Basic Information

Insect: Helicoverpa zea
Gene Symbol: -
Assembly: GCA_002150865.1
Location: KZ118666.1:69654-87411[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.021 1.5 9.5 0.2 1 23 217 239 217 239 0.97

2 27 0.013 0.9 10.2 6.7 1 23 245 268 245 268 0.93

3 27 1.4 96 3.8 1.6 1 23 281 303 281 303 0.91

4 27 6.5e-05 0.0046 17.4 2.8 1 23 547 569 547 569 0.98

5 27 1.4 99 3.8 0.6 3 23 576 597 574 597 0.90

6 27 0.0032 0.23 12.1 0.6 2 23 606 627 605 627 0.96

7 27 0.00071 0.05 14.2 0.8 3 23 632 652 631 652 0.98

8 27 0.18 13 6.6 1.7 2 23 666 688 665 688 0.96

9 27 0.0021 0.15 12.7 0.9 1 21 694 714 694 715 0.94

10 27 2.5 1.8e+02 3.0 0.7 1 21 827 847 827 848 0.92

11 27 3.8e-05 0.0027 18.1 1.9 2 23 855 876 854 876 0.97

12 27 1.3 91 3.9 1.7 2 23 880 901 879 901 0.95

13 27 0.0083 0.58 10.8 4.6 1 23 906 929 906 929 0.96

14 27 0.37 26 5.6 0.9 2 23 988 1010 988 1010 0.92

15 27 0.0045 0.31 11.6 3.2 1 23 1016 1039 1016 1039 0.97

16 27 0.82 58 4.5 0.4 1 20 1043 1062 1043 1063 0.94

17 27 5.7e-05 0.004 17.6 1.2 1 21 1072 1092 1072 1095 0.95

18 27 1.4 99 3.8 1.0 1 23 1100 1123 1100 1123 0.85

19 27 2.3e-05 0.0016 18.8 0.2 2 23 1136 1157 1135 1157 0.97

20 27 0.00091 0.064 13.8 1.4 1 23 1163 1185 1163 1185 0.98

21 27 0.19 13 6.5 1.9 2 23 1191 1211 1191 1211 0.96

22 27 4.7e-05 0.0033 17.9 0.3 2 23 1217 1238 1217 1238 0.97

23 27 0.012 0.88 10.2 0.2 2 23 1243 1263 1242 1263 0.97

24 27 4.2e-05 0.0029 18.0 3.1 1 23 1310 1332 1310 1332 0.98

25 27 0.0018 0.12 12.9 1.2 3 23 1339 1359 1337 1359 0.96

26 27 0.076 5.3 7.8 0.8 1 23 1365 1388 1365 1388 0.93

27 27 0.067 4.7 7.9 1.5 2 23 1394 1416 1394 1416 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.021	1.5	9.5	0.2	1	23	217	239	217	239	0.97
2	27	0.013	0.9	10.2	6.7	1	23	245	268	245	268	0.93
3	27	1.4	96	3.8	1.6	1	23	281	303	281	303	0.91
4	27	6.5e-05	0.0046	17.4	2.8	1	23	547	569	547	569	0.98
5	27	1.4	99	3.8	0.6	3	23	576	597	574	597	0.90
6	27	0.0032	0.23	12.1	0.6	2	23	606	627	605	627	0.96
7	27	0.00071	0.05	14.2	0.8	3	23	632	652	631	652	0.98
8	27	0.18	13	6.6	1.7	2	23	666	688	665	688	0.96
9	27	0.0021	0.15	12.7	0.9	1	21	694	714	694	715	0.94
10	27	2.5	1.8e+02	3.0	0.7	1	21	827	847	827	848	0.92
11	27	3.8e-05	0.0027	18.1	1.9	2	23	855	876	854	876	0.97
12	27	1.3	91	3.9	1.7	2	23	880	901	879	901	0.95
13	27	0.0083	0.58	10.8	4.6	1	23	906	929	906	929	0.96
14	27	0.37	26	5.6	0.9	2	23	988	1010	988	1010	0.92
15	27	0.0045	0.31	11.6	3.2	1	23	1016	1039	1016	1039	0.97
16	27	0.82	58	4.5	0.4	1	20	1043	1062	1043	1063	0.94
17	27	5.7e-05	0.004	17.6	1.2	1	21	1072	1092	1072	1095	0.95
18	27	1.4	99	3.8	1.0	1	23	1100	1123	1100	1123	0.85
19	27	2.3e-05	0.0016	18.8	0.2	2	23	1136	1157	1135	1157	0.97
20	27	0.00091	0.064	13.8	1.4	1	23	1163	1185	1163	1185	0.98
21	27	0.19	13	6.5	1.9	2	23	1191	1211	1191	1211	0.96
22	27	4.7e-05	0.0033	17.9	0.3	2	23	1217	1238	1217	1238	0.97
23	27	0.012	0.88	10.2	0.2	2	23	1243	1263	1242	1263	0.97
24	27	4.2e-05	0.0029	18.0	3.1	1	23	1310	1332	1310	1332	0.98
25	27	0.0018	0.12	12.9	1.2	3	23	1339	1359	1337	1359	0.96
26	27	0.076	5.3	7.8	0.8	1	23	1365	1388	1365	1388	0.93
27	27	0.067	4.7	7.9	1.5	2	23	1394	1416	1394	1416	0.95

Sequence Information

Coding Sequence: ATGGACGAGGATATTTTTCCCGAATTATGCCTGATGAATACGAAGAAAACGTATTCAAAGACACCTAAAAAGCAGGGAAACGCACCTCCTGTGTCTAATAATGTTAAAGAAGCTTCTAAACCATCAGGAAAGGTCTCGGAACTTGGTGAACCGTTGACTACAAAAGTGGCGGTTGAGTATTTGCTAAGTGGAAAACTAAAATCGGAAGTATGTCGTTATTGCTTGAGAATATCACCTGGTTTGTCCGAACTGGATCAGATCATGCAGATTGCGGGCACAGGAgccatttataaaataacaatcagAGAGATGATAGCTTGTTTCTATCCTTTCAAGGTGAGCGAGAACCAAGAATTCCCAGAGAGCATCTGTCAGAAGTGTGTCGACAAAGCGTTAAACGCATATCTCTTCACACAGCAGTGCGAACAAGCGGAACGCGCTCTAAACAACTGTTTCATAGACATGGACGAAAAACTAACAAAACTAGACCCCATAGATAGACCGAAAAAACGAGGCAGACAGAAACTAAAACCGAACTACAACGTTTTATATGCTgaacataaaaaagtaatggATTATGCCGAACCTATTAGACACCTCATCAACTTACAAACAGAATCATTGAGCAACGAACCCGTTTGGAACGAATTTGAATGCAAAAAGTGTTGGCAAGTACTCCCTAACTTAGAAACGTTGCTGAACCATGAAAAATTGCATCCGAAAACCATGTGGTACCACTGTCGGTTATGCGGTAAAGCTTTTATAAAACATAACCAATTGAAAAAGCATCACACACAAGTCCACGTTCGTGGTAAACAGATGTCAGAAGCTGATAAGacatttaaatgtaaagaaTGCGGTAACATAACAGAAAATTACGAACAACATTTGCAGCATATAGAAAAGCATAAGTTCAAAAGTGTCATGGAACATTTGATTGAGAAGAAAACGGACCAACTGTGCCTAATTTGTCTGAAGAAGTCAAGCAACTTAGTGGAGTTGGATAAAATGGTCTGCATTCATGGAAGTTGTCCTGAACTGGTGGGGGATAAAACACTGTATACGGTGCTAGCTTCTACGCTGCctgatATGCTCTACCTACACAACTTCATTGGGACAAAAATATGCGAACAGTGCCTTAACCATGCGATCACTTCATACGTATTCATTCACCAATTTATCTTCACTAGGGAACGTCTAGATTTATGCATCGGTCTTATGCTAGAAAACCTTAAGGATATCGAACCCCATACTAATGTTTTTGTACAAGTTTCACCCCCCGTTATCATGGCACCCCCAGAAATTGATGAAACGTTACTTCTAGATGAGAATGAACCTATAGATGAAACTAAACTAAAAGTAGACGTTCTAGAAGATGAATTTAGACTGAAATCGGACAGTGAGAGCGAAGAAGATAGACCCGTTGAAATGAAACCTGATGTAAAAACTGAATATAAAGTAGATTTAACTCCAATACCAGATATAGAGAATTTAGCTAGAACGGCAACTAAAACGTATAGAAATAAGAAATTAGTTAACGGCTTACAGAGTAATAGTAATAACAAATACCCGGTAGATGTTTGCAGCGAATTTTTGACATTCaacaaaaagaagaaagttaaaaaggttttagttAAATACACTTGTCCAATCTGTAGCAAACATTTCATATCCGACTATTTCCTAAAAAGACATATTTTGAAACATGTTAGTAAAAAAGTTCAGTGTATTATCTGTGCTAGTAAGTTTAAGTCTAAATTCTATTTGTATGAACATACAAAGATGGAACATTTGTTGAAACAGAGCTTTTATCTGTCATGTAGGATATGTGGGCGGACTTATACTGATGTTCTGAAGCTTCAGACTCATGAAAGACAACATTATTTGAAAGCTTGCCAACTGTGCAATAAGGTCTATGCAACTCAAGCTCATTACGACAACCACATACAAAGGCATTCaaccaaattaaaaatgttaaaagacAAACGAGCCCAAACGTGCAGTTTTTGCGAGAAAGAATGTTCAAACGACAATGAACTCTCGCtccatgtaaataaaatacatttacaaattaAGCCTTATAACTGCGACATGTGTGAAAGACAGTTCTATACTgagaataatttgaaaaatcatAAAAAGGGAGAAAACTTCTTAGCGCACACACAGATATGCAACAGCTGCACAGAAAAACTAATACAGGCAtatattttcatagaaaatgcTAAAGAAACATTCAAGATTATTGACAACTATGTAAATGATTTGTTCAAGAAATCAGATGAAATCTACCATCATTTGCCTGAGGCACAAATAGAAAGTAGTAATGTAGTTATAGTTTTAGACAATGTTCTTAATGATGTAATTACAGAAAAGGAGagaatagatattttaaaacaggACATCAATAAAGTTCCTGAAAACAAGAATGAATTCCAAGaagttaaaaaagaaacaccaaaaacaaaatattccaaattcaaatgtaCAAAATGTCTTGTAAAACTACCTTCATATAGAGCGTTGAAGCTACATAGATACACATGTATGAAACAGAAAATAGAATgcaaaatatgtttcaaaagATTTCGAAATCAGCAATACTTAAATTCACATTACAAAGTGCATGCCAGTTTGAGATGCAAGATTTGTCACGAAATTCTTCACGAGGAAGAATTACTCGAacaccttaaaataaaacatattgatTCTTTACATACATGTTCTCAATGTAATGAAGTATTTTATACACTAAACACTCTACAAACACATGAAAAAATTTGCCACAAAATCAAAGGAGAAAACCCGCACTGCTTGATGTGCCTTAAAACTTTTACCGAAGAAGAATTAAAGTTACATAATTGCAAATACAATTGTCCGGAATGTTCTGAAGTACCGTGCATGCATTATAAGTATCTGATGTTTTATCGAGAACAGATATTAAACCGTGCAGGCAAGGCGAAGTGTTTAGACTGTGATTATGTCTGTAGAAGAAAGGAAATCTTACTCGGACATGTAAATAGAGAACATTTGGACCATCATCCGTTCACATGTGATAAATGCGGACAACAGTTTTATTCCAAAATAGTTCTAACGTCTCATATACACAAGTTTCATGAAGACTTCTTTGTATGCAGATTCTGTGATTCAGAATTCAGCAATATTAACACATATACACAGCATGTGGAAGCCTGTGAGGATATAGAAAGGAGTTTCGTTTGCGATGAGTGTCCAGCCTCCTTTGATTCATCAGATAATCTAACTAAGCATATAAAATGTAGACATAGTACTGATGTTTTCCCATGTGGATTATGCAACAAAAAGTTTCTGAAAGATTCTAAGAGAAAGGAACATATGGTCAAGGTACATAGTGGCCTACAAAGTAAGAACAAAGTCATTAATGTGCAATGTGTTGTGTGTCAAGAGACCTTTGATACTAAAGGGGAATTAGTACAACACATGAGGTCTCACGGACCGAACACAACCTACCCTTGTAGAATATGCAATACTGAGTATGAAACCTTAAGACAGTTTAGAGCACATTACCGCAAACACAACGGACCATTTGCCACTTGCCACATCTGCGGTAAAGAGATGAGAGAAATTCTTCTGAAAAAACATCTAACTACCCACACAAATTCCATAGAGACCTGCGAAACTTGTGGCAGGTCATTTCCGAACATAGCTTTGCTAAAATCTCACCAAAAAGTTCATTTGGAAAATGTGCCATGTCCTAAATGTAATAAGATGATCAACCCAGCTAGATTGCGCAGGCATTGGAGAAGACATTTAATGGAGGAGAATCCTGGTAATACAGGAATTAAAAAACAGCAGCCAAACTTGAAATGTGAGCGATGTGACTACAAAACTTGGAACAACACACTGCTAGAATGCCATATGAACCGTCACCATTTAAAGATTAAGCCTTACGTTTGCCATATATGCAGCAAAGATTTCATaggaaaacatttattgaagaaaCATATAGAAACACATAACATGAAAAGCGTTATGTGCATGGTCTGTCTAAAGAGTTTTGCTAACTCTGCATGCCTGAAAATGCATTTACGTTTGCATACTGGTGAGAAACCTTTTACTTGTGAAATTTGTGGAGACCGGTTCCGATCTTCGAGTATAATGAATGTtcataagttaaaaaaacattcgGATAAAAGCAATAGTTGTCCGTTATGTTCGAATAAGTTTCATACAGTGAGAGATTTAAGGAGACATGTGATTAAAGTGCATTGGAAGCAGAAAGATAAAAGATTTGACCCTCGAGAGATGAAAGGGTTGGATAAAGAACATTATCATTTGTTTCACGATGGGAGGAGGGTTAAAGTTGCTGAGGAAGATGTGGATATTTATATGCCTTGTTCATTGTGA
Protein Sequence: MDEDIFPELCLMNTKKTYSKTPKKQGNAPPVSNNVKEASKPSGKVSELGEPLTTKVAVEYLLSGKLKSEVCRYCLRISPGLSELDQIMQIAGTGAIYKITIREMIACFYPFKVSENQEFPESICQKCVDKALNAYLFTQQCEQAERALNNCFIDMDEKLTKLDPIDRPKKRGRQKLKPNYNVLYAEHKKVMDYAEPIRHLINLQTESLSNEPVWNEFECKKCWQVLPNLETLLNHEKLHPKTMWYHCRLCGKAFIKHNQLKKHHTQVHVRGKQMSEADKTFKCKECGNITENYEQHLQHIEKHKFKSVMEHLIEKKTDQLCLICLKKSSNLVELDKMVCIHGSCPELVGDKTLYTVLASTLPDMLYLHNFIGTKICEQCLNHAITSYVFIHQFIFTRERLDLCIGLMLENLKDIEPHTNVFVQVSPPVIMAPPEIDETLLLDENEPIDETKLKVDVLEDEFRLKSDSESEEDRPVEMKPDVKTEYKVDLTPIPDIENLARTATKTYRNKKLVNGLQSNSNNKYPVDVCSEFLTFNKKKKVKKVLVKYTCPICSKHFISDYFLKRHILKHVSKKVQCIICASKFKSKFYLYEHTKMEHLLKQSFYLSCRICGRTYTDVLKLQTHERQHYLKACQLCNKVYATQAHYDNHIQRHSTKLKMLKDKRAQTCSFCEKECSNDNELSLHVNKIHLQIKPYNCDMCERQFYTENNLKNHKKGENFLAHTQICNSCTEKLIQAYIFIENAKETFKIIDNYVNDLFKKSDEIYHHLPEAQIESSNVVIVLDNVLNDVITEKERIDILKQDINKVPENKNEFQEVKKETPKTKYSKFKCTKCLVKLPSYRALKLHRYTCMKQKIECKICFKRFRNQQYLNSHYKVHASLRCKICHEILHEEELLEHLKIKHIDSLHTCSQCNEVFYTLNTLQTHEKICHKIKGENPHCLMCLKTFTEEELKLHNCKYNCPECSEVPCMHYKYLMFYREQILNRAGKAKCLDCDYVCRRKEILLGHVNREHLDHHPFTCDKCGQQFYSKIVLTSHIHKFHEDFFVCRFCDSEFSNINTYTQHVEACEDIERSFVCDECPASFDSSDNLTKHIKCRHSTDVFPCGLCNKKFLKDSKRKEHMVKVHSGLQSKNKVINVQCVVCQETFDTKGELVQHMRSHGPNTTYPCRICNTEYETLRQFRAHYRKHNGPFATCHICGKEMREILLKKHLTTHTNSIETCETCGRSFPNIALLKSHQKVHLENVPCPKCNKMINPARLRRHWRRHLMEENPGNTGIKKQQPNLKCERCDYKTWNNTLLECHMNRHHLKIKPYVCHICSKDFIGKHLLKKHIETHNMKSVMCMVCLKSFANSACLKMHLRLHTGEKPFTCEICGDRFRSSSIMNVHKLKKHSDKSNSCPLCSNKFHTVRDLRRHVIKVHWKQKDKRFDPREMKGLDKEHYHLFHDGRRVKVAEEDVDIYMPCSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -