Basic Information

Insect: Heliconius sara
Gene Symbol: -
Assembly: GCA_917862395.2
Location: OU860791.1:17537903-17547198[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.1 2.3e+02 2.9 0.2 3 23 115 135 113 135 0.94

2 18 0.42 31 5.7 0.2 2 23 139 161 138 161 0.91

3 18 0.24 18 6.5 0.3 3 23 435 456 433 456 0.96

4 18 0.29 21 6.2 0.2 1 20 464 483 464 484 0.95

5 18 0.031 2.3 9.3 0.3 2 23 495 516 494 516 0.93

6 18 2.6 2e+02 3.2 2.9 1 23 532 555 532 555 0.94

7 18 0.0069 0.51 11.3 1.6 1 23 564 587 564 587 0.94

8 18 3.8 2.8e+02 2.7 2.0 3 23 663 684 661 684 0.88

9 18 2.7 2e+02 3.2 2.6 1 23 689 712 689 712 0.92

10 18 4.9e-05 0.0036 18.1 1.2 1 23 718 740 718 740 0.97

11 18 8e-05 0.006 17.4 1.2 1 23 747 769 747 769 0.98

12 18 8.9e-05 0.0066 17.3 2.3 1 23 774 796 774 796 0.96

13 18 0.00067 0.05 14.5 1.8 1 23 802 824 802 824 0.99

14 18 1.8e-06 0.00014 22.6 1.4 1 23 830 852 830 852 0.98

15 18 8.6e-05 0.0063 17.3 1.5 3 23 860 880 859 880 0.98

16 18 0.00018 0.013 16.3 0.2 2 23 888 910 887 910 0.97

17 18 0.0011 0.084 13.8 0.2 1 23 915 937 915 937 0.98

18 18 0.13 9.9 7.3 4.1 1 23 943 966 943 966 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.1	2.3e+02	2.9	0.2	3	23	115	135	113	135	0.94
2	18	0.42	31	5.7	0.2	2	23	139	161	138	161	0.91
3	18	0.24	18	6.5	0.3	3	23	435	456	433	456	0.96
4	18	0.29	21	6.2	0.2	1	20	464	483	464	484	0.95
5	18	0.031	2.3	9.3	0.3	2	23	495	516	494	516	0.93
6	18	2.6	2e+02	3.2	2.9	1	23	532	555	532	555	0.94
7	18	0.0069	0.51	11.3	1.6	1	23	564	587	564	587	0.94
8	18	3.8	2.8e+02	2.7	2.0	3	23	663	684	661	684	0.88
9	18	2.7	2e+02	3.2	2.6	1	23	689	712	689	712	0.92
10	18	4.9e-05	0.0036	18.1	1.2	1	23	718	740	718	740	0.97
11	18	8e-05	0.006	17.4	1.2	1	23	747	769	747	769	0.98
12	18	8.9e-05	0.0066	17.3	2.3	1	23	774	796	774	796	0.96
13	18	0.00067	0.05	14.5	1.8	1	23	802	824	802	824	0.99
14	18	1.8e-06	0.00014	22.6	1.4	1	23	830	852	830	852	0.98
15	18	8.6e-05	0.0063	17.3	1.5	3	23	860	880	859	880	0.98
16	18	0.00018	0.013	16.3	0.2	2	23	888	910	887	910	0.97
17	18	0.0011	0.084	13.8	0.2	1	23	915	937	915	937	0.98
18	18	0.13	9.9	7.3	4.1	1	23	943	966	943	966	0.97

Sequence Information

Coding Sequence: ATGGTATCCGACGAGTCAGATGATGAACCTCTATCTAATTTGGCAGCCAAGAAAAAGTCCGGAGATTATGAATATGAGCCGCCAAGTAGTAGTGATGAagaacctaaaaaaaagaagaagaaaaaggaACCGCCGGCAAAAAAATTAGGAgtgacaataaaattaaatcgaaaattaAACTCCCTAGTCGGTCCCGCTGTAATAGAGAGACCGACCGATGTTTGGCTTTATTTGAAGGATCTGAATCCGACCGGACCTTATAGTTGTTTACTGTGTACAGATTGGTTTATAAATAGATCTAAAATGATTTTACATTATGCATTAAATCATAAGAAAGATTTTTGTGGTATTTGcagATATTTTGTACCAGACAGGAGTGCATGGTTCGAACATGAGAAGTTTCATTCACCGTGGCCCTGTTCACAATGTGTGGAAACCTTCTCTACTGATGTTCAGTTACGTTTTCATCTCAGCTCTATTCATAACTTAGTGCACTGTCGCCTTTGCCACTTTAGGGTGACAGCTGATGATGATTACAGTTCTCATTTATTCCAAAAACACAATGTTACCAATGCTGCTTGCCAAAACGATGAACAGTTTTGGCAAGTAGATTATGATGGAGATGATAAGTTTATGTGCTCACTATGTTCAAAGCCAGATTTACTGTGCTCAACTTTTTTTGCACATTATATGGGCTTCCATCATTTCACACTGAAATGTTTAACGCACCTTATAGCTGGGAAAAATACATCATTCTTAGTGGAAGGTGCTGATGTTACTGATCGTTTTGTCAATGAACAGCTAAAAGGTCATGTAAGGCTGGGCTATGTAGACTTGACACCAAAGACTGACACaccaaaaattgtaaaagaaaatgttttaccAATTGAAATTGTTTTGCCTGAAGTCAAACAAGAAATTGTAAGTGACCATGAAGAGCAGAATAATGTGCCACCTTTGACACCTGCACTTCCACTTGCACCTACACCTACACCTGCACCTACACTTCCACCCACACCTGCACCAGTTATCATGCCTAGCGATGACAATGTACCAAAAGATGACACTATACCTAAAGATGAAAACATGGCTAAAGATGAGAACAGCCAAAGCAGTGATACTGTATTAGACTATAAAGGAAGTGAAGACTATGATGTGACAGTCACAGAAATGATTGTTATAGAAAGATCTTACTATGATTATGTGAACCAATTGCTAGCTAGTGTAGGCGAAGATGTAGTACCACAGCTTTCTCACATTGACTACGACAAACTTAAATCAGATATGTTAAACAATGTCATATGCCCCTTATGTACAACTAAATTGGAAACAGTACAATCATTTTCCACACATATGAATAAAGTTCATAGTGTGAAAACAGTGCCTTTATATTCCTGTAGAGTTTGTGCGACATTTTTTGACACATACAACGAACTGGCAAATCATACAGCGTGTGAATTtgctgattttgatgatttatgGATATGTCAATTTTGTGACAAAGAATTTGATAATCGTGAAGCAACGAGAGAGCATTTAACTGAACACTGGACTTATTTAGACTACGAGAACTGTTTTAGCCCCCACCTTGGattcaaatgtaaatattgttccACATTGTTCTGGAATGAGCATGATAGGGAAACTCATCAGTTGAGGGTTCACTTCcataaatataaagaacatttttataaatgtgacaCTTGCGCTAAAACTTTTGGTGATAAGGTATGGTATATACAtcattatttagaaaaacactGTGAGGATGAAGACAAAGCATTCCTCGTAAAATGTTGTCTTTGCTGTAGTGTTCTCGAAAGTGTAGAAGAAATGAGAAGTCATTTTGCATCAAATCATGCTGAAGTGCGGAAGCTGTACTGTTCCCTTGAACCTTGTATGTACAAACCGCTGAGTCATAGGAAGTCCTTTAAGTTACATGTTAAGATGGTCCACGGTGCACCAAAACCTGAGAAAGTTGTCCATTGCAACGTCTGCCAGCGTGAGTTCCAAAGTGCGCGCGCGTGCTCCACCCACATGGCTCAGATACACGGCCCCGGCAAGTTTAAGTGTAAACTTTGTAAGGAAGTGCTGCAGACACTCGATGAAAGAAAACTGCACTACCTCCTCTGTCATCCGGGGCGACATCCGTTTGAGTGTGTTGATTGCGGCAAGTCGTTCCAGTATAAGTCCTCCCTATATATGCACAGACAGGACCACCAGCCCAACAAACAGACATACACTTGCAGTTATTGTGCGAAGACGTTTGcgAAGAAGGACTCGTACCGCGAGCACGTGCAGATCCACGAGGGGCCGCGCCACGCGTGCTCGTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGGCGCCACACGGGCGAGCGGCCCTACCGCTGCGCGCACTGCCCGCGCGCCTTCGCCGACAAGGGCGCCTGCACCGCGCACACCAGAACACACTCTAAGGACAGGAGCTACGCCTGTCTGTACTGTGGACAGACATTTGTACAGAAGTCGAAGCTAACATATCATATTAGAAAACATACTGGAGAAAATCTAGAAGCTTGTCCAGTTTGCTCCAAGCTGTTCACAAGTGCGTGTTCCCTGCGCGAGCACATGAAGACACATCTGACGAAGCGACAAATAGTCAAATGTCCGTTGTGCGACAAGGGCTACGCGGACGAGCGCTACATGCTGCGCCACCTGCGCACGTCGCACACGCGCTCGCAGTTCAGCTGCCCCATATGCACCAAGCTGCTCACCAGCGCCGCCGGCCTGCGCCACCACGTCATCACGCATAGCCCCTTGAACACGTTCAGGTGCAAGTGCTGTCCAAAATCCTACGCAGTGAAACGTACGATCATTAAACATCTGCGTAAACGTCACGGCCTCAAAGGAGGGGATTTGAACCTGAAGGACTTTTACACGCGCCTAGAGCCAAGAGAGTGTCAACTCAAGTTAGACGAAACGACAATGACCACTATATTCGGACCCCCGAAGAAACCAGCGCCAGAAGTGCTGATCGCTGACTTTGTGACATTCTCCAAAAAAATCTCCTTCGCGCAGAACATAGAGAATAATAATACTGACGACACAGAGGAAGATAACGACGCTAACGATGGCAAAGACAGTGATAATGATCATGAAGGTGGTAGCAACAGTGAAACGGAAGAACGAATGCCGCGTATTAAACAGGAAGTGGTCAGTGGTGACGAGCTGGAGCCCACTGACTTTGTAAGCGTCAAAATTGAGCCCATGGAGGACGATAATGTTGATTAG
Protein Sequence: MVSDESDDEPLSNLAAKKKSGDYEYEPPSSSDEEPKKKKKKKEPPAKKLGVTIKLNRKLNSLVGPAVIERPTDVWLYLKDLNPTGPYSCLLCTDWFINRSKMILHYALNHKKDFCGICRYFVPDRSAWFEHEKFHSPWPCSQCVETFSTDVQLRFHLSSIHNLVHCRLCHFRVTADDDYSSHLFQKHNVTNAACQNDEQFWQVDYDGDDKFMCSLCSKPDLLCSTFFAHYMGFHHFTLKCLTHLIAGKNTSFLVEGADVTDRFVNEQLKGHVRLGYVDLTPKTDTPKIVKENVLPIEIVLPEVKQEIVSDHEEQNNVPPLTPALPLAPTPTPAPTLPPTPAPVIMPSDDNVPKDDTIPKDENMAKDENSQSSDTVLDYKGSEDYDVTVTEMIVIERSYYDYVNQLLASVGEDVVPQLSHIDYDKLKSDMLNNVICPLCTTKLETVQSFSTHMNKVHSVKTVPLYSCRVCATFFDTYNELANHTACEFADFDDLWICQFCDKEFDNREATREHLTEHWTYLDYENCFSPHLGFKCKYCSTLFWNEHDRETHQLRVHFHKYKEHFYKCDTCAKTFGDKVWYIHHYLEKHCEDEDKAFLVKCCLCCSVLESVEEMRSHFASNHAEVRKLYCSLEPCMYKPLSHRKSFKLHVKMVHGAPKPEKVVHCNVCQREFQSARACSTHMAQIHGPGKFKCKLCKEVLQTLDERKLHYLLCHPGRHPFECVDCGKSFQYKSSLYMHRQDHQPNKQTYTCSYCAKTFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCAHCPRAFADKGACTAHTRTHSKDRSYACLYCGQTFVQKSKLTYHIRKHTGENLEACPVCSKLFTSACSLREHMKTHLTKRQIVKCPLCDKGYADERYMLRHLRTSHTRSQFSCPICTKLLTSAAGLRHHVITHSPLNTFRCKCCPKSYAVKRTIIKHLRKRHGLKGGDLNLKDFYTRLEPRECQLKLDETTMTTIFGPPKKPAPEVLIADFVTFSKKISFAQNIENNNTDDTEEDNDANDGKDSDNDHEGGSNSETEERMPRIKQEVVSGDELEPTDFVSVKIEPMEDDNVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00777535;
90% Identity: iTF_00779027;
80% Identity: -