Hsar020440.1
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- ttk_1
- Assembly
- GCA_917862395.2
- Location
- OU860800.1:2266196-2275434[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-16 6.9e-13 48.5 0.0 2 42 354 395 353 398 0.94
Sequence Information
- Coding Sequence
- ATGTCTCAGCAGTATAGTCTGCGATGGAATAACCATCAaccaaattttatatctatgtttGGTACATTATTGGCTACAAAAAACTTAGTAGATGTGACTCTAGCTGCTGAAGGTCAACATTTAGTTGCACACAAAGTGGTGTTGTCGGCATGTAGTACATATTTTCATTCACTATTTATTGATAATCCTTCACATCATCCAATAGTTATTTTGAAGGATGTTACATTTAATGATTTACGGACAATGGTAGATTTTATGTATTATGGAGAAGTAAATGTCACAGAAGAACAATTACCACAgGTATTAGAaacagcaaaaatattaaaaatcaaaggtTTAACAGAAATGCCAGACTCTACATCATTGACCAGATCTCAAGGTTCATCAGCCGACTTGCCTACTGCCGAAAATTCAAATGAAACACTCAGACCTTCAATTTCCACACCCTCACCCAATTTGAAACCAAAAAGacgTAGAATGAGCTCAACGGGCTCAGTGGGAAATTTGGGTGTGGATGACAATAGAAGCAATGACTGTGGACAAAGTATGGAATTGATGCGCGAGGCAGTAACATTAAGCAGTGTGCCACAACAGAAACGAAGGGAAATGGACGAACGGATAGACAACTCACAACAGACTGGAGAATCATCAAGCATTAATATAGACCAACTTGCCATGGATGCAAATTCTGCTGTTGGTATGTCACAAGGCCAATGGAGTATGCTGGAGCATACGTACCCGCGATATACGAACGCGTGCCTGCAGCCCGACCAGGGCATGTACCTCAACAACGTGATGAACACGCACGCGCACgggcacacgcacacgcactcGCACTCGCACTCGCACGCCGACGCGGACATGGGCGGCTACGGGCAGGTGCTGGGCGGTGGCATGCCCGCGCCGGGACCCAGCTGCGGGGGCGTGGGCGGCGGCGGAGGAGTGGGAGGAGGGGGCGTGGGCGATGCGCAGGGCGCGGGTCAGGGGGTGGGAGGAGCGGCCGGCGTGGGGGGGAGCGCGATGCAGCAGAAGCGCAAGCGTACGACCAACCCGCAGGCGGAGGAGAACTTTCAGCGCGCGCTCGAAGCGGTGCGCTTCGGCGGCATTGGGTTCTGCAAGGCAGCGCGCATGTTCGGTGTCAACAATCGTACGCTCTGGCTGGAGTACAAGAAGAAGGGTTACCCTAACAACCGGCCGAGCATCAAGAGTCGTATCAAGCGCGAGCACGTGACGCCGCCGCCCAAAGAGGAGGCGCCGGCGCAGGACGCACAGCTAGCGCTGCTGTGCCCGCCTCACGCGGTGCCCGTTCCGTTCCTGGACGCGCGCCCCGTTGAGTTCAACATCATCAACGGTGTGAACTTCCCGTTGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFGTLLATKNLVDVTLAAEGQHLVAHKVVLSACSTYFHSLFIDNPSHHPIVILKDVTFNDLRTMVDFMYYGEVNVTEEQLPQVLETAKILKIKGLTEMPDSTSLTRSQGSSADLPTAENSNETLRPSISTPSPNLKPKRRRMSSTGSVGNLGVDDNRSNDCGQSMELMREAVTLSSVPQQKRREMDERIDNSQQTGESSSINIDQLAMDANSAVGMSQGQWSMLEHTYPRYTNACLQPDQGMYLNNVMNTHAHGHTHTHSHSHSHADADMGGYGQVLGGGMPAPGPSCGGVGGGGGVGGGGVGDAQGAGQGVGGAAGVGGSAMQQKRKRTTNPQAEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPKEEAPAQDAQLALLCPPHAVPVPFLDARPVEFNIINGVNFPLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00774591;
- 90% Identity
- iTF_00778104;
- 80% Identity
- iTF_00782749;