Basic Information

Insect: Heliconius sara
Gene Symbol: -
Assembly: GCA_917862395.2
Location: OU860785.2:18009181-18016786[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00046 0.034 15.0 4.2 1 23 14 36 14 36 0.99

2 11 1.3e-05 0.00097 19.9 0.8 1 23 43 66 43 66 0.93

3 11 6.6e-05 0.0049 17.7 1.3 2 23 75 97 74 97 0.95

4 11 0.0072 0.54 11.3 0.5 2 23 104 125 103 125 0.96

5 11 0.00065 0.048 14.6 7.0 1 23 131 155 131 155 0.95

6 11 1.3e-05 0.001 19.8 0.5 2 23 162 183 161 183 0.96

7 11 0.00023 0.017 16.0 1.2 3 23 192 213 190 213 0.96

8 11 0.00087 0.064 14.1 0.2 1 23 219 242 219 242 0.97

9 11 0.015 1.1 10.2 2.3 2 20 249 267 249 271 0.94

10 11 2.9 2.1e+02 3.1 3.9 1 20 535 554 535 557 0.90

11 11 0.031 2.3 9.3 0.5 2 23 568 588 567 588 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00046	0.034	15.0	4.2	1	23	14	36	14	36	0.99
2	11	1.3e-05	0.00097	19.9	0.8	1	23	43	66	43	66	0.93
3	11	6.6e-05	0.0049	17.7	1.3	2	23	75	97	74	97	0.95
4	11	0.0072	0.54	11.3	0.5	2	23	104	125	103	125	0.96
5	11	0.00065	0.048	14.6	7.0	1	23	131	155	131	155	0.95
6	11	1.3e-05	0.001	19.8	0.5	2	23	162	183	161	183	0.96
7	11	0.00023	0.017	16.0	1.2	3	23	192	213	190	213	0.96
8	11	0.00087	0.064	14.1	0.2	1	23	219	242	219	242	0.97
9	11	0.015	1.1	10.2	2.3	2	20	249	267	249	271	0.94
10	11	2.9	2.1e+02	3.1	3.9	1	20	535	554	535	557	0.90
11	11	0.031	2.3	9.3	0.5	2	23	568	588	567	588	0.90

Sequence Information

Coding Sequence: ATGTATAAATGGCAATTATGTATAAATGATGCAAAACCTTTTAAGTGCGAATTCTGCGCCTACGCATGTCGAGACTCCTCCACACTGAGGAAACATCAGCAAAGGCATATGGGTATTATCAAACGATATCAATGTACATTATGTGATAAAAGTTATAGTACTAAAAGTCGACTTACAGTCCACGTAACTGAAGtacatttagaaataaatgtGAACAAATGGAAATGCGATAAATGCAATAAGGTCTTCAAATCCAGTAAAGTGTTAAAATCACATGTGaaaaacgTGCACGAACGAGCATACGCGTGTAAATGTGAAATTTGCGGCGctattataactaataaatacaatttgccGTTACATATGTCGAGACATGTGAACTTAAGACCCtacatatgtaattttaacCACTGCGACAAGAGGTTTAAGGATAAAtgttctttaaaaaaacatatattcctACATTATCCTGAAAAACATTTAGAATGTgagatttgtaataaaaaatttgcaAGGCCGAGTCGTCTAAAATTACATCTAAATCAACATAAGGCGAAGAAAAAATGCGTTTTTTGCGATTATTGTGAGACTagtttctataataaaaattacctatTAACACACATTAATAAGAAACATttgcataaaataaagtttatatgcGACAAGTGTGGGTTCGAAACCAGCAATAAGCCGAGTTTAGTGATGCATATTAAATCAGGACATGAATCAGAATCGgacagaaaatgtaaaatttgcaataaaatatataaaaaacatatatatttaaaggctCATTATTGGAAAACGCATTGTGTTAGATACAATATGACTATAAGGAAAACaaaaccGAAAAGACAGGGAGTAATTATAAAAGAGGAACCAATTGAATATATTGAAGAAGAATTTTTGAATGAAGTTAAAGTCGAAGTGATGAGTGATACAGAAGAAAAAACAACagattggaaaaaaaatcttaataaatatttcacagaACAAATTGTTAAACCGGGATCGTCTAGTAATAAAGaaaaaaaagataacaacaTAAAAGTGGATGTTAAATGTCAGAAAGAAgcgaaaatatgtttaaaaaagttGTTAGAACAGAAAAGAAGGAAAAGACAAATGAAGGAATTAGAGAAGATAAGAAGAGAGTATAATAGAAGATTGAAGGAGTTGAGTAAAAGTAAAGtcaaaacaaaaataaggtTTGTTAGAAACAATGATAATGATAAGATTGAATCAAATGATAATGTAGTGCACTCTAATGAtgaaataacaaatatcaataaTGATGAAAGTAATAAAACTGATGATAATGTGATCgaaaaagaagatataaattatgagaataatgaaaacataagtaataaaattgaaagtaatgACAATAGTTTTAATGATGTAACTGAAAAAACTCATCAAAATATCGACAGTGAAAAACATAATGAAAAagttaatgataaaaatataaaaaacgactctaatgaaaataatgatgttctagataattttttaaataaaaatgaacataacaatgaaataagttataatattaaaggaaCTATTAGACAAGatagcaaattaaaaataaattctcatCAATGCTATGTATGTTTTAAGCTCTACGAAACTAAAGAGAAACTAATAATACATTGTCAAGAACACTTCGACATATGCAATATAAGTGAACTAAAAAAATGTCCCCTTTGTAATTATGTCACTAAAGGCGATTTAAAACGACATATGTTATCTGTGCacagaattaatttaaaaacatggcTTAAGTTAAAGAAAAACAGCACAATGTTTGATAATACACatgataatattgatattaaaataattccaaGTGTAAAAAGCTTAAATAAACAAGCGTATGtcaaattagataaaatagaaaagaaaaaaaaagaaacagGAAAACACGACTTGAATCCAAGACCgttcaaaaagaaaatatggaaaCACAAGTTGGTTAGGGAAAATACAGAGAAACAGAGGGAAACAGGGGGAAATGAATATGGAAATGCAGAGAAACAGATAGACATAGGGAAAAATAGATATGAAAATCCAAAACCTATCAGAAATAAACACAAATGTGACAATGAATTGAAAGAGTTTTATAATAGCAATATAAAAGGTGGTGATATTAAATTTTgccattttttgaaaatttttaataaaatgtcacaGGAAAGTGTCAACGATATCCCGGAATTCATTGGAAAAAAAGAAATGGgaaaattggtaaaaatatGTCGTTTTAAAAGAACTACGAAAGTCATTAAACAGGATTTCAGTAGAAagatattaattagtaaaaaagaACATGAAAGAAGGAAATTAATGATAGAGAGATTGAGGCAGAAGAATTTGAATTCGTTTTAG
Protein Sequence: MYKWQLCINDAKPFKCEFCAYACRDSSTLRKHQQRHMGIIKRYQCTLCDKSYSTKSRLTVHVTEVHLEINVNKWKCDKCNKVFKSSKVLKSHVKNVHERAYACKCEICGAIITNKYNLPLHMSRHVNLRPYICNFNHCDKRFKDKCSLKKHIFLHYPEKHLECEICNKKFARPSRLKLHLNQHKAKKKCVFCDYCETSFYNKNYLLTHINKKHLHKIKFICDKCGFETSNKPSLVMHIKSGHESESDRKCKICNKIYKKHIYLKAHYWKTHCVRYNMTIRKTKPKRQGVIIKEEPIEYIEEEFLNEVKVEVMSDTEEKTTDWKKNLNKYFTEQIVKPGSSSNKEKKDNNIKVDVKCQKEAKICLKKLLEQKRRKRQMKELEKIRREYNRRLKELSKSKVKTKIRFVRNNDNDKIESNDNVVHSNDEITNINNDESNKTDDNVIEKEDINYENNENISNKIESNDNSFNDVTEKTHQNIDSEKHNEKVNDKNIKNDSNENNDVLDNFLNKNEHNNEISYNIKGTIRQDSKLKINSHQCYVCFKLYETKEKLIIHCQEHFDICNISELKKCPLCNYVTKGDLKRHMLSVHRINLKTWLKLKKNSTMFDNTHDNIDIKIIPSVKSLNKQAYVKLDKIEKKKKETGKHDLNPRPFKKKIWKHKLVRENTEKQRETGGNEYGNAEKQIDIGKNRYENPKPIRNKHKCDNELKEFYNSNIKGGDIKFCHFLKIFNKMSQESVNDIPEFIGKKEMGKLVKICRFKRTTKVIKQDFSRKILISKKEHERRKLMIERLRQKNLNSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -