Basic Information

Insect: Helicoverpa assulta
Gene Symbol: Bcl11a
Assembly: GCA_029618815.1
Location: CAWLCW010000006.1:1911768-1922080[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.18 16 7.0 6.7 1 23 281 303 281 303 0.93

2 12 7.8e-06 0.00069 20.8 1.5 2 23 311 332 310 332 0.95

3 12 1.1 1e+02 4.5 0.7 1 23 336 358 336 358 0.94

4 12 0.074 6.5 8.2 5.1 1 23 363 386 363 386 0.97

5 12 0.00015 0.014 16.7 0.1 3 23 392 413 391 413 0.96

6 12 0.017 1.5 10.3 0.1 3 20 430 447 429 453 0.92

7 12 0.00012 0.011 17.0 0.8 3 23 463 484 463 484 0.98

8 12 0.05 4.4 8.8 0.7 2 23 503 525 502 525 0.97

9 12 0.0006 0.053 14.8 4.0 2 23 537 558 536 558 0.96

10 12 0.00047 0.042 15.1 3.3 1 23 564 586 564 586 0.99

11 12 3e-06 0.00027 22.1 0.3 1 23 592 614 592 614 0.98

12 12 0.00095 0.084 14.2 1.5 1 23 620 643 620 643 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.18	16	7.0	6.7	1	23	281	303	281	303	0.93
2	12	7.8e-06	0.00069	20.8	1.5	2	23	311	332	310	332	0.95
3	12	1.1	1e+02	4.5	0.7	1	23	336	358	336	358	0.94
4	12	0.074	6.5	8.2	5.1	1	23	363	386	363	386	0.97
5	12	0.00015	0.014	16.7	0.1	3	23	392	413	391	413	0.96
6	12	0.017	1.5	10.3	0.1	3	20	430	447	429	453	0.92
7	12	0.00012	0.011	17.0	0.8	3	23	463	484	463	484	0.98
8	12	0.05	4.4	8.8	0.7	2	23	503	525	502	525	0.97
9	12	0.0006	0.053	14.8	4.0	2	23	537	558	536	558	0.96
10	12	0.00047	0.042	15.1	3.3	1	23	564	586	564	586	0.99
11	12	3e-06	0.00027	22.1	0.3	1	23	592	614	592	614	0.98
12	12	0.00095	0.084	14.2	1.5	1	23	620	643	620	643	0.98

Sequence Information

Coding Sequence: ATGGGAGACGTACAAGTGTGCCGTATTTGTCTTAACATGGGTGTAACAATGCAGGACCTGTTGGCTTACCCCTTAGAAACTTATTTTGCATCATTCATGATAGAGAGCAAGccAGTACACACTGAACTACCTCCGTATGCTTGTTATGAGTGTGCAGCACTCCTGAAGAAGTATCATGAGTTCAAGCAGAAGTGTCTGCAAAGCCAGGGCCTGCTGTGTGGGATCATTGATGATTGTGGAAAgATTACACCACCACAAATAAAATCAATCAGCAGACAGAATCTTCTAGCAGTTTCTAAAGTCTCTCAAATTGACATACTAGTAGAAAAAAGCACAAATACACTCAACATTGACCTTCCTTACACATACATAGTAGAAGAAACTACAAACTTTCTAAACATAGACCAACCAAACTTCATGgttgaaaatattaagaaagAGGACCATGATGACACGGAGGTACCTGATGAAATTACTCCTGGTATATCCAGTGATGAAGAAGAGTCTGAGAATATTGGGAAGAAGTTACGAGATTTGGAGAAGGTTGATATTTGTGTGAAGATGGACTTGGAGGAGGAATCTGATGGTTCTGAGCTCCCAATAACCACAGTTGATGTAAAAAGGCAGCCCCTTAGTAAATCGCGAGCCTCAACTAAGAAGGAAGGCAGACTAAAGAGGAATAATACTAGAGCTACTAAAAAAAGGTCGGCTGAAGTTAAGGATGATAGCATCTGTGAAGACGAGGGTTTAGATGATATTACTGTTGTTACTTTATCGCTAGAAGAGCAGTTGGAAGAGATAAACAAACGCAAGCAGTCGACCAACTATCTGAATTGCCCTTACCAGTGTCACTTGTGTTATAAGGGGTTCAATAAAACACTGACGTGGAAACATCACCTTAGTAAACATTCGCCGAACGCTGGAGACATAGAGTGCAATATCTGTAAATATAGATTCAAAACGAAAAGGAATTTACAACGACATGCTCTGAATCACGGCAAGAAATATCTGTGCAACTTATGTTCATACAACTCTAGCAATATTACAACAGTGAAGCAGCATCAAGGATCACACAAGGGCGTGACTCATAAGTGCAACTTTTGTGATGAAGTCTTCACAGTTCGAACAACATACGTCTGTCACATGCGTATAAAACACCCTTCTGAGAACATCTGCGGTTACTGCGGCTACTCGTTCTACAGTAAACGCGGACTCATCGTACACAAGAACATGGTGCATAAGGACGTTGATGAGAACGCAGAACAGAGCACAGAGGCGGGCCCCTACTGCGCGGAGTGTGATGTCAAGTTCATCTCTACTGAAGCGTACAAGCGACACATGGTCATGTCGGTCAAGCACACGCAGAGTACGGAATCTATTAACGGGTGCCGTGTCTGCGGGGCTACCTTCAGGGACCCTGAGGAGTTGCGGCTGCATCATCGCAAGGAGCACCCGAAGAGACAGCCCAAGCATTACAGGGCGAAAGCTGTTACCAAGTGGCCGACACAGTGTGAACATTGTCCGCAAGAGATTGAAAGTGCGCGTGCCTATTGGAAACATTTCCGAACGATGCATCCCAATGAAAACTATCCGGTCCAGAAGAAATGCGTCTGTGATATATGCGGGAAGCGATTTACGTGCAATGCTCTCCTAACAATCCACAAAAGGACGCATATAGGCGAGCGTCCGTACAAATGTTCACGCTGCGACCGCGCGTGCTACAGCGCCTTCGACTTGCGCATCCACCAGCAGAAGCACTCGGACGCCAGGCCCTTCCCCTGCACCCTCTGTGCTAAGGCTTTCAAGAGGAAAGAGGCGCTGGAACGGCATTTGAAGATCCATTCTGGCGATAATCCTTACAAATGTGAGATTTGTGGCGTGGCCTTCAACAAGTCCTGTACGCGAACCCTTCATGTCCGCACCGTACATACCAAGGAACCAGCGCCGCCGCGGAAACGAAggaacaaaattaacaaataa
Protein Sequence: MGDVQVCRICLNMGVTMQDLLAYPLETYFASFMIESKPVHTELPPYACYECAALLKKYHEFKQKCLQSQGLLCGIIDDCGKITPPQIKSISRQNLLAVSKVSQIDILVEKSTNTLNIDLPYTYIVEETTNFLNIDQPNFMVENIKKEDHDDTEVPDEITPGISSDEEESENIGKKLRDLEKVDICVKMDLEEESDGSELPITTVDVKRQPLSKSRASTKKEGRLKRNNTRATKKRSAEVKDDSICEDEGLDDITVVTLSLEEQLEEINKRKQSTNYLNCPYQCHLCYKGFNKTLTWKHHLSKHSPNAGDIECNICKYRFKTKRNLQRHALNHGKKYLCNLCSYNSSNITTVKQHQGSHKGVTHKCNFCDEVFTVRTTYVCHMRIKHPSENICGYCGYSFYSKRGLIVHKNMVHKDVDENAEQSTEAGPYCAECDVKFISTEAYKRHMVMSVKHTQSTESINGCRVCGATFRDPEELRLHHRKEHPKRQPKHYRAKAVTKWPTQCEHCPQEIESARAYWKHFRTMHPNENYPVQKKCVCDICGKRFTCNALLTIHKRTHIGERPYKCSRCDRACYSAFDLRIHQQKHSDARPFPCTLCAKAFKRKEALERHLKIHSGDNPYKCEICGVAFNKSCTRTLHVRTVHTKEPAPPRKRRNKINK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00784675;
90% Identity: iTF_00784675;
80% Identity: -