTCACCAGAGGACGATTACGTCAAGCAGCTATTAACATTCTATGTAGACAACAAGGATAGATTTAGAGACCCTCTcaccaaaaagaaaaatgtgtgGAGAATTCTTGCTCCAAGAATAGGCATGACTTCGGAAGAATGCGATCGTAAATTCCGTAACTTGAAACAAACCTACATCAGATTAGCTGACAAAAAGAAAGAAACTGGAAAGATAAATAACTGGccatattattcatattttgaaaagatttttgatGATAACACAAGGGGAAGCCATACATGTAACCATGGTTTTAATGTAGATAACGCGAGTATAGCTGAACTTAAGAGGATAATGCAAGAAGTTCAGGACAGAAACGATAATGACAGGTTTGAAAGTTTGGTCAGAGCTGTGGAAGAGTCAAACAACATACAAAGAGAACGAAATAGAATATTACAGGCTTTGCTAGATAAAAAATGA
Protein Sequence
MMSSVAGQEARYLIDASDNRQYIQVNEAPVVVQESISETGEKEIKPKDDDNFWDRNKIKLLLTLCLQNRYKNVTKDKTFWDEIAVHVGSSSDDCVKKYRNLRRTYIRLLKKKRLGKEIKWVHYNTCEEVFKECKSLPPSVLEPWEEHKVRRLLSLYIENLNKFRNPDCLQKDLWREIASQLGTTEYNCYHKFKNLKRAYFNWKERSRESGKPIKWQYHHYFERIFYNYNPNIGPWDKNKTRLLIEEYKQIADKFKNPRYQKKELWKEIATSVGERPMDCDKKFRNLKQTYIRLKMRADTGRCITKWRYYKDFEAIYNGSTCYVSSHGQLRSNKSPEDDYVKQLLTFYVDNKDRFRDPLTKKKNVWRILAPRIGMTSEECDRKFRNLKQTYIRLADKKKETGKINNWPYYSYFEKIFDDNTRGSHTCNHGFNVDNASIAELKRIMQEVQDRNDNDRFESLVRAVEESNNIQRERNRILQALLDKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00973738;
90% Identity
-
80% Identity
-