Hsar013731.1
Basic Information
- Insect
- Heliconius sara
- Gene Symbol
- retn
- Assembly
- GCA_917862395.2
- Location
- OU860793.1:4034205-4041463[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-17 1.5e-13 51.4 0.1 29 89 4 62 1 62 0.93 2 2 5.5 1.1e+04 -2.7 0.0 24 40 102 117 93 121 0.73
Sequence Information
- Coding Sequence
- ATGGCGAAATCAGTATTGGATCTGTACGAGCTCTACAACCTGGTGATAGCCCGCGGGGGTCTCGTGGAGGTGATCAACAAGAAACTCTGGCAAGAGATCATTAAAGGCCTGCGTCTTCCATCCTCCATAACTTCAGCCGCGTTTACTTTACGCACACAatacatgaaatatttatatgattatgaGTGCGACAAGAAGAACCTGTCGACTAGGGGCGAGCTGGACGCGGCTATCGAGGGCAACAAGCGGGAGGGACGTCGCGCCTCCGGACATTATGACGCACAGGCTGCCATGGCTATGCAACCCATAAACCGAGTGCCAGTGTCTCTCGCGCAGTTATCCCAGCACATGCAGCCGTTGTCTCTCTCGCTGGGGGGTGGGGTCTCGGGGGTGCCCCGTATGCCGCCCCTGCCGCTCCCTCCGCACGTACCAAACCACGACTTAGAATACCGTATGAGGGAATACATTAGAATAATGCAGCAGCAACAGGATATGATTATGAATGGGTCAGAATCTCCTCCAGGTACTTCAATGATGTCTCCAAGAGACGCGGCGTTGGCAGCCCTCGACGTGTCACGACTTACCCTATGGTCTACACTCGTCAATAATAGCAGCCCACAACCGGAGTTGGAACCTCAACGTGAAGCCCTAAACCTCAGCGAGAGCCCCACGCTACCGTCCAAGCGCGAGGCATGCCGCTCCCCTCCCCCGCCGGCCAAGCGGCGCACGCCCCTCCACCGCGCGCTTTCCCCGCCCGCGCGTGGCGGGCCCTCCCCGCGTTCCTCCCCGCACGCGCGCGCCGGGCCCTCCCCGCACTCCCCGCACGCACGCGCCGGGCCCTCCCCGCACTCCCCGCACGCACGCGCCGGGCCCTCCCCGCACTCCTCCCCGCCGAGCGCGCCGCAAGTCAACGGGAACGCTAACAATGGCGTCGGCGCTGCTTTCAAAATTACTACTAGAGGCGACGCAAACACCGGCGACCAACAGCTCGTGGTCTCAATCAAACTGAACGGCGTCACGTATGAGGGCGTCCTCTTTCCCACAGAGGACGGCCATCAGCACATGGTTtcttaa
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECDKKNLSTRGELDAAIEGNKREGRRASGHYDAQAAMAMQPINRVPVSLAQLSQHMQPLSLSLGGGVSGVPRMPPLPLPPHVPNHDLEYRMREYIRIMQQQQDMIMNGSESPPGTSMMSPRDAALAALDVSRLTLWSTLVNNSSPQPELEPQREALNLSESPTLPSKREACRSPPPPAKRRTPLHRALSPPARGGPSPRSSPHARAGPSPHSPHARAGPSPHSPHARAGPSPHSSPPSAPQVNGNANNGVGAAFKITTRGDANTGDQQLVVSIKLNGVTYEGVLFPTEDGHQHMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -