Basic Information

Insect: Heliconius sara
Gene Symbol: -
Assembly: GCA_917862395.2
Location: OU860784.1:7322694-7335938[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0011 0.081 13.8 0.2 2 21 34 53 33 54 0.93

2 12 0.15 11 7.1 0.3 1 12 221 232 221 241 0.86

3 12 9.7 7.2e+02 1.4 0.3 1 19 370 388 370 388 0.96

4 12 5.8e-05 0.0043 17.8 0.4 1 23 395 417 395 417 0.98

5 12 0.0011 0.081 13.8 1.7 1 23 437 459 437 459 0.98

6 12 0.00017 0.012 16.4 0.4 3 23 514 534 512 534 0.96

7 12 0.00063 0.047 14.6 2.6 1 23 550 572 550 572 0.98

8 12 2.2e-06 0.00016 22.3 4.2 1 23 578 600 578 600 0.98

9 12 0.0028 0.21 12.6 3.2 1 23 606 628 606 628 0.97

10 12 4e-05 0.003 18.3 0.6 1 23 634 656 634 656 0.96

11 12 0.00038 0.028 15.3 0.2 1 23 660 682 660 682 0.98

12 12 0.00053 0.039 14.8 0.1 1 23 690 713 690 713 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0011	0.081	13.8	0.2	2	21	34	53	33	54	0.93
2	12	0.15	11	7.1	0.3	1	12	221	232	221	241	0.86
3	12	9.7	7.2e+02	1.4	0.3	1	19	370	388	370	388	0.96
4	12	5.8e-05	0.0043	17.8	0.4	1	23	395	417	395	417	0.98
5	12	0.0011	0.081	13.8	1.7	1	23	437	459	437	459	0.98
6	12	0.00017	0.012	16.4	0.4	3	23	514	534	512	534	0.96
7	12	0.00063	0.047	14.6	2.6	1	23	550	572	550	572	0.98
8	12	2.2e-06	0.00016	22.3	4.2	1	23	578	600	578	600	0.98
9	12	0.0028	0.21	12.6	3.2	1	23	606	628	606	628	0.97
10	12	4e-05	0.003	18.3	0.6	1	23	634	656	634	656	0.96
11	12	0.00038	0.028	15.3	0.2	1	23	660	682	660	682	0.98
12	12	0.00053	0.039	14.8	0.1	1	23	690	713	690	713	0.96

Sequence Information

Coding Sequence: ATGGGAGAACCAATTTTATATTGTCCTCTTTGTTGCAACGATACATTTGAATCGAAACAGGCTCTTTatgatcatttatttaatatatcatctAATTTAGTTTGCTCCCTGTGTACTAAAAGATTTTCGACATTGGAAAAGCTTGTAGTTCACTTAAAGTCTGATAAttgcaaattaataaattccACTGAAACCAATGCTACACTTGAGGAAAGCTCACAAAATGAAACTAATGAGAGCTCTTTAAATAACACAACTTTGAAGCTAGAGTTACATAATGgtaatataacaaataaagatTTAGAAGACCAAATTACCTCTCAcacaataaaatcaaatttagaCCAAGGCTCTGAAGTAGGGAAAATGTATGTAGAATTACTTAGTAAGCAACTAATGAAACCATGTTTGCAAACTCAAGAGTTAAAATTAGTAAAAGAAGATGGACAAAGTCGCTATGTGATTTTAACAAATCAAGAATCTGTTTTAAATTCAGGTGTTGCCATTGTTACAAAGCAAAATAATGATGGAACAATATCATTAACTACCTTAAAAGatACACAAACTGTTGCAAACACAATTGATAAAACTGAGAGTGAAAGCCCTATGCCTTTAGAGACTGCCGAGGAAACAGAGCCTGATAAGAGCCAAGAGGAAATCTATAGTTGCAACACATGTGGTGTATCATTTTCATCTGTATTGGAACATATacagaattatcacaataaCCAAGATGTTGTAGTTgagGAACCTTTAGAAGACAATAATAGCAGTACTGTAGAATATGAACAGATTGCAACCGAAGAAGTGGCAGATAAACAAACTTCAAGAAGAATGATCACAGAAACTGGAGATATAATAGAAACACCTTTGATTGAAGAAGATACAACTAATGATGcgcCAAATAAAACTATGAAATTTTTGATTCCAATAAAAGACGAAACTCAAGATAAAAAATTGCGCACTCTCACTAGGCGATATGTACAAATCGATAAGTTTTGTAACAGTATAGTTAAGGATATTAAACCAAACAATgAAAAGGAAGGACCATACCATAAAGTGGTTATAAAAGAAATGCAAACATTAGACGGTGATAAAATGAAAGTGTACAATTGTATGTCGTGTAATGTGTATGTGTCGAGTCTGTCCGAATTCAATCAACATCCTTGTAAAATTTTGAAATACCCATGTTCTCAATGTCCTGTAGCCTACGAAAATTCAAAGTCACTATGCGCGCATATGAAAGTGCATAAAACAAGAATAGaatttggTGCAGATACTACCTATACAATGCCACCGCCGGAGAAGTTCGAATGTGAGACATGCAACACAGTGTTCCTAACAAGCAAATCATTGAAACTGCACAAGAGGATGCACGATCCTgtcaaatatcgcCCCATAGAACCTCCAGTAGAAACATGTGACGGCGCAGTGGGCAGCAATGACAAGTTCTTATGTTCAATATGTCATAAACTAATACCCATAGACTACAGAACAATACATCAGAATTCTCATAAAACAAACAACACTACTATAAATTGTGATATATGCAACAAGAAATTTGTGTCTAAGGAATTTTTAGATATGCATATGAGCGTACATAATTTGGATAAGGTAATGATCGGAAAACAAGATAAATCTCTTCCATATACATGTCTCTACTGTAATAGGAAATTTGCGAGACCGCACGAAAAAGTCAAACACGAAAGGATACATACAGGCGAGAAGCCGCACTCGTGCGGCATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCCTACGCCTGCGCGCAGTGCGGCAAGAGGTTCAAGGCACACAGTGTATACAACCACCACTTATTAACACATTCTGAAGTTCGCGCGTACAAATGTCCGTTCTGTCCCAAAGCATTCAAGACCTCAGTGCAGCTCGCAGGTCATAAATTTTCGCATACTAAACCATTCTCCTGTCAACAGTGTAATAGGCCGTTCGCATCGCTGTACGCAGTTCGTATGCACATGGAAGTTCACGCGAGACAGAACAATTTGAAGTTTTCCTGCACACTCTGCGGGGCGAGCTACGCGCGCGCCTTCGCCCTCAAGGACCACGTCAAGCAGGTCCATAAGCAGGATGTTGATAGCAATGATTTGACGTCACTGAAAGAAGAAAGCTGGATGGCACAAGAGAATACGGACGGATCTGATAGTCTCAAAAAAGAATTGCCACCAGAAGAGATGAATGAGCTGGGTCTTAATTCAGGTGAATTGATAGTtccatag
Protein Sequence: MGEPILYCPLCCNDTFESKQALYDHLFNISSNLVCSLCTKRFSTLEKLVVHLKSDNCKLINSTETNATLEESSQNETNESSLNNTTLKLELHNGNITNKDLEDQITSHTIKSNLDQGSEVGKMYVELLSKQLMKPCLQTQELKLVKEDGQSRYVILTNQESVLNSGVAIVTKQNNDGTISLTTLKDTQTVANTIDKTESESPMPLETAEETEPDKSQEEIYSCNTCGVSFSSVLEHIQNYHNNQDVVVEEPLEDNNSSTVEYEQIATEEVADKQTSRRMITETGDIIETPLIEEDTTNDAPNKTMKFLIPIKDETQDKKLRTLTRRYVQIDKFCNSIVKDIKPNNEKEGPYHKVVIKEMQTLDGDKMKVYNCMSCNVYVSSLSEFNQHPCKILKYPCSQCPVAYENSKSLCAHMKVHKTRIEFGADTTYTMPPPEKFECETCNTVFLTSKSLKLHKRMHDPVKYRPIEPPVETCDGAVGSNDKFLCSICHKLIPIDYRTIHQNSHKTNNTTINCDICNKKFVSKEFLDMHMSVHNLDKVMIGKQDKSLPYTCLYCNRKFARPHEKVKHERIHTGEKPHSCGICGKSFRVSYCLTLHMRTHTGARPYACAQCGKRFKAHSVYNHHLLTHSEVRAYKCPFCPKAFKTSVQLAGHKFSHTKPFSCQQCNRPFASLYAVRMHMEVHARQNNLKFSCTLCGASYARAFALKDHVKQVHKQDVDSNDLTSLKEESWMAQENTDGSDSLKKELPPEEMNELGLNSGELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00782054;
90% Identity: iTF_00780467;
80% Identity: -