Basic Information

Insect: Heliconius sara
Gene Symbol: -
Assembly: GCA_917862395.2
Location: OU860780.1:16271613-16278935[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0029 0.21 12.5 1.2 1 23 198 221 198 221 0.97

2 18 8.5 6.3e+02 1.6 5.5 1 23 303 325 303 325 0.97

3 18 0.0029 0.21 12.5 1.0 2 23 331 352 330 352 0.97

4 18 0.29 21 6.2 3.2 2 21 621 640 620 641 0.94

5 18 0.21 16 6.6 0.6 2 23 789 810 788 810 0.96

6 18 0.052 3.9 8.6 0.4 2 23 891 912 890 912 0.96

7 18 0.096 7.1 7.7 1.4 1 23 920 942 920 942 0.97

8 18 0.12 8.7 7.4 3.4 1 23 978 1000 978 1000 0.95

9 18 0.00049 0.036 14.9 5.4 1 23 1008 1030 1008 1030 0.99

10 18 0.17 12 7.0 3.1 1 23 1115 1137 1115 1137 0.99

11 18 3.8 2.8e+02 2.7 1.2 1 19 1193 1211 1193 1215 0.91

12 18 2.2 1.6e+02 3.5 0.1 2 23 1222 1243 1221 1243 0.95

13 18 0.074 5.5 8.1 0.6 1 23 1309 1331 1309 1331 0.92

14 18 0.0053 0.39 11.7 1.3 1 23 1337 1359 1337 1359 0.96

15 18 0.0067 0.5 11.4 2.6 1 23 1449 1471 1449 1471 0.97

16 18 4.9e-05 0.0037 18.1 1.2 1 23 1477 1499 1477 1499 0.99

17 18 4.4 3.2e+02 2.5 2.4 2 23 1593 1614 1592 1614 0.86

18 18 0.0028 0.21 12.5 3.7 1 23 1625 1647 1625 1647 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0029	0.21	12.5	1.2	1	23	198	221	198	221	0.97
2	18	8.5	6.3e+02	1.6	5.5	1	23	303	325	303	325	0.97
3	18	0.0029	0.21	12.5	1.0	2	23	331	352	330	352	0.97
4	18	0.29	21	6.2	3.2	2	21	621	640	620	641	0.94
5	18	0.21	16	6.6	0.6	2	23	789	810	788	810	0.96
6	18	0.052	3.9	8.6	0.4	2	23	891	912	890	912	0.96
7	18	0.096	7.1	7.7	1.4	1	23	920	942	920	942	0.97
8	18	0.12	8.7	7.4	3.4	1	23	978	1000	978	1000	0.95
9	18	0.00049	0.036	14.9	5.4	1	23	1008	1030	1008	1030	0.99
10	18	0.17	12	7.0	3.1	1	23	1115	1137	1115	1137	0.99
11	18	3.8	2.8e+02	2.7	1.2	1	19	1193	1211	1193	1215	0.91
12	18	2.2	1.6e+02	3.5	0.1	2	23	1222	1243	1221	1243	0.95
13	18	0.074	5.5	8.1	0.6	1	23	1309	1331	1309	1331	0.92
14	18	0.0053	0.39	11.7	1.3	1	23	1337	1359	1337	1359	0.96
15	18	0.0067	0.5	11.4	2.6	1	23	1449	1471	1449	1471	0.97
16	18	4.9e-05	0.0037	18.1	1.2	1	23	1477	1499	1477	1499	0.99
17	18	4.4	3.2e+02	2.5	2.4	2	23	1593	1614	1592	1614	0.86
18	18	0.0028	0.21	12.5	3.7	1	23	1625	1647	1625	1647	0.98

Sequence Information

Coding Sequence: ATGTACCACGGCGGAGGTCGCCTGCTGCGTCAGCCTCGGTGCCGTAGGAGAAAAACATGGGATCATGTCGGACCCTCCGCACCCGCCCCGCGCCCACGCGCCCTCGgcccgccgccgcgccggcCGCCGCCGCCGGCCGCCGCCACGGGCGCTGGTCGGTCGCGGGTCGCTTCCTCGCCGGCGACTGCGGAGTGCGGAGTCGCCCTCATTCAGTCGGCGACGCTCGCGCTCCGCACACGGCGCTCGCAGCAGGCCGCCCCGCCGCCGCCCCCCGCCCCCCGCTGCCCGCCGGCGACCCCTGTCTCGGCACGTTTAACCGACACCGAGCGTTTTTTGTTGCAGCGGAGTATGCTACAACAGATGTCCTCGCCGCACCGCGCGCAGCTCGGCGAGGTCGCGACTCTCGCGCGCGCGCCTCTCTCGTGCGGCGACGCATCTCCGGAGGCCTCCTTGCTCGCGGCGGAGGACTTTGAATTACCGCAGTGTAAAATAAAGAGGAACTACAACTGCGCCTACTGCAACTTTTATACGCAGAACCCACGCATTTACCTTGTGCACACACGTGACGTGCACTTTGAGCGATTGAAAATTTACGATTGTCCGTATTGCGTTTACGCTTCTCGGCATCTTCAAAAACTAACGAGACATATAAAAATGGTACATGACATTACATTAGAAAAAGATATTAAAGAATCATTACATATACCGTCCACTTCCAACACTGTGGAACAACCGTCAGAAAAGATGGAGGAATTACTCGAGGAAGTAGAAGAGTTTGACGACGACGTTCAGATGGACGAAGAAGATGGTAATGAGGAGACTACAGAGGAGCGAACAGTCGACGGTGGCCATCTAAACTCCACGGAAGCCGCATCCACAGAGATGCTGtcagaaaaaaacaattttttttcgtgtAGTAAATGCAGTTATACAACTCATATTAGAGGAAgatttacaaaacatattaaatatcattcaaTGCCCATGATAAAGTGCACTTTGTGTGACTTCAAAACACCGTATAAATGGAACCTAGACCGTCATATGAAAAACCACGGAGGTAATGGAACCTTCCACTGTTATATGTGTAACTTCACAGCAGATATTAGACAAAGTTTGACGGTACACGAAATGAATCATCACCCGCCTCCTGTTGGTCAATCGAGTTTAAGCCGGCGTCGGAACCGGGTGGGCGCCAGCGACGTAACGGCTGGCGTTGATATGACGGATAACAACGCGCTCATTTCGAAAGAGGAGGAAGGGAGCGGAGATTCACGATCCTCACACTCTGCATCGGAAATGGGTCTACAATACATGGAAAAGGAAACTATTAGTTGCAACAGTGACTCTAACGACGCTTCCACTTCTGACTTTGGTAGAAAAGAGAATATGCAAATAACAAATGAAACAGATGTCAATTTCTTATCAGAAGACGTTAAGAACCAGAAGCAAAGTAGAAAAATTCCACGGCCTATCCCACAATTAATACCTTTAAACGCTTCAACGCCAAATCAAAGTAAAACTAGTGGTGAACCTCCTTCTAAGAAACTTAAAGAGTCTGCACAGTCACCTGAAGTGAATAATGCTCAAAAAAATGATAATCTTCCTATAGATATCAGTCTCACTCCAGTTAGTAATAACAATTCAAAAGACACATGTGTTCGTAAAAAGAACGAATCCTTCTTTGATAGGCTCAAAGAACGATTATTAACAGAAACAGGAGAAGAAGGATcactaatttgtaaaaattgtgGATTCGAGAGTAAATGCTTATCTGAACATTCAGTTCATGAAAAGAATTGTACATCGTTTGCAAATCGTCAATTAACAAACTCGTTACATTCCAGTTTAGGATCGACACGGTGTCAAAACTGTCGACATAGGTGTAAATCAAGTGCcgatttgtatatacatatgcaaTCTTGCAAAAAGAAAGATGTAATACAAGAAATAACGTCTGAAGTACATAACCAAGACAGCAGCGAGGCTGTCGCTATCAGTTGTGAAAAAGAAGTAGAGCCCCATCCTATGGAAAACGTTGTTTTTGTATGGAATAACATAAGTCACGatacaaataaatttgataCACCTTTAGACATTAGCATCAACGATGATTCTACGCTACCAGAACAACATAGAAATTTCGATTCTGAAATAGTTGATGATAATGATGGTGAAACCATGAATTTGTCTCCTAGTCAAGCGGTtgATACTGCGTTAGATGATGAGATGTTTAATGATTTAAACGAAAGTGTGAATCAGCCCTTCGAAATGCCTCTAAACTTGCAAACACAGAgtctagaaaataaatttgaatatgacGATAGAATATTTGATGcaaaaaaaccaaaaaggaCGTTGTGGAAGTGTAAGAAATGCAATTACAAagATTCATCCAAAGAGGCACTGTTGGAACATGTCCGTGAGCATTCTAAGCCAGATGATGGAGAGGAAATAAGGGTtccaaataatattaacaaaaagcCAGATAACATGCCAGATCCAGCTGATTTGGCGTATAGATGCGGACACTGCAACCAGCTGTCCAACTGGAAACATGTTATACAGAGACATTGTCGCCTGAAGCATGATGGAGTGATTAAGGTGATAACAACAGTTAAGCCAAAACCTGAGTCTTCTTCTTTATCAGCAAATGAAATTAACAGTGACACTTGCACGAAATGTCCATTTAAAGCAACAGACAAAAACATGCTTTTGGCACACTTACAACAACATCAACCATCCCCACAGTCAATATTCAAATGCTATTTCTGCCCTTTCTTTGTAAAGGATGAACATGAACTCATTCAGCATCTTATTTTGCACGGTATTACTGATCCCGAGGATTACATATCAAAGGCTATGGGGTGCAAATCTCCTTTACCAGAACAGGCACATCAAAATCCATTAAATCCTTCGTCAACTAAACGTCATCGATGCACCGAATGTCCATATGAGACGAATAGTAAGTCTCAGTTTATGTATCACGAACAATTTCATCGTCTCCCTGCTGACACTCCATATAAATGTCAAGAATGTAATTACAGTGTATCGAAGAGGCATTTGCTTCACCAGCATATGCGTGTTCACGGAATATTTGCAAAGAAGAACGATATGGAAACTGACTTCGAAAGTACACCATGTAATTCTAATCAAATAGATCCGCAAAGTGATTTTTCCATAAACCTTGACGAAATTCCGTTTGTATGGGTATCGGCGAAAAATGAATTTCACAAAATGTATAAGTGTCGATATTGTTCATATGTAAAttcccaaaaatgtaaaattccaAACCACGAAAAAATACATTGTGTAGTGTTTGAAAATAGtgacattacaatatataaatgtctTGAATGTAAATTTACTTGTGATAATAGGGGAAGATTAGCTGAACACTCCAAAACTCACGGAGAAATATACGGACGTATTTACTGTCCAGTAGAGTGTGATATTCCAGACGAGGAGCAGATAGCTAAGCTACGTAAAGTAATTGATCAAGATAAATTAAATGCTACGGATGAATTATTAAAAGATgaagaaaatcaaaatgaaattaaagaaaCCAAAACTTTATATTTCTGTCAAAAATGTCCGGCAAGATTTTTTGCTGACAGCGAACTAAAAGTTCACGACAAGTTTCATGATTTAACATTCCAGAATAAATGTAAGAGCTGTGAATTTTCGGTGCCCCAGGAGAATGAATTAGTTGCTCATAACTCTGTACATACCGACGAATATAACACCaaaacaaaaatgcttaaatttgtacataaaatacatGCTTTATATAAAGATCCAAAATTACAATTTGTTCACTGTCCGTTGACATCGGACGTGACTTGGGTCGTCTCTAACCCAggtaaaaattatgattatggCGATTTAATAAGGAGATCAGAAACAAAACACACCCCTAAACAGTATTATTGCAAAGAATGTCCAgctaaattttttaaaacttctgCTTTGAGCTATCATGTGGGGTTACACGGCAGTGATGGTGACCATAAATGTAAGAAGTGTAGTTATGCTGTCAAAAACCTCGGAAATCTAGCTAAACACGAGCTCTTACATGAAAATGAACCTAAAGCTTCCAGCTGCGATTACGAATCGGGAGaagatatagattataaaaatattccctTATCGGGCACTGATTTGTTTCAAAGGAAGACTGAAGCCCAGAAAAGAGTTTTAACGGACAAAGATAAACTCGTGAAACCTAATGATCACTTTCCCCCAGTACTACAAGCCGATCCACAATTTGGTTATTTGATGCATGGAAATCCAGAATTTATATACCCTACATACCTTAAAAATGGCCGGCAAAAAGAAAAACGTTATAAATGTCACAAATGCCCATCTGCATTTGAAAAGAGagaacaatataaaattcatttatctCTACATGGATCAAAACAAAGATACAAATGTGAAATTTGTGACTACTCTGTTAAATATTATGCAAATTATGTACAGCATATGAGAAAACACCAAATGAACGATGAAGCGCAAGCCGAAAGGAAGAAAGGTATTAACGGTTTCATAGAAAACGAATCCGAAAGCACAGCAAATAAAGGCAATGATAGCggagataatattaaattagcaaTCAAAACTATGCCTAAAAGACCGGTGCGGAGCGATTTTCAACAATTTTCTGTGAGTGATCAGCAAACTCTTAGGTTACTGCAGCGTCGTCGCTCaatgaataaaaattcaaaagaagGTAACATGTCCGAACTTTCTCCTGCCAAAGACCGAAAAATGCATACGTGCATTTTTTGTCCCTACACTAATCAACGTCAAGATGCCCTGAATAACCACTACAGGCGACATGATGATTCATATGTATTAACCAGTGGTAATCATAAATGTTCGTACTGTGATTTAGTAGTTGTACAATCACATTTCCTTCGAGAAcatttaaaaacacattttagtTATCAGAAAAATCTAAGCCCTGAATGTTTCGTGGCCAACGAAAATGTTACTTTTACGATCACCAAGTTAGATGTTAGTGAATCAACTCGAGATTTCAAATTAGATATGTTAAACCAAAGTAAACTgagcaatgaaaataaaacatttgttaaaattaaaacaggGGAACTGTTTGTCGAATag
Protein Sequence: MYHGGGRLLRQPRCRRRKTWDHVGPSAPAPRPRALGPPPRRPPPPAAATGAGRSRVASSPATAECGVALIQSATLALRTRRSQQAAPPPPPAPRCPPATPVSARLTDTERFLLQRSMLQQMSSPHRAQLGEVATLARAPLSCGDASPEASLLAAEDFELPQCKIKRNYNCAYCNFYTQNPRIYLVHTRDVHFERLKIYDCPYCVYASRHLQKLTRHIKMVHDITLEKDIKESLHIPSTSNTVEQPSEKMEELLEEVEEFDDDVQMDEEDGNEETTEERTVDGGHLNSTEAASTEMLSEKNNFFSCSKCSYTTHIRGRFTKHIKYHSMPMIKCTLCDFKTPYKWNLDRHMKNHGGNGTFHCYMCNFTADIRQSLTVHEMNHHPPPVGQSSLSRRRNRVGASDVTAGVDMTDNNALISKEEEGSGDSRSSHSASEMGLQYMEKETISCNSDSNDASTSDFGRKENMQITNETDVNFLSEDVKNQKQSRKIPRPIPQLIPLNASTPNQSKTSGEPPSKKLKESAQSPEVNNAQKNDNLPIDISLTPVSNNNSKDTCVRKKNESFFDRLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCTSFANRQLTNSLHSSLGSTRCQNCRHRCKSSADLYIHMQSCKKKDVIQEITSEVHNQDSSEAVAISCEKEVEPHPMENVVFVWNNISHDTNKFDTPLDISINDDSTLPEQHRNFDSEIVDDNDGETMNLSPSQAVDTALDDEMFNDLNESVNQPFEMPLNLQTQSLENKFEYDDRIFDAKKPKRTLWKCKKCNYKDSSKEALLEHVREHSKPDDGEEIRVPNNINKKPDNMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPESSSLSANEINSDTCTKCPFKATDKNMLLAHLQQHQPSPQSIFKCYFCPFFVKDEHELIQHLILHGITDPEDYISKAMGCKSPLPEQAHQNPLNPSSTKRHRCTECPYETNSKSQFMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIFAKKNDMETDFESTPCNSNQIDPQSDFSINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCVVFENSDITIYKCLECKFTCDNRGRLAEHSKTHGEIYGRIYCPVECDIPDEEQIAKLRKVIDQDKLNATDELLKDEENQNEIKETKTLYFCQKCPARFFADSELKVHDKFHDLTFQNKCKSCEFSVPQENELVAHNSVHTDEYNTKTKMLKFVHKIHALYKDPKLQFVHCPLTSDVTWVVSNPGKNYDYGDLIRRSETKHTPKQYYCKECPAKFFKTSALSYHVGLHGSDGDHKCKKCSYAVKNLGNLAKHELLHENEPKASSCDYESGEDIDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEICDYSVKYYANYVQHMRKHQMNDEAQAERKKGINGFIENESESTANKGNDSGDNIKLAIKTMPKRPVRSDFQQFSVSDQQTLRLLQRRRSMNKNSKEGNMSELSPAKDRKMHTCIFCPYTNQRQDALNNHYRRHDDSYVLTSGNHKCSYCDLVVVQSHFLREHLKTHFSYQKNLSPECFVANENVTFTITKLDVSESTRDFKLDMLNQSKLSNENKTFVKIKTGELFVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00776384;
90% Identity: iTF_00775696;
80% Identity: -