Basic Information

Insect: Heliconius sara
Gene Symbol: -
Assembly: GCA_917862395.2
Location: OU860794.2:2719198-2724686[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.02 1.5 9.9 0.4 1 23 350 372 350 372 0.93

2 4 5e-05 0.0037 18.1 1.6 1 23 378 400 378 400 0.97

3 4 0.00012 0.0088 16.9 1.4 1 23 406 428 406 428 0.96

4 4 5e-07 3.7e-05 24.3 5.4 1 23 434 456 434 456 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.02	1.5	9.9	0.4	1	23	350	372	350	372	0.93
2	4	5e-05	0.0037	18.1	1.6	1	23	378	400	378	400	0.97
3	4	0.00012	0.0088	16.9	1.4	1	23	406	428	406	428	0.96
4	4	5e-07	3.7e-05	24.3	5.4	1	23	434	456	434	456	0.97

Sequence Information

Coding Sequence: ATGAACTTCGCGCCGTTCACGGGGCACATCCCTTCGGGGACTGGCCTGCCGACCATCCACCAGTTCGCGGCCAAGTTCGGATACGAGGGCGCCAACGCCGGCGTGGTGCAGGAGACGCGCTACCAGGCATCGGGCAGTGGCGTGCAGTTTGCGGTGGCGCCGGCCGCCGGTCTCACCGTcgacggcgttaagttccggcaGGCTGAAAGCGTGGTGGTGGTCAGCAACGCGCAGCCCGGTACCGTCACCTTGGCGGGAATCGCGCCCATTCATTCCGTAAACACAGGTGTAAAATATCAAAGTATTACCGCTACATCATCAACCGTGAACGTAGGTAACGTGGCGTACGGCGGGGGAGGGGGAGGGGGAGCGGGCGCGGGCGGAGGAGGTCAGATAGGCTACCTCCAGGAGACCGTGTTAAAGGGCGAGCGCGATAAGCGGGAGTACCGAGAGGACTTGCACCACGACCTCATGGCGTCTATGATGCAGCAACACCAAGtgaccCAAGCTCCTCTACAACAAGGCACTCAGCAGCTTCTTGTGGTTCTACACGAGCCTAAAGAAGGAGCGGCCCTGGCGAGAGCCATTAAGCAGGAGGGTCGGATGCCACGAGAAATAACAAATGCTCCGGCTGAGTTTATAAGTATAGGCGACGTCACAGACACTTCTACATGGCAAAGCCTCAGTGGGGGAGTGGCTGACTACCTGTCAGCTTTACCACTGCCTCTGCATCATCTCCTGAAATACTCCACATCCAACACCGGCGACGGCAAGCGAGACGAACCCACCATTGTCACTGTGGCCACTAACTCTCTGCCGCCTATGTCTACGTTGACATcgGTACCAACTAACGTAGTAAACAGCGTCGTGGTACAAACGGCCACCATAGTGAACCCCGCGAACAACAACATAGTCAATACAAACACTAACATCAACACGATCTCAATcagtaagaaaaagaaaaagaagaaagctTTGAAAGAGAAAAAACCAAGACCTAAACCTGGGGAAATACGATTAACAACTGCTTTAGATGGCAGCACCCTCTACTGCTGTCCAGAATGTCACATGGCGTATCCAGAACGAGGTCTCTTAGACCAACATCTTGTTGGACACACTCTGGAGAGAagGTTCATCTGCGACATCTGCAACGCGGCGCTGAAGCGCAAAGACCACCTCACGCGCCACAAGCAGTCGCACAACCCCGAGCGGCCGCACGTGTGCTCCGTCTGCCTCAAGGCCTTTAAGCGCAAGGAGCAGCTCACTTTGCACTTCATTATACATTCCGGTGAAAAGAGACACGTCTGCAACGAATGTGGGAAAGgaTTCTATCGCAAAGATCACTTGCGCAAGCACACGCGCTCTCATATCGCGCGACGAGTGAAGGCAGAATTATCACAACAGTCAACAACACCGCCCCTATCGCAGACTGCCCCGGCGCCGCCGCTGGAGCCCTCCTGA
Protein Sequence: MNFAPFTGHIPSGTGLPTIHQFAAKFGYEGANAGVVQETRYQASGSGVQFAVAPAAGLTVDGVKFRQAESVVVVSNAQPGTVTLAGIAPIHSVNTGVKYQSITATSSTVNVGNVAYGGGGGGGAGAGGGGQIGYLQETVLKGERDKREYREDLHHDLMASMMQQHQVTQAPLQQGTQQLLVVLHEPKEGAALARAIKQEGRMPREITNAPAEFISIGDVTDTSTWQSLSGGVADYLSALPLPLHHLLKYSTSNTGDGKRDEPTIVTVATNSLPPMSTLTSVPTNVVNSVVVQTATIVNPANNNIVNTNTNINTISISKKKKKKKALKEKKPRPKPGEIRLTTALDGSTLYCCPECHMAYPERGLLDQHLVGHTLERRFICDICNAALKRKDHLTRHKQSHNPERPHVCSVCLKAFKRKEQLTLHFIIHSGEKRHVCNECGKGFYRKDHLRKHTRSHIARRVKAELSQQSTTPPLSQTAPAPPLEPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00825156;
90% Identity: iTF_00781390;
80% Identity: -