Hnum012106.1
Basic Information
- Insect
- Heliconius numata
- Gene Symbol
- -
- Assembly
- GCA_016802625.1
- Location
- JAEBDU010012640.1:7143-9297[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-13 9.9e-10 38.7 0.0 1 41 67 107 67 110 0.93 2 2 6.5 1.1e+04 -3.0 0.2 15 23 196 203 196 204 0.80
Sequence Information
- Coding Sequence
- ATGAGGTCAGCTAACAAGCCAGAAAAGGCGCAGTTCGCATTGGAAGACCTTTTCTACACTGAGAAGCCACATGAGCAGCAATTTTATGAATACCCTCAATGTTACATCCCAGATGAGCACTATAACTACTTGTTTGTTATTTTTAGTTTTAGATGCCACGAAAGAACACCCATTTCGAATAAAAAAAGGAAGACCTGGGATCCTGAAAAAATGAAAAGAGCGATTGAAGCCGTCCGAAATAAAACTATTGGTTACAAAAAAGCAGTCAAAGAATTTGATGTACCGAGATCTACTTTAAAACGACTAGTAAAAGATACCGAACAATCTTTGGATATGATAGTGAATAAACCACTCGGAAGAAAGCCTATCCTGCCAACTGTTTTGGAGAAACGTTTACTGAAATATATTTTATTCATGGAGGCCAGGTTTAATGGGTTAACTAGACAAGATGTCAGGCGGGCTGCTTACAGGCTTGCCTTAAAATATAACATAGCAAATAAATTCAGAAACAATATGGCAGGCAGAGCGTGGTTAGACCATTTTTTGGATAGACACAAAGACGAATTATCTCTGCGTGAGCCAATAGGTACGTCACAAGCTCGTGCCCAAGGATTTAACAAAGACGCTTCTCTTATATAA
- Protein Sequence
- MRSANKPEKAQFALEDLFYTEKPHEQQFYEYPQCYIPDEHYNYLFVIFSFRCHERTPISNKKRKTWDPEKMKRAIEAVRNKTIGYKKAVKEFDVPRSTLKRLVKDTEQSLDMIVNKPLGRKPILPTVLEKRLLKYILFMEARFNGLTRQDVRRAAYRLALKYNIANKFRNNMAGRAWLDHFLDRHKDELSLREPIGTSQARAQGFNKDASLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -