Basic Information

Gene Symbol
Ncor1
Assembly
GCA_002150865.1
Location
KZ118429.1:128279-180026[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-08 2.3e-05 24.5 0.0 1 43 439 481 439 483 0.97
2 2 9.9e-09 1.2e-05 25.4 0.0 5 46 863 903 863 903 0.96

Sequence Information

Coding Sequence
ATGAAATTGCATCAGTCATCGAGCGAGACGAACAGGCCCGGGCAAACGGATCACGGGCACGGCGGCGGCGCGCTGGCGTACGGCGGCAAGCCGGCGGCGGGGGGTGTGGTGGCGCCGCCGCAGCCCCGGCCTCCGCCCGCGGCGCCCTACGCTCCGCAGCCCTACCCTCCCGCACAGCTGCGCCTGCACCAGCCAGGATATGGATCTGCGGCATTATCATATAGGGATAGCAGCTACGtccgcggcggcggcgcggtgGGGTCGGTGGGCGGCGTGGGCGCCGTGGGCGCTGGCGCGGCGGGGGCCGGCGAGTACCGCGGCGGGCGCGTGTCGCTGCTCGGCGCGGCCTACCTCCCCCCGCCCGCGCCCACCGCGCATCACCCGCCCCCCGCAGACCCTCCGCCTTTCAAGAAGATCAGACTCTCAGCTGATCGGACGCCGCTGTCACATCATCAGCCGCTTAGGGTTGATACTAGGGAGCCGGTGAACCAGTATAGCACAGTAGAAGTACTATCTCCAAATCCCCCTTCGGAACCCACGATGGAGGATCAGAGCTTTAGGACCACCAAGGATGACTTATTACAACAAATATCCAAGGTGGACCGGGAGATGGCGTTATCAGAGTCAACGCTATCCAAACTGAAGAAGAAGCAGGAAGAGTTAGAACAGACTGCCTCGAAGCCCGCCAGGGCTGAGGAACCTGAGGAAACCGTGCCTCGGCACCGGAGCCTCGCGCAATGCGTCTACGCAGAAAATAGGAAAAAGCAGGCATCATCAGCCCACGCAGTGCTCTCACACCTGGGTCCGCCCGTCCTCTACCCGTTGTACAACCAGCCCCAGGACACAGAGGTCTACCACGAGAATATTAGGAAACATAGGACCTTTAGGAAGAGGTTGGCTGAACATATTAGGAAGCTCAAACTTGAGGCTGAGAAGCGGGAAGACGCATTAGCAGAAGCATACAGCAGAAGAGCAGCAGAATGGTTAAGAAGAGTCGAGAGGATAGAACAGGGACAGAAGAGGAAAGCCAAGGACGCCAGAAATAGAGAATTCTTTGAGAAGGTGTTCCCTGAACTAAGAAAGCAGCGCGAAGAACGAGAACGGTTCAACCGATTAGGCGCCCGAGTGAAGTCTGAAGCCGAGCTTGAGGAGATCGCAGACGGACTCCACGAACAGGAGCATGAAGACAAGAAGATGAGGTCCTTGACTGTGGTGCCGCCGCTGCTGAGGGACCCTAGTGATACCACGCCCGTTTATATTGATACTAATCGACGGTGCATGGACATGGAGTCGGAACACAAAGAGCTGCAACTCCGCAACGTGTGGTCTCAGGCTGAACGGGAACTCTTCCGCGAGAAGTACCTCCAGCACCCCAAGAACTTCGGACAGATCGCATCCTTCCTGCCGAGGAAGAGTGTGCGGGACTGTGTTAGATTCTACTACCTATCAAAAAAAGCGGAGAACTACAAGCAGCTGCTGAGGAAGCCGCGACAGAGGCGGTCGGCTCGGAACCCGCCGCGAGCGCAGCCCGAGCCCGAGCTGCCGGCTGGAGTCACCACCAGGCTGCAGCGGAGCCAAGGTACGACAGCGCGAGGGACGGAGAACAAAGAGCCGAACATGGATGAGAGCATGCCACAGGTCACTGACCCCGTCACCTGCATACCTATACCTACCGCAGCGCCCGCGCAGCCACCTAGGTCGGAGTCAACACGAACGCCTCCTCTACCCCCGTCGCCACCACCAGCTTCTTCAGCCCCGCCCGCGCCGGTCACGTCAACAGCCACGCCGATGTCGGTGGCGGGAAGCCCGGCGGCGGCGCCTACGCCACCGGCTGTCGACGTGCCGTTACCGCCCGTCACGTCGGCTGATGTTACGCTTACTATTACACCTGTTTCGACCCCAATAACAACGACGACAGCAACAAGCGTAGCACCGACATCGTCACCAGTGACGTGCATAACATCGACGGCAGCGGTAGCCGCAGCGACGCTCACTGCGCCGGCCATGTCGACCGGCAGCAATAGCAACAGCAACGGCAGCAACAGTATCGGTAGTGGCAGTAACAGTAATGGCAGTGCCAGTGGAAGTGCCCCGCCTACGCCGCAGCCGGCACAGCCACCTACGCCGACGCAGCCGCCGCCTACACCTGAGACCGCGGTAACAGAACGCATCGGAACCCCCTCATCAACAGCCACGGTTACCACGACAACGATAACAACAACATCCTCAAACTGTGCCGTCTGCAACATGTCCGGTGCCACCCGAACGGTCTCAAGGTCTCGAGCCATCCACTACGGGCTGAAGGAGGAAGCTGTAGGGGCGAGGGTCTGCGAACCCTGCCACTGCAGGTGTGTGCGGTCCCGGTACACCAGGTGCCCGGTGCCCACGTGTCCTGGACCGAGGGTTAGGGCGAAACGGTTGAGGCATTTACCGCCGAGGTGGCATGATCTCTCGTTGGAGTTGAAGAGGCCACTTATGGAGGAGTTCGAAATCCCAAGCGAGTTAAGCAAGTGCTGCCTAGCTTGCTTCAAGCGGATAACTCGACGGTTAGAGACCGTGGTGGAGGGAGGCCTAGCTCCTGAGCCCACGGAGGAGGAGGCGGCGCGGTTCCGGTCACTGCTGCGGGAACACGGCACGGCGTGGGACCGGATCGCGGCCGTCAGTGGGAGGACACCAGCTAGTTTGAAGGCGTTCTACTTCacttatagAAAAAAGCTGCAACTAGACACTTCAGTAGCCGACCGACCTTCCGGTCCTCGCAGCTCCACAGAAGACAGTACCCTATCCTCAGCGGATACCGACACGGCCAGCGGCGGCAGTCCCGCGAGAGCACCGCCCGCACAGCCGGCGCCGGCGCCTCGGACTGATGCCGTGGCGCCGAGGAGACCGCGCAGAGATGAATATGACTCGTCGGCTACGGAAACTGCTGATGAGGAAAATGATGCTCCTAGTGCTAAGATAATCCCCCCCACCTCCGTCCCCACGGTGGTATCATCCTGCGCCGCCAGCGCGGTATCGTCACCCGTGACGACGACGCGCAGCACCGCGGCGCCGCAGACCGTGCGCGACGTGGTGCTCAACCTCATCGAGATCAGCCTCACCAGAGACTCGCAGCCCACACATCCGAGCATCAAGCCGCATCAGATCAAGGTGACGTCATCATGCGCGAGCGGTCGCGAAGCCCTAGCAACACTAAGCGTAGTAAACAGCTCCCACGTGGGCAACAGCGGCGCCGTCAGCCCGCAGCGCGCCGCCACCATCACCCCCCTCACCCACCCCACGGCCGACAAGGACGTCATGCTGCTGCACATCGAGCCCCGCCCCGAGCGGCCCGAGCGGCCGGAGCGGCCCGACCGGCCCGAGCGACACGACCGCCACGAGCGACACGACTTGTTGCTGCGACAGGAGCGACACGAGCCCTTGTTGGATCTCAGCGTGAAGCGGCCGAGGCATGATCAGCCGTTCCCGCATCCTAATAAGTCGGTATACCGAAACTCAACGGAATACAGACCACAGCAAGAACGGGAATCCCCCAACCAGTACAACTCGAAACCTAAAGCTGTTGGGGCACCCCCAAGACCGACCCTCAAACCAGCTCCTAATCCCAAGGGGTCCATAACCCTCGGTACTCCAGTAGAATCGAGGTTCGAGCCTCACAGGAACCCTCCGGAGGCCAAAACAGGGTCGATAACAGCCGGGACTCCGGTGCATGGGACCCATCACCTTCCTGACAAACGGACCCTGGACTTCTATAAGAGAAGGAGTCCAGGCGGCCCGGGGGCGTATTACGCGGCGACCAGTAGTCAACCTAGGCCGCAGTCGCCGTCGTTTTCACCTACGGGCAGCTCCAGCTACACCCGGAACCCCTACGGACTGGAACAGCGTCAGATCATAATGGCGGACTTCATCACGTCGCAGCAGATGCACGGCGGCGCCCGGCGCGAGCGCGAGCGGGCCGCGTCGCCCGGCTTCCGGCGTGATGCCGTCTCTGTTATACAGAGGCATACGCCGCATGCTTATCCACATCCGCCTCCCGATGAGCGGGCGGCGTCGCCGCAGTACCGGCGGGACGCGCTCTCCGTCATACAGAGGCACTCTCCCCAACATGTGTACCAACATCAGCATCCGCAGCCGCCTCCAGGTCATGAAGCGTTCACATCGCTAGTAGACGTGGCGTCAGCAGCGACGGCGCTGCCGGTGCCGCGCGGCTCGCAGCCCGACGGCAAGCCCGAGCCCAAGCAGCAGccgcagcagcagcagcagcagcagcatcATGATCTCAGATTCATGGCGCAGAAATTCCCGCTCGGATCTCAATTCCcgCAAATGATGGACAGAAGAGTACAGTCGGAACAGCAATACATGGAAAGAGAAAGACAGATACAAATACAGAGGAGGGGAGCtGTAAACGCGATCCACGCGATCCACGAGCGTCACGCGATGGAGCAACAGCAACAGCATCAGAACCAGCAACAGCATCAAGCGCAGATCATACACGACAGACATATGCAGCACTCCATCCACGCGATGCAAGAGCGTCACGCCGAACAACAACACCAACAGCACCAGCAACAGCAGCAACAGCAgcaacagcagcaacaacaccaacagcagcagcagcaacaacagcaacagcagcaacaacaacaacagcagcaaCAACATCAGCAGcaccaacaacaacaacaacagatTATACAAGAAAGACATCATCAACATCTTATGAGCGTATCGTCTCAAGATGGCGAGCGTCGCATGGTGCAGTCGGTGACGTACAGCACGGCCGCCAAGCCGAGGGCGCAGACGCCGCACCATCTAGAGAGGAAAGACAATCGCACAGTAGTATCGTCGGTGGCAGTGGGGCAGCCCcccgcgggcggcgcgggggcGGAGCCCCGCGCTCGGGCGGCGGAGGGCACGCTGACGGCGGCGTCGCTCATCGACGCCATCATCACGCACCAGATCAGCCAGAGCTCCGACCAGAGGTTCCCGGAGCGTCCAGACCGCGGTGTAACGCCGGCAGAGGAAGCGGCGGCCGCGGCTGCTGCACATACGACGAGCATCAAGCTGGGAGACCTCGCGTCCAACATCATCACGCGGGACTTCTGCAGCCCCACCACCTCTGTCATGCACCACAATAACCGGTTCAGCGTGGGTAACTCGGAAGCGTACGCGTCGGAGGAGTGGAAGCGTCGCGACGCTCCCAAGCACGCGCCCTACCTCGAGCCCGTGTCGCCGCCAGACAACCATCCCGCTAACAGAAACAACAGCAACCGGCGCTACAGCTGTGTAGGCTCCTCCCCCAGCAGTGGTTCAGGCGGGGCTTCCAGCGTGGGCGGGGCGGGGGGCGGAGTCCTGACCGCCTTCGACTACGTGACCAACCGCATCGTGGAGGTGATGCGAAGTGACGCCGACGAGCGAAGTAAACCGCTCACCTTCCCCACTGCGGCGTACGCGTACCCGTATTCTGCGCTTAATGTTGCTGCTGCGGCCGCGGGGGATGCCTCCAACAGCACAGTCTCAGCAAGCCCAGCGCCAGCCGCGGCaccggcgccgccgccgccacccgAGCCGGCGCCGCTGATGTCAGCGCAGTACGAGCCGCTGTCGGACGAGGACTGA
Protein Sequence
MKLHQSSSETNRPGQTDHGHGGGALAYGGKPAAGGVVAPPQPRPPPAAPYAPQPYPPAQLRLHQPGYGSAALSYRDSSYVRGGGAVGSVGGVGAVGAGAAGAGEYRGGRVSLLGAAYLPPPAPTAHHPPPADPPPFKKIRLSADRTPLSHHQPLRVDTREPVNQYSTVEVLSPNPPSEPTMEDQSFRTTKDDLLQQISKVDREMALSESTLSKLKKKQEELEQTASKPARAEEPEETVPRHRSLAQCVYAENRKKQASSAHAVLSHLGPPVLYPLYNQPQDTEVYHENIRKHRTFRKRLAEHIRKLKLEAEKREDALAEAYSRRAAEWLRRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPSDTTPVYIDTNRRCMDMESEHKELQLRNVWSQAERELFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRQRRSARNPPRAQPEPELPAGVTTRLQRSQGTTARGTENKEPNMDESMPQVTDPVTCIPIPTAAPAQPPRSESTRTPPLPPSPPPASSAPPAPVTSTATPMSVAGSPAAAPTPPAVDVPLPPVTSADVTLTITPVSTPITTTTATSVAPTSSPVTCITSTAAVAAATLTAPAMSTGSNSNSNGSNSIGSGSNSNGSASGSAPPTPQPAQPPTPTQPPPTPETAVTERIGTPSSTATVTTTTITTTSSNCAVCNMSGATRTVSRSRAIHYGLKEEAVGARVCEPCHCRCVRSRYTRCPVPTCPGPRVRAKRLRHLPPRWHDLSLELKRPLMEEFEIPSELSKCCLACFKRITRRLETVVEGGLAPEPTEEEAARFRSLLREHGTAWDRIAAVSGRTPASLKAFYFTYRKKLQLDTSVADRPSGPRSSTEDSTLSSADTDTASGGSPARAPPAQPAPAPRTDAVAPRRPRRDEYDSSATETADEENDAPSAKIIPPTSVPTVVSSCAASAVSSPVTTTRSTAAPQTVRDVVLNLIEISLTRDSQPTHPSIKPHQIKVTSSCASGREALATLSVVNSSHVGNSGAVSPQRAATITPLTHPTADKDVMLLHIEPRPERPERPERPDRPERHDRHERHDLLLRQERHEPLLDLSVKRPRHDQPFPHPNKSVYRNSTEYRPQQERESPNQYNSKPKAVGAPPRPTLKPAPNPKGSITLGTPVESRFEPHRNPPEAKTGSITAGTPVHGTHHLPDKRTLDFYKRRSPGGPGAYYAATSSQPRPQSPSFSPTGSSSYTRNPYGLEQRQIIMADFITSQQMHGGARRERERAASPGFRRDAVSVIQRHTPHAYPHPPPDERAASPQYRRDALSVIQRHSPQHVYQHQHPQPPPGHEAFTSLVDVASAATALPVPRGSQPDGKPEPKQQPQQQQQQQHHDLRFMAQKFPLGSQFPQMMDRRVQSEQQYMERERQIQIQRRGAVNAIHAIHERHAMEQQQQHQNQQQHQAQIIHDRHMQHSIHAMQERHAEQQHQQHQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQHQQHQQQQQQIIQERHHQHLMSVSSQDGERRMVQSVTYSTAAKPRAQTPHHLERKDNRTVVSSVAVGQPPAGGAGAEPRARAAEGTLTAASLIDAIITHQISQSSDQRFPERPDRGVTPAEEAAAAAAAHTTSIKLGDLASNIITRDFCSPTTSVMHHNNRFSVGNSEAYASEEWKRRDAPKHAPYLEPVSPPDNHPANRNNSNRRYSCVGSSPSSGSGGASSVGGAGGGVLTAFDYVTNRIVEVMRSDADERSKPLTFPTAAYAYPYSALNVAAAAAGDASNSTVSASPAPAAAPAPPPPPEPAPLMSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-