Basic Information

Insect: Helicoverpa assulta
Gene Symbol: -
Assembly: GCA_029618815.1
Location: CAWLCW010000017.1:5255451-5268381[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.9e-05 0.0078 17.4 2.2 1 23 430 452 430 452 0.97

2 20 0.0046 0.41 12.0 0.6 1 20 458 477 458 480 0.94

3 20 2.3e-05 0.002 19.3 5.6 1 23 499 521 499 521 0.98

4 20 0.00011 0.0095 17.2 4.1 1 23 527 549 527 549 0.99

5 20 4.1e-05 0.0036 18.5 5.3 1 23 555 577 555 577 0.97

6 20 9.4e-06 0.00083 20.5 7.4 1 23 583 605 583 605 0.97

7 20 7.9e-07 7e-05 23.9 2.9 1 23 611 633 611 633 0.97

8 20 0.00011 0.0099 17.1 6.7 1 23 639 661 639 661 0.97

9 20 0.00011 0.0098 17.1 6.5 1 23 667 689 667 689 0.97

10 20 5.4e-07 4.8e-05 24.4 1.9 1 23 695 717 695 717 0.98

11 20 5.5e-05 0.0049 18.1 7.9 1 23 723 745 723 745 0.98

12 20 8.8e-06 0.00077 20.6 6.6 1 23 751 773 751 773 0.98

13 20 1.1e-05 0.00099 20.3 4.4 1 23 779 801 779 801 0.98

14 20 4e-05 0.0036 18.5 5.9 1 23 807 829 807 829 0.96

15 20 2.4e-05 0.0021 19.2 7.1 1 23 835 857 835 857 0.97

16 20 3.4e-06 0.0003 21.9 6.0 1 23 863 885 863 885 0.98

17 20 6.5e-05 0.0058 17.8 7.9 1 23 891 913 891 913 0.97

18 20 2.7e-05 0.0024 19.1 7.7 1 23 919 941 919 941 0.98

19 20 0.0006 0.053 14.8 0.3 1 23 948 970 948 970 0.96

20 20 0.19 17 6.9 4.9 1 23 981 1003 981 1003 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.9e-05	0.0078	17.4	2.2	1	23	430	452	430	452	0.97
2	20	0.0046	0.41	12.0	0.6	1	20	458	477	458	480	0.94
3	20	2.3e-05	0.002	19.3	5.6	1	23	499	521	499	521	0.98
4	20	0.00011	0.0095	17.2	4.1	1	23	527	549	527	549	0.99
5	20	4.1e-05	0.0036	18.5	5.3	1	23	555	577	555	577	0.97
6	20	9.4e-06	0.00083	20.5	7.4	1	23	583	605	583	605	0.97
7	20	7.9e-07	7e-05	23.9	2.9	1	23	611	633	611	633	0.97
8	20	0.00011	0.0099	17.1	6.7	1	23	639	661	639	661	0.97
9	20	0.00011	0.0098	17.1	6.5	1	23	667	689	667	689	0.97
10	20	5.4e-07	4.8e-05	24.4	1.9	1	23	695	717	695	717	0.98
11	20	5.5e-05	0.0049	18.1	7.9	1	23	723	745	723	745	0.98
12	20	8.8e-06	0.00077	20.6	6.6	1	23	751	773	751	773	0.98
13	20	1.1e-05	0.00099	20.3	4.4	1	23	779	801	779	801	0.98
14	20	4e-05	0.0036	18.5	5.9	1	23	807	829	807	829	0.96
15	20	2.4e-05	0.0021	19.2	7.1	1	23	835	857	835	857	0.97
16	20	3.4e-06	0.0003	21.9	6.0	1	23	863	885	863	885	0.98
17	20	6.5e-05	0.0058	17.8	7.9	1	23	891	913	891	913	0.97
18	20	2.7e-05	0.0024	19.1	7.7	1	23	919	941	919	941	0.98
19	20	0.0006	0.053	14.8	0.3	1	23	948	970	948	970	0.96
20	20	0.19	17	6.9	4.9	1	23	981	1003	981	1003	0.99

Sequence Information

Coding Sequence: ATGAATCAAGAACACCACAATATGAACACGGGTGGTGGCCAGCCTCCGGGAAGTTCTGAGTCACAGGCACAAAGAGTTCAGGCCTCACAGCAGCAACAGCAAAATAACTTGCCTGCCACGACATCCGCCACTGATTTACGAGTGAACTCAGCTGCAGTGAACGTCGCTTTGTCTAGTGTCGCGAAATATTGGGTGTTTACGAATTTATTCCCTGGACCTATCCCGCAAGTGTCTGTGTATGGATTACCAGCTGGTGCCAGGATTGAAAATGGGAAACCTGTCCAAGATCTTGGTCAAGCTCATGCAAGTATATTAAATGGAGATCCTAATATTATTCTGGGCCACCATGCCGGCCAATCACAAGTCACAGTATCTGCGCCCGGTGGGCAGCAGATACCTGTGTCACAAATCATTGCCACACAATCTGGACAAACCCATGAAGCGCTTGTGGCCCATAGTCAGCAAGCCGAGCTGGCAGCGGCCCAGGGCTCCGGCAACAACGCTCAAGTGTCAGTTAGTGCTGGCCAGGCCACTCATCAGCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGACACCATTCACAACAACACATAATGCAGCAACAACTGATGGCTACGGCCAGACCTGAACACAGCAACCAACAGATTCAACTGACGGTAAGCGAAGATGGCATAGTGACGGTGGTCGAACCAGCAGGAACCAAAATGGTGGACAAGGAAGAATTGCATGAGGCCATCAAGATGCCAAATGATCATACACTGACAGTGCATCAGCTGCAACAGATTGTGGGACAACAGGTAATAGACAGCGTAGTTCGCATAGAACAAGCGACGGGTGAGCCGGCGAATATACTAGTGACCCACAACCCTGATGGCACCACTTCTATAGAAGCCAGCGCCGCCGACCCTCTCATTGTGAAGGATGAGAATAAAGCCAACAAGATTGAAACCGCACAGTTTGCGATACCTGCTGAGATAAAGGATATTAAGGGGATAGATTTAAAGAGTGTAGGCGCCATGGGAATGGAAGGCGCAGTAGTGAAGATTTCAGCCGGTGCTTCCGAACACGATCTCCATGCGATGTACAAAGTTAACGTAGAGGATCTCTCACAGTTGCTAGCTTACCATGAAGTCTTTGGGAAACTTAATTCGGAAGGCCAGCAACAACAAGCAAAGGTTATTAACGAAGTGGAAGTCGAAGTCGAAGCCGGCACCAGCGCAGCTATGTCAGAAGCGGAGTCCTCGCCCGGCCACCACTCGTGTGATATCTGTGGCAAAATATTCCAGTTCCGATACCAACTTATCGTTCATAGGCGTTACCACGGTGAAAGTAAACCATTCACGTGTCAAGTTTGCGGTTCCGCATTTGCTAATCCTGTCGAATTATCTAGGCATGGAAAATGTCATCTTGCTGGGGACCCGAACGAGAGACACGCAAAGAGGATGGCTACAGACAAGCCTTATGCCTGCACAACTTGCCACAAAACATTCTCCCGTAAAGAACATTTGGACAATCATGTTCGAAGTCACACTGGAGAAACTCCTTACAGATGCGAATTTTGCGCGAAGACTTTCACCCGCAAAGAGCACATGGTCAACCACGTGAGGAAACACACGGGTGAAACTCCGCACCGATGTGATATATGCAAGAAAAGTTTCACGAGGAAAGAGCACTTTATGAACCACGTTATGTGGCATACAGGTGAAACGCCGCACCATTGTACAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACAAACGATACGCCCTTCCGATGTGAACTGTGCGGCAAGTCTTTTACAAGAAAGGAGCACTTCACCAATCACATACTGTGGCATACGGGAGAAACTCCACACCGTTGCGACTTCTGTTCGAAGACGTTTACTCGTAAAGAACACCTGTTGAACCACGTTCGTCAGCATACGGGTGAATCCCCTCACCGTTGTAACTTCTGCAGCAAATCCTTCACGCGCCGAGAGCATCTCGTCAATCATGTGCGACAACATACAGGAGAAACTCCCTTCCAGTGCGGATACTGTCCTAAAGCGTTCACCAGGAAGGACCACCTCGTGAACCACGTACGTCAGCATACTGGCGAATCTCCACATAAGTGCTCGTTTTGCACAAAATCGTTCACCCGCAAGGAACACTTGACGAACCACGTGCGACAACACACGGGCGAGTCGCCGCACCGCTGTACTTACTGCGCCAAGTCTTTCACCAGGAAAGAACATCTTACTAATCATATCAGACAGCACACGGGAGAAACGCCACACAAGTGCACGTTCTGTCCGCGAGCCTTCGCGCGCAAGGAGCATCTCAACAACCACATCCGCCAACACACCGGCGTCACGCCGCATGCCTGCTCCTACTGCAGCAAGAGCTTCACAAGGAAAGAGCATCTCGTTAACCACACACGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTACTGTTCAAAGTCGTTCTCTCGTAAGGAGCATCTAACGAACCATGTACACCTGCACACCGGCGAGACGCCGCACAAGTGTCCCTTCTGTACCAAGACCTTCTCTAGGAAAGAGCATCTCACCAACCATGTCAGAATTCACACGGGCGAGTCCCCGCACCGCTGTGACTTCTGCCAGAAGACGTTCACGCGTAAGGAACACTTGACGAACCACTTGAAGCAGCACACGGGAGACACGGCGCATGTCTGCAAGGTCTGCTCCAAGCACTTCACCAGGAAAGAACATCTAGTTACGCATATGAGGTCACACAGTTGTGGTGAGCGTCCATACAGTTGTGGCGAATGCGGCAAGTCTTTCCCGTTGAAGGGCAACCTCTTATTCCACGAACGATCACACAACAAGAACAATGCAAATGCAAACAAGCCTTATCGATGTGAAATTTGCTCTAAGGAGTTCCTCTGTAAAGGTCATTTGGTATCACATCGGCGGACACATGCTGACTGGACGGACAACGCTCCGGCCAGTGAAACTCCGGCTGACACAGAAGAGTGCTCCGACGCTACTAAGTGTATCAAAGTTGAACCTGATAGGACAGAAAGGAAACATGAAGTTAGGACTAGTGTAGAAACGAGACCGGCTGAGAACAATGTCGCACAAACGCAACAAAATACTGCTACTGTGATGATAACCAATAATCAACAAGTCCGCGCGGCCAGCGTGGGCGGCGtgagcgcgggcggcgcgggcggcgccttCAGCCTGCCCGCGCAGCACCACGCCGCCGCCGGCCTCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNQEHHNMNTGGGQPPGSSESQAQRVQASQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAPGGQQIPVSQIIATQSGQTHEALVAHSQQAELAAAQGSGNNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHIMQQQLMATARPEHSNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDENKANKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQQAKVINEVEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMATDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFARKEHLNNHIRQHTGVTPHACSYCSKSFTRKEHLVNHTRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKNNANANKPYRCEICSKEFLCKGHLVSHRRTHADWTDNAPASETPADTEECSDATKCIKVEPDRTERKHEVRTSVETRPAENNVAQTQQNTATVMITNNQQVRAASVGGVSAGGAGGAFSLPAQHHAAAGLAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -