Basic Information

Insect: Heliconius sara
Gene Symbol: pita
Assembly: GCA_917862395.2
Location: OU860790.2:6684049-6698397[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.33 24 6.0 0.4 3 23 198 219 196 219 0.90

2 10 0.00052 0.039 14.8 0.5 2 23 225 246 224 246 0.97

3 10 0.0019 0.14 13.1 1.0 1 23 252 275 252 275 0.95

4 10 0.088 6.5 7.8 0.1 3 23 283 303 281 303 0.96

5 10 1.5e-05 0.0011 19.7 1.6 1 23 310 333 310 333 0.96

6 10 2e-05 0.0015 19.3 1.4 1 23 339 361 339 361 0.98

7 10 8.6e-05 0.0063 17.3 6.8 1 23 367 390 367 390 0.97

8 10 0.0027 0.2 12.6 0.1 1 23 407 429 407 429 0.95

9 10 0.0024 0.18 12.8 0.0 2 23 435 456 434 456 0.97

10 10 0.00068 0.05 14.5 0.4 1 23 462 485 462 485 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.33	24	6.0	0.4	3	23	198	219	196	219	0.90
2	10	0.00052	0.039	14.8	0.5	2	23	225	246	224	246	0.97
3	10	0.0019	0.14	13.1	1.0	1	23	252	275	252	275	0.95
4	10	0.088	6.5	7.8	0.1	3	23	283	303	281	303	0.96
5	10	1.5e-05	0.0011	19.7	1.6	1	23	310	333	310	333	0.96
6	10	2e-05	0.0015	19.3	1.4	1	23	339	361	339	361	0.98
7	10	8.6e-05	0.0063	17.3	6.8	1	23	367	390	367	390	0.97
8	10	0.0027	0.2	12.6	0.1	1	23	407	429	407	429	0.95
9	10	0.0024	0.18	12.8	0.0	2	23	435	456	434	456	0.97
10	10	0.00068	0.05	14.5	0.4	1	23	462	485	462	485	0.97

Sequence Information

Coding Sequence: ATGGAGAAAAGGAAAGAGTCTTTAAACATAGTGAAAATGTGTCGCTTTTGTCTAACACAAAATGAAACACTGGAGAGCTTGTATGATAGGAACCGTTCAGGAAAGAATTCTCCAAATcttcatttgaaaattttatcgtGTGTTTCTATTGAGatatttcccTCTGACAAAATGCCCTCATTTATTTGTCAACGCTGTAAATTCTTCATGAATCTTTTCtatgaatataagaaaattgttcGCCAAGCTGATGAAACAATCTTACAGTATATTCAACATAACTCTCCAATGGAAATAATAACATGGCCCTCAATCTTTTCTAAAgtaTATCATAGAATGAATGAAATTGATATAGTCAAAACTCTAGAAGGTGCTACCGTGCAAGTTTCTTCTCATGATAACTCGGATAGTGATGAAGAAGATGGaaatgtttacaatataaaGattgaaGATGGTCCAGATGATGACACAAAAACTGcttgtgttaaaattattaccagtaaagagagcaaagaaatagagaATCCATTGGGTAAAGAACAACATGAGATAGATGTGGTCGAAAAAGGCTTAGAAGATGGCTGTTGGGCTTGTGACGAATGTGATTGTACGTATCCTCTACAACAGTTGTTGGAGCTCCATAAGGCACAGAAACACAGGGAGCGCACAGTGGAGTGCGATCAGTGTGATGCAAAATTCTTCACAAAATATGATCTATCAACTCATCTACTGCGTCATACTGATGAATTACCATTCCAATGTGTGGCTTGTAGTAAGAAATTCAAAAGACTCATATTGCTTAAGAGACATGAAAAACTCATCCATTCAGACTTACCACAGCAAATCTGTCCAAATTGTCCAGCCTCATTTTTATCTATAGAAGAATTGGAAGCTCACAAAAAGAAGCATGTTCGCGTACACCGCCCATTCGTTTGCAACATGTGCGACAAAAAGTTTCATGAAAAGTCAACGCTGCAACGACATATAGATGTAGTACACAACAAAGTGGCCACGTACTGCTGCGAGTATTGCCCCGAGCGATTTGTATCGGTTTCCAAACTGGCGAGGCACGTCAGGACACACGCTGGTGAACGTCCTTATCCTTGCAAATTTTGTGACAAGAGCTTTGCTAAATCCCATCATTATACGAGACATTTGCGTCAAACACACAGAGAGGCCAACCGTACCGGGCGCGGGCCCTACGGCGAGAGCGAGCAGTATCGCTGCGACCAGTGCGAGGGCACGTTCAGCACCCAGGACGGGCTGATTTACCACTCCGCCATACATGCCACTCAGAACCTCACGTGTCCACTGTGCCAAGAAAAATTTGAGGATGTTGATGCGGTCACCGCACACATAAAGTCACATGTTAATGGTACGGAATTTATGTGTGATTTCTGCGAGCTAGTCTTTACTTCAAAAGAAAAACTTGACACTCACCAAGCAACGATACACGAAGAGGAAATGCAGAgtGAGACCACATGTATTGACGAGTCGTCTATAGAAATGGAGTGCGATGAAGACGAAGAAGACGATAATGCAATTAATGTAAAAGAAGAAGGCGATCACatgataattgaaattaaaaaagcagCTGAATTCTTGATAAGCAACACAAAGGAAGATTCAGACGACAAACCTGACATCACTAATTCTGAAGAAAGCGAATCTGATACAATTTTAACAGAATTAGCGACTGTCGAGCCAATATCGGTGGTGAAAAAACCAATCAACATTGTAGAAGAGAAAGTACCACCACCATTACCGCAACTGTCTTCAGAACCATCACCTAAATCATTACCACAACCACTCGAACAAGCATTACCGTCAACGTCATTATCAACGCCGCCAACGTTGTTGTCGAAACCTGTCATACAAAAAGATGCGAAATCTGCAAGCAAAGCTAATGATAATAGCCAGACTGCAAGTATACTTCGTAAAGCTGAAGAAGTTAAACGCAAAGTAGTACTATCAACAGAGTCACTGGAAATAGTACAAACTAATGCAgttaTTGAAAAGAAGAGAGTTCCAGAGGACAAACCAGTCACAAAAGTAGAAACAACGAATAGTGGTGGGGCTAGTGACAAATCTTTGCGTCTACTAGAGAAGGAGCTACAGGATCTCAAAAGAACAAACAGCCGCACTGAAGTGACTAAAACGCCAATAAAATTGGTTGATACGGTTAGAAATAAGCGCTTACAGCTTCACACATCTACGCCGaagttaaaAACTGTAGAAGAAAGAAAATTACCAGTCATTAACAAATCACCAGCGTTAGAAAAGAAGATAGAAAAACGTATTATTACCAAAGAGAATAAAGAACCAAAAGAAGTCAAGGATGTTAAGAGCACTAACAGTAGTATTAAGGAAGAGAAGGAAAAAGAGAAAGAAACTCCAaagagtGTAATCAAGAACGGTTCAGGCAGCGATAAGAGCACTTCCGAAGAAATCGTGCGTCGCTCAACGCGGCCATCTAAAATAAAGAACTACGCCAAGATGATACGAGACCGCTCACAGATGGACTCCGAAGAAGAAACGAGCAGCGAGGATGATGAGGAATATACAGAATTTGATAGAAGTATAGAAacTCGCACGAAAACTCGTCGCATTAGTCAAACCAAAGTTTCATCAGTAAAGTCGCCCGCGGCCACGCCGTCGccggccgcgcccgcgccccgcAAGCGAGGGCGCCCAAGGAAAGAACCGCCCAAGGACGTGCCGACAAAAATTAGGAAAGAAGATAACGAGGAAGTTATAGAAGTACAGAAAGAAAAAACCAAGAGCACAATTCAAGAATCAAGCACATTGGAAAAGAATACTAGTAAATCTGCTTCTGAGGAAAAACACACTACACCGGATGTGCTTGTCTCTCCGACTGGGCAAACATTGAAGAAGGTACCCATTAAAGCACTCCCACCCGGAGTGAAACCTTTGCCCCTGCCAATGAATGCTAGacCACTCGGCACAGCTGAATTATGTGAAATGCAAATTGGCAAGAAGATGGTGAAAGTTCAAAAGATAGTCATGACTAAAGCTGAAGTGGAAGCCATGGCCAAAAAGGGGCTCGTGGAAATGAagGATGGAACAATGGTTTTGAAACAAGGTATAAAGCTTCCGACGGCGGACACGCTGGCAATTAAATCATCTTTAGTCGGACCAgaTCTAACAAAGGAATCTcctagtaaaaaagaaaaagctaCACCCTCAAGATGTGATTTTGGTGAAGAGTCACAATGA
Protein Sequence: MEKRKESLNIVKMCRFCLTQNETLESLYDRNRSGKNSPNLHLKILSCVSIEIFPSDKMPSFICQRCKFFMNLFYEYKKIVRQADETILQYIQHNSPMEIITWPSIFSKVYHRMNEIDIVKTLEGATVQVSSHDNSDSDEEDGNVYNIKIEDGPDDDTKTACVKIITSKESKEIENPLGKEQHEIDVVEKGLEDGCWACDECDCTYPLQQLLELHKAQKHRERTVECDQCDAKFFTKYDLSTHLLRHTDELPFQCVACSKKFKRLILLKRHEKLIHSDLPQQICPNCPASFLSIEELEAHKKKHVRVHRPFVCNMCDKKFHEKSTLQRHIDVVHNKVATYCCEYCPERFVSVSKLARHVRTHAGERPYPCKFCDKSFAKSHHYTRHLRQTHREANRTGRGPYGESEQYRCDQCEGTFSTQDGLIYHSAIHATQNLTCPLCQEKFEDVDAVTAHIKSHVNGTEFMCDFCELVFTSKEKLDTHQATIHEEEMQSETTCIDESSIEMECDEDEEDDNAINVKEEGDHMIIEIKKAAEFLISNTKEDSDDKPDITNSEESESDTILTELATVEPISVVKKPINIVEEKVPPPLPQLSSEPSPKSLPQPLEQALPSTSLSTPPTLLSKPVIQKDAKSASKANDNSQTASILRKAEEVKRKVVLSTESLEIVQTNAVIEKKRVPEDKPVTKVETTNSGGASDKSLRLLEKELQDLKRTNSRTEVTKTPIKLVDTVRNKRLQLHTSTPKLKTVEERKLPVINKSPALEKKIEKRIITKENKEPKEVKDVKSTNSSIKEEKEKEKETPKSVIKNGSGSDKSTSEEIVRRSTRPSKIKNYAKMIRDRSQMDSEEETSSEDDEEYTEFDRSIETRTKTRRISQTKVSSVKSPAATPSPAAPAPRKRGRPRKEPPKDVPTKIRKEDNEEVIEVQKEKTKSTIQESSTLEKNTSKSASEEKHTTPDVLVSPTGQTLKKVPIKALPPGVKPLPLPMNARPLGTAELCEMQIGKKMVKVQKIVMTKAEVEAMAKKGLVEMKDGTMVLKQGIKLPTADTLAIKSSLVGPDLTKESPSKKEKATPSRCDFGEESQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00457457;
90% Identity: iTF_00780484;
80% Identity: -