Basic Information

Gene Symbol
arid5b
Assembly
GCA_029618815.1
Location
CAWLCW010000025.1:437801-453062[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-13 1.3e-09 39.1 0.0 3 89 234 307 232 307 0.89

Sequence Information

Coding Sequence
ATGCTCAATTTAGAAGTCGTCTATGACGAAGTGCTCGCGATAAACGAGAAGGTGGTAGTCCGAGCTGATGACCTGCTCTCCTGGATGTGCGTCGGCACCGAGTGGCGGTGGGGGCTCCGCGCCGTGTGGCGAGGGGCGTGCGCCCCACCTACGGATATGCCCCGTCACGCCCCGTTGACACATACCAAGCTGGACTTCAGCGATGTGGATACTGAGAAGAGTGCTATGGTGGTAGACGCGGAGGCTCCCGGCGTGGTGGTGTTCTCGTACCCTCGCTACTGTCGCTACAGAGCGCTGATAGCTCGGCTGGAGGGCATCCAGGCGTCCTGGCTAAGAGACTCCCTGGTCGCCGCGCTGGGGGGGTACGCGGCCCCCACTAATAACACCAGGATATTGTATTGTAAGGACACATTTGAGTACCCAGAGCTGGAAGGCCACGAGTTTGTGTGCAACCACCTCGCGCCGCGGCTCAAGGGGAGGCCCCgcgggcgccggcgccgcgccctCACGCCCGACGCGCCGCCCGACAGGTCTGACCGCGCGTCTGATCGAGCGTCAGACCGGTCGGATTCTGATGATGCGCCGGCTAATGCTTCTGATCCTCCTACTCCCCGTCGCCTCTCTCTCCGCAACGGTGCCGCAGCCGTCAGCGACGACGACGACCTCGACGCCAAGGAGGTGGAACAGACTCCTGAAGACAGAGCCTTCCTCCACCAGCTCAAGATGTTCTACAAGAGTAGGAGCGAGCCCTTCCATGCGGGACATACGTTGAAGCATTTGTCGCTGCGCGCGCTGTACGGGTGGGTGGCGGCGCGCGGCGGGTACGCGGCGGTGTGCGCGCGGCAGCTGTGGCGCCgcctcgcgccgcgcccgccgcaccGCACCCGCGCGCACTACGAGCGGTACCTCTTACCCTTCGAGAACTACCAGCGTCGCAACGGCACAACCTTCAAACTAAACGGCAAAACCGACTCACCTCCCACAATCGCGACCATCGATGTCACCGACTCCCCCCTCCGAGACGACGACGTTAAAATCCTTCGCACCCCCTCACCCCCCCACAAGCCTGACATCGACTCCGAAACCGGAGAAATTACTACCAAAGATGACATTATAGTTAAGAACGCAGAAGAATTGAACAGGGAATTTCTAGAGTCGCTACCCAAAGAAGAGAAGACGCTGAAGATATCGGTGAAGCCAGTCGAGAAGTTGATTGAGCCGGTCAAGTTTGAGGAGAAGTTTGAGCGGAAGGAGGAGGGGACCGATATGAGTCAGAGTTACTTGGATGCGCAGAAGTTTGGGATTGCCGGCGAGTGTGCGTCGAGTCGCGCGGCGCCGCTCAACGGGCATGCGGCGCCCGCGCATGCAGACCTCAAGACGCGTCCACTAGGCCGCAGTTCCCTTCGCGCCGTCAGAGTGAAGCCAGCCAGACCACATGCCGCGGCCGCTACTGCACCCCACCCCTTACGACCGGACTCAGATCACAGTCCTCCCGCGGGTGCGGGGCCAGTGCCCCCAGTGGGATCCCAGTCAGCTCCCACGGCCCCCACGGCAGGGGGTCAGGGCGCCCCCGTCACCAACTTCGGCATACATCACCCGCCGACTAATACTGCGGTCGATGATGATATTGTTGAGGTCCCATACAAGCCTAAAACACCAGAAATCATCGACCTAGACGAGTACCCAGAAAGCCCACAGGCCGTCAAGAAGAAAAAACTAGACATCCTCAAGGAACGGGGGCTGGAAGTCACCGCCCTGCCCCCCTGGCAGGGGGTCAGCCCCCACATGATACCACCCCCCATGATCATCAACCCCGCCATGCAACACCAGATCATGACTCAAGCGCAATTATTCCAAATGTACAATATTATACCACAAAACTATAACAATGGTATTCAACCCCCTAAAGTTATACAAGCTTCCTCTATATTCGGTACCTCGGGGCCCGAGAAAACTGTCTACGGGAACCCCAAAGACCCCTTTATGCCCCCTCCGCACGTGTTACATGGGGTCCCAGTCAAACCGCTAAGAGCTGCACCCCCTACGCAAACGACCCCCCAAGATATTTTAGACCTTACATGCAAGTCAACTAGCCCCCCACCTCAGAAACCTGCTGTTGAAATAGTAAGAGTACCCCCTGCGCCGTCTCCTAACCAAACCGCGCAGAATTTAACTAAAAACTACACCCTCGTTGATGGCAAGGCCGTAGTGGGGTCTAACTTAGAAATTACATTAGTCAACAAAGCAGCCAGCCCAGGAAAAAACAGACCCCCTCAAAAAAGATCTAGCAACGGCAAATTCATGTCTGCAAAGACCCCAACACCCCCTAAAGAGGCCTACCCCAAATACACGACCCCTACTACAGCAAAAAAGCCCCCTATCAACATACCAAACTACCAAATTCGAGACGAATCACCTAACCAAAATGTTCAAAACGCGATGAAGAATCAAAACTTAGCTCAAATTATGGATTTGCAAAAGAATTCGGTACCTATGGGGTCATTCATGGACCCCTATATGGCCCTTTACAGCAGTATTGCGGGTCAAATGGACCAACGGCAGCTGGCTATGTATAGGGACCTTATGACCAACCAATTCAGGTACCCAGGACTCCTAAATCTAGGAGTAGCGACGCCTACAACGAAAAATTAG
Protein Sequence
MLNLEVVYDEVLAINEKVVVRADDLLSWMCVGTEWRWGLRAVWRGACAPPTDMPRHAPLTHTKLDFSDVDTEKSAMVVDAEAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRALTPDAPPDRSDRASDRASDRSDSDDAPANASDPPTPRRLSLRNGAAAVSDDDDLDAKEVEQTPEDRAFLHQLKMFYKSRSEPFHAGHTLKHLSLRALYGWVAARGGYAAVCARQLWRRLAPRPPHRTRAHYERYLLPFENYQRRNGTTFKLNGKTDSPPTIATIDVTDSPLRDDDVKILRTPSPPHKPDIDSETGEITTKDDIIVKNAEELNREFLESLPKEEKTLKISVKPVEKLIEPVKFEEKFERKEEGTDMSQSYLDAQKFGIAGECASSRAAPLNGHAAPAHADLKTRPLGRSSLRAVRVKPARPHAAAATAPHPLRPDSDHSPPAGAGPVPPVGSQSAPTAPTAGGQGAPVTNFGIHHPPTNTAVDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPWQGVSPHMIPPPMIINPAMQHQIMTQAQLFQMYNIIPQNYNNGIQPPKVIQASSIFGTSGPEKTVYGNPKDPFMPPPHVLHGVPVKPLRAAPPTQTTPQDILDLTCKSTSPPPQKPAVEIVRVPPAPSPNQTAQNLTKNYTLVDGKAVVGSNLEITLVNKAASPGKNRPPQKRSSNGKFMSAKTPTPPKEAYPKYTTPTTAKKPPINIPNYQIRDESPNQNVQNAMKNQNLAQIMDLQKNSVPMGSFMDPYMALYSSIAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00784181; iTF_01285330;
90% Identity
iTF_00784181;
80% Identity
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