Basic Information

Insect: Helicoverpa assulta
Gene Symbol: -
Assembly: GCA_029618815.1
Location: CAWLCW010000020.1:8971729-8978153[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0013 0.12 13.7 2.0 2 23 605 627 604 627 0.95

2 7 4.6 4.1e+02 2.6 0.2 3 14 647 658 646 667 0.80

3 7 0.0001 0.0092 17.2 2.5 1 23 675 697 675 697 0.98

4 7 1.7e-05 0.0015 19.7 1.0 1 23 711 733 711 733 0.99

5 7 1.4e-06 0.00012 23.1 0.9 2 23 740 761 740 761 0.97

6 7 0.0011 0.094 14.0 0.4 1 23 767 789 767 789 0.98

7 7 0.00092 0.081 14.2 2.9 1 20 795 814 795 815 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0013	0.12	13.7	2.0	2	23	605	627	604	627	0.95
2	7	4.6	4.1e+02	2.6	0.2	3	14	647	658	646	667	0.80
3	7	0.0001	0.0092	17.2	2.5	1	23	675	697	675	697	0.98
4	7	1.7e-05	0.0015	19.7	1.0	1	23	711	733	711	733	0.99
5	7	1.4e-06	0.00012	23.1	0.9	2	23	740	761	740	761	0.97
6	7	0.0011	0.094	14.0	0.4	1	23	767	789	767	789	0.98
7	7	0.00092	0.081	14.2	2.9	1	20	795	814	795	815	0.95

Sequence Information

Coding Sequence: ATGGAAGGATTCTGTAGAGGTtgtctaataaaatataatgaaccTATGGAGTTGCTGCAGTATACTGAAAAGAATAGAAGACTGTTTGTTTATTCCACGGGTTTGCAgGTGAAAAGAAATGATACATTCACATTCCAGCTATGTAAAGACTGCTTCTTAAACATGAAGGCAGCTTGTAAGTTCAAGAAACTGTGTCGGACCTCAGATAAACGCTTTAGGAACTACTTAGCAATCAAAGATGTTGGGGATCCTCTGGACTTCTGTACATTCCTTAAAAATAGTGATGACACTTTAACATTCCGTCTACCAATGACAAGTGGAAGCAGTACACCAGCAAACCAAAAATGCAGAGATGATGATAATGAATCAACATGCACAAGTATCCGTAACTTCATGACGGATATCCTACAAGGCGAGGAGATGCCGGACACTGAGGCGAGAATCATTAAAGAGGTCATAGAAGAAGAAGCTGATGTATTGGATGACTCGCTTGATTCACACTGGTTGCAGGATGATATGTCCATTGATACAGATTTTAGACTGGATTTTAGTTTCAGCCCGTTTTCAACACCTCGCACTGTTAACAATGATCGATGTTACACGCCCAAGAAGTATGTAGAACAGAAGGAAGAACAAATCAATTTTTACTCTGTAAACACTGAAAAACAGTCCGAAATATTAAAAGATTTTACAGACGCTTTTAAAAACAATGATGTATTGAAAGGTTTTGAACTTGACAAAGTTAATCATATTGAAGATAATGAGAAACAAATAAGTACTTTTGATATAGATGAAATTGATGGTAAATATGAAGGAAAAAGTAAAACTGATatcaataattacaaaaatttaAAGGAACTATGCAATTATGGCTTGGATGACATTGATGGTGTCGGGAAATCTGTTAATAATTCTGTGAAACAAAATCAAAAGTTGAAAGAGCTATTAGATCTAAGTCTAGATAATATTGACAGCATTGACAAGCCAGACAGctgtacaaataaaacaaatcaaagTCTAGGAGAATTATGTGATCTTAgtttaagtaattttgatgaTTCAGAAAGATCTGAAAGTAATACTTTCAAAGATGATCGCTGTGTTAAACAATTATCTGTTTTTGAAGAAATCAATGCAATTGGTAAATCAGTCGGAGGGTTAGAGTTGCCAAATCTAAGTATTTTAGATAAGACCAAAATAAGCGTATGCCCAACTAAAGATGTGATTGGGTCTATACAACCTGCTGAAATGAGTAATAGTAGTATTAATATTGAAGCGTTATTGAAAGACAAACCCTGTACAATAGACAGAAATTTAGAAGAGGCACTAAAGAATACAGATAATAAAGAGTTTTCTTTGGATGATTTACTTGTTTCTCCACCGGTGTACCAACAGTCAGCTGCCTCCACGCCaacaataaataacatattatttgGCGAGAAACTTGATATAGTCACCACTAACAATATAAATCCGCATATTGGACAATGTATAGAAACATATGACAATGTACAAGGTGATATAGAAATATTCGAAGAATTCTTCCAAAATGATACGAAAGAATTTGATTTGGATGATATCAAGAAAGGAAACGGTGGATTTAAATCAGAAATTGATCAAGGAACTATTGTTCTTGAAAATGGTACTGTAGATTATAAGGAAAATGAGATAATGAGTATGGATGTAGATATACCTGATGTTATCAAATTAGGTACAGGTAACAACAACCATATTCCTAAATCAACAACTGAGAATACTGTAGGCGTAGTATCTAGTACAACTGAAAATCAAATATTTGATATAGAAACTACCTCATGTAATCTGTGCAACAAGCAATTTCGAGATGAAAGATCTTTGTTTatacatttaacgaaaaaacACAACATGAAAGTggaaaaacctaaaaaaaaacgaaaaagagccaataaaacaaaattgtgcAATAAATGTGGGAAGGAAATCAACGATAGTAGTGCAAATTACTCGAGGCACGTAAAAAAATGTGGGgaaCCCCAACAAACATTTAAATGCAACCGTTGTTTGGAAGAATTTAAGTCCGAAACGAATCTAAAGAAGCATATGACAAGTCACACAAACATGAAACCTTTGAAAATACCTAGCAAGAacGACTACGTATGTACCATATGTGGTACAAGCATGAATAGGCTCAGCAATTTCACTCTACACATGAGGCGACATACCAAGGACTATTCAGCCACGTGTAAAGTATGTGGCAAAGGTTTTTATAGACAAACTGAATTGATCACTCATATGAGaCAACATACCGGCGAAACTCCATATTCGTGCAGATTCTGCCCGCGGTTATTTGCTCGTAAAGACGTCTTGACTAGACACGTTCTAATACATTTAAATGAAAGATTATTCGAATGCGACTATTGTGGCTGGAAATGCTTTAAAAAATACGATTTACGAAGACATTTACAGTGTTGTATGAGAAAGCGCGGCAAACTGCCTAGCGAAAAAAATATGGCGGATGATAAGAAAGAAAAGGAACAGATTACTGTGATATATACTACGGGCGACGATACCGCgattaaaaaacaattgccGTTCATAGAAACTGAATTGAGTAATTAG
Protein Sequence: MEGFCRGCLIKYNEPMELLQYTEKNRRLFVYSTGLQVKRNDTFTFQLCKDCFLNMKAACKFKKLCRTSDKRFRNYLAIKDVGDPLDFCTFLKNSDDTLTFRLPMTSGSSTPANQKCRDDDNESTCTSIRNFMTDILQGEEMPDTEARIIKEVIEEEADVLDDSLDSHWLQDDMSIDTDFRLDFSFSPFSTPRTVNNDRCYTPKKYVEQKEEQINFYSVNTEKQSEILKDFTDAFKNNDVLKGFELDKVNHIEDNEKQISTFDIDEIDGKYEGKSKTDINNYKNLKELCNYGLDDIDGVGKSVNNSVKQNQKLKELLDLSLDNIDSIDKPDSCTNKTNQSLGELCDLSLSNFDDSERSESNTFKDDRCVKQLSVFEEINAIGKSVGGLELPNLSILDKTKISVCPTKDVIGSIQPAEMSNSSINIEALLKDKPCTIDRNLEEALKNTDNKEFSLDDLLVSPPVYQQSAASTPTINNILFGEKLDIVTTNNINPHIGQCIETYDNVQGDIEIFEEFFQNDTKEFDLDDIKKGNGGFKSEIDQGTIVLENGTVDYKENEIMSMDVDIPDVIKLGTGNNNHIPKSTTENTVGVVSSTTENQIFDIETTSCNLCNKQFRDERSLFIHLTKKHNMKVEKPKKKRKRANKTKLCNKCGKEINDSSANYSRHVKKCGEPQQTFKCNRCLEEFKSETNLKKHMTSHTNMKPLKIPSKNDYVCTICGTSMNRLSNFTLHMRRHTKDYSATCKVCGKGFYRQTELITHMRQHTGETPYSCRFCPRLFARKDVLTRHVLIHLNERLFECDYCGWKCFKKYDLRRHLQCCMRKRGKLPSEKNMADDKKEKEQITVIYTTGDDTAIKKQLPFIETELSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00784704;
90% Identity: iTF_00784704;
80% Identity: -