Hsar007414.1
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- -
- Assembly
- GCA_917862395.2
- Location
- OU860786.1:12797903-12801808[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7 1.6e+03 -0.7 0.0 4 13 33 42 31 46 0.81 2 2 1.8e-08 1.8e-05 24.8 0.0 2 38 52 89 51 94 0.88
Sequence Information
- Coding Sequence
- ATGAGCTCTTTCCCCCACCTCACGCGCCGCGCGTTAGACCGCCCCCGCTTCCGCTACCGCCTTCGGCGCCGCCGCCGTGCCTTTAGATCACACATTCAGTTTTCAGAAGCGATAAATGCCTCACAATCAAGCAAGATACGAAAAAGCTGGAAAGAAAAAACAATGGCAGAAGCTATAAAATTCGTCCGGGAAAAGAAAATGGGATATTTGAAAGCAGCACATCAGCATTTTCAGGTGTCTCGATCGACATTACTTCGTCTATGTCAAAAAGATGAACAGTCTCCAGAAGTGGATGTAGCTATTACATTAGGACAAAAAACTATATTGGGCTCCCAACTTGAACGTCAGCTATTAGAATACATATTAATGATGGAGAGCAAATTTTTCGGTGTAACAAGAAGTTGA
- Protein Sequence
- MSSFPHLTRRALDRPRFRYRLRRRRRAFRSHIQFSEAINASQSSKIRKSWKEKTMAEAIKFVREKKMGYLKAAHQHFQVSRSTLLRLCQKDEQSPEVDVAITLGQKTILGSQLERQLLEYILMMESKFFGVTRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -