Hsar006261.1
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- ZFY
- Assembly
- GCA_917862395.2
- Location
- OU860785.2:16153111-16160112[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00043 0.032 15.1 0.2 1 23 182 205 182 205 0.98 2 11 0.018 1.3 10.0 5.2 1 23 212 234 212 234 0.98 3 11 0.00024 0.018 15.9 0.3 1 23 238 261 238 261 0.97 4 11 2.7e-05 0.002 18.9 1.4 1 23 289 311 289 311 0.98 5 11 0.0033 0.24 12.3 1.1 6 22 326 342 322 346 0.88 6 11 0.043 3.2 8.8 2.0 1 23 385 407 385 407 0.95 7 11 0.0048 0.36 11.8 0.8 2 22 416 436 415 440 0.91 8 11 1.1e-06 7.8e-05 23.3 0.5 1 23 448 471 448 471 0.96 9 11 0.00026 0.019 15.8 2.8 1 23 477 499 477 499 0.97 10 11 0.00011 0.0078 17.0 2.2 3 23 508 529 506 529 0.92 11 11 0.64 47 5.1 5.9 1 23 534 557 534 557 0.95
Sequence Information
- Coding Sequence
- atggATTCTTTAACGGACAAATTATGTTGTGGCTGCCTTAATTATGGCCGTAAAATGGTTAATATAGAATACGAATGTGATATAAGGTGTTTTTCGCTAATTTTAAGTTTCATGTACaaacactatttattattatgctaTGAATGCGCTGCACTGCTCAATAAATTTTCTAAGTTTAAGCAACAAATTATTACCTCTTATAGGAGCTTTCACAATTATGAATTAGAGaattttaaatatattgaacctGAACCAAGACtgcatttaaaacaattatataatttatccaCATTAGATTCTTTTACAAATaatgatgaaacaaaaatagattttattaaaacagaattAGACGAATATATACCATTAGATGATAAAGAACTCTCTGATGATGAAccattagttaaaataaaaaacaaaaaaaggaagAATGGTGTTAAACTACAGCAAAAAGaattagaatatatagaagttgaattaaataaagaagataTTGAACAAGAAAGAAGGGTTCTATTGACAAAAGAAGATTATATAAATGCAATGTTTAGATGTGAGAAATGTATTATGTCTTTTCCTAATGCCGACGATTTGAATGATCATGTTAGAATGAAACATGaattaCATTCTTCGAAACATAAATGTGTAATATGTGAATGTTCATTTTCTACTGAAGTTTCATACAATTAtcatacaaataaacatattagaAGATATGAATGTACAGTGTGTTCAGAAAGGTTTGCCAACAAGAGGGCTgttatgaaacattataatattgtacattGTTTTGCgaCAGGTGTAAATTATGATTTTGATAAGAAAATAGAGAATGGTGATATTAATAATAGTGTCCAAGAGCAAATATTCCCGTGCGAGTTTTGCGGTAAAACTTTCAAATGGCGGACCTCGCTCAGGAAACATTTAGAAACGCATAGAATTGAAACTGGTGAAAAAAGAAAGCCATATTGTGCGCCGTGCAGATTATCGTTTACAACTACTTCTAATTTACAAAAACACGTCCGGACCAGTTCAAAACATCAAATACAGCTCAAATTAagAAAACTGACAGAAACCCTCCCAGATCTGACAACAACTGACAAACAGAAAGCCCACCTGGAAATACGATCGACTGTCAACAAATCTCGCCATCAGTTCGCGTGTACGCAATGCGATAAACGATTCCTTTGGCGAGGGAATTTGTTACGACACTTGCACAGCCATGCTGctaaAGCAAAAGGCGATTTAGTGTGCAAGCCCTGTAACAAAACTTTTTCCTCGATAGCAACATATCAACAACatatgaaaataagtaaaaaacatGTTTCCGAAAATGATTTTAAATTCATGTGCAGTGACTGTGGAAAACGGTTTCCTACAAAATCAAGGTTACGGGATCATATAAATTGGGAACATTTGAAGAATTTTGTGTACAGTTGTGATGAGTGCCATAAGgtatTCAAAACGTCGAACTCTGTGTATTTGCACAAGCAGGTGCACAGAAAAGATACTGTGCAACATTTGTGCGACCACTGTGGGAAACCATTTCCGAACCACGCTAAGCTCCGCAGCCACATACTAGGCGTCCACGGCGGCGCCGCCCACTCCTGCGCCATTTGCGGCGCGCGCTTCGCGTGGCATTCCTGCCTGTCCCGACATGTTAGACATAAGCATAAGAGAAATATACGCGTTCATACGTTCTAG
- Protein Sequence
- MDSLTDKLCCGCLNYGRKMVNIEYECDIRCFSLILSFMYKHYLLLCYECAALLNKFSKFKQQIITSYRSFHNYELENFKYIEPEPRLHLKQLYNLSTLDSFTNNDETKIDFIKTELDEYIPLDDKELSDDEPLVKIKNKKRKNGVKLQQKELEYIEVELNKEDIEQERRVLLTKEDYINAMFRCEKCIMSFPNADDLNDHVRMKHELHSSKHKCVICECSFSTEVSYNYHTNKHIRRYECTVCSERFANKRAVMKHYNIVHCFATGVNYDFDKKIENGDINNSVQEQIFPCEFCGKTFKWRTSLRKHLETHRIETGEKRKPYCAPCRLSFTTTSNLQKHVRTSSKHQIQLKLRKLTETLPDLTTTDKQKAHLEIRSTVNKSRHQFACTQCDKRFLWRGNLLRHLHSHAAKAKGDLVCKPCNKTFSSIATYQQHMKISKKHVSENDFKFMCSDCGKRFPTKSRLRDHINWEHLKNFVYSCDECHKVFKTSNSVYLHKQVHRKDTVQHLCDHCGKPFPNHAKLRSHILGVHGGAAHSCAICGARFAWHSCLSRHVRHKHKRNIRVHTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212862;
- 90% Identity
- iTF_00778946;
- 80% Identity
- -