Basic Information

Insect: Heliconius numata
Gene Symbol: Sall1
Assembly: GCA_016802625.1
Location: JAEBDU010000061.1:1287577-1298749[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.4 6.5e+02 1.8 0.2 2 23 6 27 5 27 0.93

2 13 0.013 1.3 10.4 0.6 1 23 1001 1024 1001 1024 0.91

3 13 4.7e-05 0.0047 18.0 1.7 2 23 1127 1148 1126 1148 0.96

4 13 4.7e-05 0.0048 18.0 3.7 1 23 1154 1176 1154 1176 0.99

5 13 0.014 1.4 10.3 2.8 2 23 1183 1204 1182 1205 0.95

6 13 0.47 48 5.4 1.9 5 23 1218 1236 1216 1236 0.97

7 13 0.017 1.7 10.0 1.1 3 23 1243 1264 1242 1264 0.96

8 13 0.17 17 6.8 0.1 2 23 1279 1299 1278 1299 0.95

9 13 0.0032 0.33 12.2 0.8 1 20 1305 1324 1305 1327 0.88

10 13 0.0041 0.42 11.9 1.4 1 23 1335 1357 1335 1357 0.98

11 13 0.0048 0.49 11.7 7.2 1 23 1363 1385 1363 1385 0.98

12 13 5.6e-06 0.00057 20.9 1.3 1 23 1391 1415 1391 1415 0.98

13 13 0.00088 0.089 14.0 5.1 1 23 1421 1443 1421 1444 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.4	6.5e+02	1.8	0.2	2	23	6	27	5	27	0.93
2	13	0.013	1.3	10.4	0.6	1	23	1001	1024	1001	1024	0.91
3	13	4.7e-05	0.0047	18.0	1.7	2	23	1127	1148	1126	1148	0.96
4	13	4.7e-05	0.0048	18.0	3.7	1	23	1154	1176	1154	1176	0.99
5	13	0.014	1.4	10.3	2.8	2	23	1183	1204	1182	1205	0.95
6	13	0.47	48	5.4	1.9	5	23	1218	1236	1216	1236	0.97
7	13	0.017	1.7	10.0	1.1	3	23	1243	1264	1242	1264	0.96
8	13	0.17	17	6.8	0.1	2	23	1279	1299	1278	1299	0.95
9	13	0.0032	0.33	12.2	0.8	1	20	1305	1324	1305	1327	0.88
10	13	0.0041	0.42	11.9	1.4	1	23	1335	1357	1335	1357	0.98
11	13	0.0048	0.49	11.7	7.2	1	23	1363	1385	1363	1385	0.98
12	13	5.6e-06	0.00057	20.9	1.3	1	23	1391	1415	1391	1415	0.98
13	13	0.00088	0.089	14.0	5.1	1	23	1421	1443	1421	1444	0.95

Sequence Information

Coding Sequence: ATGGATCAAAGAGTTCAGTGCCCTGTGTGTACACTGTATCTACACAGTGGGATGTCATTGGCATCACATTTGGATACACATCCAAAAGATCAAGTAATAAAAGCATTATGTAGCTTATCAGCAAAAAATTCTACCTTTGGAAGCAGAAGTACCACTCCTTTGAACTCAGAAAGGTCATATAGAAGCAGATCACGTACTCCTGCTACAGATGACAGTGGCCGCTGGGGCAACTCCCATCGTAATAGTGATACTGATAGGTATTGGAGAAGAACACCGAGCCGCACGAAATCAACCCCAATTTCAAGCAATTCAAGAAATCCAACACCAGATATTAGAATTGGAAATATTTCATTTGAAAACCATAACTCTAATAATAATTCCAGTCAGTGTTCTGATTCATGTACAGTGAAATCTGATAAAACACAGAAGACATATGGCTCTAATGGTCAGCTGTCAGCTTCTGAATTTGATCAACAATATCCCTACTATGGAGATCAACAAGAAGATACAGAAATAAAATTTTCAAGAAGTTCAGAATATAGTGCACAAGTAGAGAATTCAAATAATTTATTTGCATATAGTATGCCTGTCATGGGGCCAGGAGTAAAGCTTCCACCAGGTATGATGCCAACAGTGCCTAGACGGAGTGGTGACTTTGCAAAGATTTTACCTAAACAAGGAAATTTATTAATGAAAGCCAATATGAGTGGAATGCAATATATGTCCCCTGGAGGGAAACCAATGCATGTAATGATGCCTACACCACCAACATTTATGCAAAAAAATATGCAAAATAATATGATTATGGCTGGAAGTATGCCAGGGTCACCAATGCTAGACCCAAAGTCAATTCCTTCATCAATGAATCCTCTTAGTAGCCAATTTAACCCACTGAATACTGGATTTACACCTGGAACTACTGTAGTTACACAAAACTCTCATATTATTTATAGGGAAATGGTGCACAATATTGATGGTAAGCCTTTTCCTTCAAATATCCCACCTGTGCTTGGAGGCCCTGAAACTGTTACAAATGTGGCTCAAAGTAGTTCTATGTATCAAAATGTAATGGTTGTTGACCAGTATGGTAACACATCGTGCATGTATTCAACACCGCAACATCTAATGCCAAAACCATGTAATCCTATATTTAATGAAGGTATACCATCATATATGCAAAGTATGACTAATAAAACTTCCCAGCGTATGGTCAATGACACTAATAAAACATTGATTATTGAAGTCAGTCCTATGACAGACGGTCAATCTAATGAAGAAAGTCAAATACCTCGCACTCCACAGCAAAAAAATCATCCAATTAAGAGAAAACTTGAAAAAGAAAAGGGAGAATTGAAAACTGAATCACCAGGGTCTAGTAAAGGATTAAAAATTCTTAGTAATATTAAAGTGGAAGTTCCTGTCCAACATCATAAAAATATGCTTAATACTGTTATGGATTTGACAGGTTCAGCTGATTCTGATTACCCTGATCGTTCAGTAACTCCAGAAAAAATATTGCCAGATTTAGATGAAGATCCCACAAGTATAATGGATGAATGTACCCAACGTTCATGTATTAGTGTAGATAGTATAACATCAAATGCATTTACTGGAATAAAAAGTTCATCTAATCAATCTTTTAAAGATTCTTCGTCTAAATCAAACACTATAGAAAATAAACTAGATACAGAATTTTCGGACAGTTGTCCAGTTCCTGATCTTATATGCAATGAAAAACCTTCTATATCTCCTTGCAGTGAACTATCGGAACAGGGTGATAACTCAACTGAACACATCCTACCATCACCTAAACCCGAAAGTAGTCAACCATACCAAAGTTCTTTATGTAATAGTAATGATACCCGCAAAAAATCTGGCAAAGCACAAAAGAATAATGTTTTAAGACTGAACAATATTTTCGTAAAGAAACATAAAAAAATTTTGCAAATAAGGAATTCTAAATTGGATCATCTTTCAAAAGCAGCTCTAGCAGAGCAAGAGCCAAGAGCGTCATCATCATCTCGTAAGTCACCAGAAAATTTTTCCATGACTAAAATCCGTCAACCAGATTTAACGGAAGTTAAACCTACTCTACAGACTGTTTCCATTGAAAAAATCAAAGATAACGATGTTGACGATCGTAATAATTTCGACGCTAATACCGAGGAACAGTCGATGGATATCGAACCAGTTACTCCGTCCAACGTCAATCATTCCAATGATTTTTCAAGCAATGCATATAATGGCTTGGTGCAAATTAAAGAGGAAGTAAATTCTAGTAATGAATTTAGCAATGAAGCCGTAAGGTCTCCTGCTGATATTGCACCTATGGAGACACTTAGGCCCATTAATGTGATCAATTATAGCAATATGGCGGATTTTGATGATGATTCAAACCATAGGGAGCTACTAGAATTAGAGGCAACGTCAAAAAATAAGCAATTTGTGTCTATGATGAATGAAAATTATTTTGGTGACAATATTTATGCAGATTATTTCACACCTGACAGAGGAGAAACTTTCGAAGCCCAGAAGGAATCTAATTTTTCTAAAGATGTTGCTAAAGACGCGATGTACGTTTGGGGAGAGCCTTCACAAAAGGAGAGTGAATTCGTTTTGCCCAATTTCATCCACGAGAGTTATAAAATAGCAGAGAGTGGTATGGATTATTCCGACATTGGCGCGGGGGAAGAACAAACGGATAGGGGCGAAAAAGACAGCAAAGTAGATGTTTTATGTGAAAGTAGAAGTGAGGGTGAGCCACCATTAAACATTTGTGCAGATGAAAGAATGCCGCCGAGAGGTGAACTGAGCGGGCAGGAAAGCAATGGAGATATGGAGTCACCTTGGAACGGGATGTATTCCGGAGTGCCGCCCGCGGCAGAAGCGTACGATCTAATGGCGCGGGAAAGTTGGGTGTCAGACGGCTCTGACGTTGAAGTGACAGAGAAAATTGAAAATATAGAGGAAGATATTCCCTTTCCAAAGGCGCAACGTATGCACAATTGTGCACAATGCGGTAACAAGTTCCCAAACCTTAAGGAACTGCGTGCCCATAAAGCAAACGTTCACGTGTTACCAACTTGCTCGAACTCAAAAACTTCATACAGCCGCCTTATGACGGCGAGAGCGATAAAGAAGGAGGAGAAACCCGATGAGCATGTTTTAGCAGGCAATCTCTTATCAATGGACTCTAAGGAAACAATAGCGTCTGCTATGCTCCAAGTCTACCACCAGCAATTTGAAGCTAAACCGTCCCTCGACGGCATATTAAAGCAAGAAAACAAGAAACGCAGGAAAGATTTCATTTGTCCGACATGTAAAGTGGACCAATTAACAGATGCGGCTTTCCACGCCCATCTTAAAATACATCCGCTTGAGTGTTTGACTTGTGGAAAGTGTTTCTTTAGAAGAGCAAACCTGGCCTTACATGTGAAAACACATTTAGGGATAAAGAACTATAAATGCGACATATGCGAGAAGCGTTTCATAACGCGCCAGAAGCTGACGGAGCACCACAACACGCACACGGGCCGCGCGCCCGTCAAGTGCACGCTGTGCGACGACACCTTCAGGCGGTACTCCAATATGGTGCAACACAGAGACCGTCACCACTTCAAAAAGAAGACAAAAATCCGCGACTTCGTCTGCCATTGCGGTGCTGTGTTCCACTCTAGGGCCAAGCTCCTCTGGCATAAGGAAACCCACGAGGACAAGCCCAAAGCGTGTTTGTACTGCAGTGACAAATTTGTTCATGCTGCATCGCTTACGAGACATGTGCGGAGGTCGCATAATGAACATTTCGCTGATGCGCAAAAGGGAAGGGAAAATGTGCCTTGTCCTGTGTGTAAACAGTTATACCTCCGTGCGAATCTACGCGCTCACCTCCTAACGCACAGCGGCAAGCGTCCCTACAATTGCATCATATGCAACAAAGGATTCACAACCAAATGGAACCTCAAACTGCACCGGTGGACCCACCTCAGTCGTTCAGCGAAGCCCTATAAATGCACCCTATGCAAAGGTGCATTTATACGACACACAGAATATATATCACACATGAATGCTCATAAATCTGTACGTCCCTATACGTGCAACTACTGCGGCTGTCAGTTCATAAGGAAATACAACTGTCAACGACACGTCAGAGAGCACGAAATGGCGAAGAAGTATGTGTGCAAAGTGCCGGAATGCGGTAAATCGTTCCATAGAAGCTATTATTTGTCCGAACATATGAAAGTGCATAGTGGTGCGAGGCCGTTCTCCTGTAATATATGCGGGAAAACTTCCAGCAACAAGTCAAATCATAATAAACACGTCAAAATACATCACGCTCGAGAACCGGTTGCGACTGAAGCGTAA
Protein Sequence: MDQRVQCPVCTLYLHSGMSLASHLDTHPKDQVIKALCSLSAKNSTFGSRSTTPLNSERSYRSRSRTPATDDSGRWGNSHRNSDTDRYWRRTPSRTKSTPISSNSRNPTPDIRIGNISFENHNSNNNSSQCSDSCTVKSDKTQKTYGSNGQLSASEFDQQYPYYGDQQEDTEIKFSRSSEYSAQVENSNNLFAYSMPVMGPGVKLPPGMMPTVPRRSGDFAKILPKQGNLLMKANMSGMQYMSPGGKPMHVMMPTPPTFMQKNMQNNMIMAGSMPGSPMLDPKSIPSSMNPLSSQFNPLNTGFTPGTTVVTQNSHIIYREMVHNIDGKPFPSNIPPVLGGPETVTNVAQSSSMYQNVMVVDQYGNTSCMYSTPQHLMPKPCNPIFNEGIPSYMQSMTNKTSQRMVNDTNKTLIIEVSPMTDGQSNEESQIPRTPQQKNHPIKRKLEKEKGELKTESPGSSKGLKILSNIKVEVPVQHHKNMLNTVMDLTGSADSDYPDRSVTPEKILPDLDEDPTSIMDECTQRSCISVDSITSNAFTGIKSSSNQSFKDSSSKSNTIENKLDTEFSDSCPVPDLICNEKPSISPCSELSEQGDNSTEHILPSPKPESSQPYQSSLCNSNDTRKKSGKAQKNNVLRLNNIFVKKHKKILQIRNSKLDHLSKAALAEQEPRASSSSRKSPENFSMTKIRQPDLTEVKPTLQTVSIEKIKDNDVDDRNNFDANTEEQSMDIEPVTPSNVNHSNDFSSNAYNGLVQIKEEVNSSNEFSNEAVRSPADIAPMETLRPINVINYSNMADFDDDSNHRELLELEATSKNKQFVSMMNENYFGDNIYADYFTPDRGETFEAQKESNFSKDVAKDAMYVWGEPSQKESEFVLPNFIHESYKIAESGMDYSDIGAGEEQTDRGEKDSKVDVLCESRSEGEPPLNICADERMPPRGELSGQESNGDMESPWNGMYSGVPPAAEAYDLMARESWVSDGSDVEVTEKIENIEEDIPFPKAQRMHNCAQCGNKFPNLKELRAHKANVHVLPTCSNSKTSYSRLMTARAIKKEEKPDEHVLAGNLLSMDSKETIASAMLQVYHQQFEAKPSLDGILKQENKKRRKDFICPTCKVDQLTDAAFHAHLKIHPLECLTCGKCFFRRANLALHVKTHLGIKNYKCDICEKRFITRQKLTEHHNTHTGRAPVKCTLCDDTFRRYSNMVQHRDRHHFKKKTKIRDFVCHCGAVFHSRAKLLWHKETHEDKPKACLYCSDKFVHAASLTRHVRRSHNEHFADAQKGRENVPCPVCKQLYLRANLRAHLLTHSGKRPYNCIICNKGFTTKWNLKLHRWTHLSRSAKPYKCTLCKGAFIRHTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00782936;
90% Identity: iTF_01182133;
80% Identity: -