Basic Information

Insect: Heliconius nattereri
Gene Symbol: -
Assembly: GCA_013403645.1
Location: JAAIXI010000247.1:4645502-4654757[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.7 1.9e+02 2.9 0.2 3 23 115 135 113 135 0.94

2 18 0.36 25 5.7 0.2 2 23 139 161 138 161 0.91

3 18 0.18 12 6.7 0.4 2 23 442 464 441 464 0.96

4 18 0.25 17 6.2 0.2 1 20 472 491 472 492 0.95

5 18 0.027 1.8 9.2 0.3 2 23 503 524 502 524 0.93

6 18 1.4 92 3.9 1.2 1 23 540 563 540 563 0.91

7 18 0.006 0.41 11.3 1.6 1 23 572 595 572 595 0.94

8 18 3.3 2.2e+02 2.7 2.0 3 23 671 692 669 692 0.88

9 18 2.3 1.6e+02 3.1 2.6 1 23 697 720 697 720 0.92

10 18 4.3e-05 0.0029 18.1 1.2 1 23 726 748 726 748 0.97

11 18 7e-05 0.0048 17.4 1.2 1 23 755 777 755 777 0.98

12 18 7.8e-05 0.0053 17.2 2.3 1 23 782 804 782 804 0.96

13 18 0.00058 0.04 14.5 1.8 1 23 810 832 810 832 0.99

14 18 1.6e-06 0.00011 22.6 1.4 1 23 838 860 838 860 0.98

15 18 7.5e-05 0.0051 17.3 1.5 3 23 868 888 867 888 0.98

16 18 0.00015 0.011 16.3 0.2 2 23 896 918 895 918 0.97

17 18 0.00099 0.067 13.8 0.2 1 23 923 945 923 945 0.98

18 18 0.12 8 7.2 4.1 1 23 951 974 951 974 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.7	1.9e+02	2.9	0.2	3	23	115	135	113	135	0.94
2	18	0.36	25	5.7	0.2	2	23	139	161	138	161	0.91
3	18	0.18	12	6.7	0.4	2	23	442	464	441	464	0.96
4	18	0.25	17	6.2	0.2	1	20	472	491	472	492	0.95
5	18	0.027	1.8	9.2	0.3	2	23	503	524	502	524	0.93
6	18	1.4	92	3.9	1.2	1	23	540	563	540	563	0.91
7	18	0.006	0.41	11.3	1.6	1	23	572	595	572	595	0.94
8	18	3.3	2.2e+02	2.7	2.0	3	23	671	692	669	692	0.88
9	18	2.3	1.6e+02	3.1	2.6	1	23	697	720	697	720	0.92
10	18	4.3e-05	0.0029	18.1	1.2	1	23	726	748	726	748	0.97
11	18	7e-05	0.0048	17.4	1.2	1	23	755	777	755	777	0.98
12	18	7.8e-05	0.0053	17.2	2.3	1	23	782	804	782	804	0.96
13	18	0.00058	0.04	14.5	1.8	1	23	810	832	810	832	0.99
14	18	1.6e-06	0.00011	22.6	1.4	1	23	838	860	838	860	0.98
15	18	7.5e-05	0.0051	17.3	1.5	3	23	868	888	867	888	0.98
16	18	0.00015	0.011	16.3	0.2	2	23	896	918	895	918	0.97
17	18	0.00099	0.067	13.8	0.2	1	23	923	945	923	945	0.98
18	18	0.12	8	7.2	4.1	1	23	951	974	951	974	0.97

Sequence Information

Coding Sequence: ATGGTATCCGACGAGTCGGATGATGAACCTCTGTCTAATTTGGCAGCCAAGAAAAAGTCCGGAGAGTATGACTTTGAGCCGCCAAGTAGTAGTGATgaagaacctaaaaaaaagaagaagaaaaaggaACTGCCGGCAAAAAAATTAGgagtaacaataaaattaaatcgaaaATTAAACTCCCTGGTCGGTCCCGCTGTAATAGAGAGACCGTCCGATGTTTGGCTTTATTTGAAAGATCTGAATCCAACCGGACCTTATAGTTGCTTACTATGTACAGATTGGTTTATAAATAGATCtaaaatgattttacattatgcaTTAAATCATAAGAAAGATTTTTGTGGTATTTGCAGATATTTTGTACCAGACAGGAGTGCATGGTTTGAACATGAGAAGTTTCATTCACCATGGCCCTGTTCACAATGTGTGGAAACCTTCTCCACTGATGTTCAGTTACGTTTCCATCTCAGCTCTATTCATAACTTAGTTCACTGCCGCCTCTGCCACTTTAGGGTGACAGCTGATGATGATTACAGTTctcatttatttcaaaaacacaATGTTACCAATGCTGCTTGCCAAAACGATGAACAGTTTTGGCAAGTAGATTATGAAGGAGATGATAAGTTTATGTGTTCACTATGTTCAAAGCCAGATTTACTGTGCTCAACTTTTTTTGCACATTACATGGGCTTTCATCATTTCACATTGAAATGTTTGACTCATCTTATAGCTGGGAAAAATACATCGTTCTTAGTGGAAGGCGCTGATGTTACTGATCGTTTCGTCAATGAACAGCTAAAGGGTCATGTAAGACTTGGTTATGTAGACTTGACACCAAAGACTGACACaccaaaaatactaaaagaaaatattgtaccAATTGAAATTGTTCTGCCTGAAGTAAAACAAGAAATTGTAAGTGACCATGAAGAGCAGAACAATGTGCCACCTTTGACACCTGCACCTTCACTTACACCTGCACCTACATCTGCACCTACCCTTCCACCTACCCTTCCACCTACATTTCCACCTACACCTGCACCTGTTATCATGCCCAGTGATGACAATGCACCAAAAGATGACACTATACCTAAAGATGAAAACATAGCAAAAGATGAGAACAGCCAAAGCAGTGACAGTATATTAACCTATAAAGGAAGTGAAGACTATGATGTAACAGTCACAGAAATGATTGTTATAGAAAGATCTTACTTTGACTATGTCAACCAATTGCTAGCTAGTGTAAATGAGGATGTAGTACCACAGCTTTCCCATATTGACTACGACAAACTTAAATCGGATATGTTAAACAATGTGTCATGTCCCTTGTGTACAACTAAATTGGAAACAGTACAATCATTTTCCACTCATATGAATAAAGTTCATAGTGTGAAAACTGTGCCTTTATATTCCTGTAGAGTTTGTGCGACATTTTTTGACACATACAACGAACTGGCGAATCATACAGCGTGTGAATTCgctgattttgatgatttatgGATATGTCAATTTTGTGACAAAGAATTTGATAATCGTGAAGCAACAAGAGAGCATTTAACAGAACATTGGACATATTTAGACTACGAGAACTGCTTTAGCCCCCACATTGGattcaaatgtaaatattgttccACATTGTTTTGGAATGAAAATGATAGGGAAACTCATCAGTTGAGGGTTCACttccataaatataaagaacatttttataagtgtGACACTTGCGCTAAAACGTTTGGTGATAagGTATGGTACATACATCATTATTTGGAAAAACACTGTGAGGACGAAGACAAAGCGTTCCTCGTCAAATGTTGTCTTTGCTGTAGTGTTCTCGAGAGTGTAGAAGAAATGAGAAGTCATTTTGCGTCAAATCATGCTGAAGTACGAAAGATGTACTGTTCCCTTGAGCCTTGTATGTACAAACCGCTGAGTCATAGGAAGTCCTTTAAGTTACATGTTAAGATGGTACACGGGGCACCAAAACCCGAGAAGGTCGTCCATTGCAACGTCTGCCAGCGTGAGTTCCAAAGTGCGCGCGCGTGCTCCACCCACATGGCCCAAATACATGGCCCTGGCAAGTTTAAGTGTAAACTTTGTAAGGAAGTTCTGCAGACACTTGATGAAAGAAAACTCCACTACCTCCTCTGTCATCCGGGTCGACATCCGTTTGAGTGTGTGGATTGCGGCAAATCGTTCCAGTACAAGTCTTCACTATATATGCACAGACAGGACCACCAGCCCAACAAACAGACATACACTTGCAGTTATTGTGCTAAGACATTTGCGAAGAAGGACTCGTATCGCGAGCACGTCCAAATCCACGAGGGTCCGCGCCACGCGTGCTCCTACTGCCCAATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGGCGGCACACCGGCGAGCGCCCCTACCGCTGTGCCCACTGTCCTCGTGCCTTCGCCGACAAGGGCGCCTGCACCGCGCACACCAGAACGCACTCTAAGGACAGGAGTTACGCCTGTCTGTACTGTGGACAGACGTTTGTACAGAAGTCGAAGCTAACATATCATATTAGAAAACATACTGGAGAAAACCTAGAAGCGTGTCCAGTGTGCTCTAAGCTCTTCACAAGTGCGTGTTCCCTACGCGAGCACATGAAAACACATCTGACGAAGAGACAAATAGTCAAATGTCCGTTGTGCGACAAGGGCTACGCGGACGAGCGCTACATGCTCCGCCACTTACGGACGTCGCACACTCGCTCGCAGTTCAGCTGCCCCATTTGTACGAAGCTGCTAACCAGCGCCGCCGGCCTGCGGCACCACGTGATCACGCACAGCCCTTTGAACACTTTCAGATGCAAATGCTGTCCAAAATCCTACGCAGTGAAACGTACGATCATTAAACATCTGCGTAAACGCCACGGCCTCAAAGGCGGGGATTTGAACCTAAAGGACTTTTACACGCGCCTAGAGCCAAGAGAGTGTCAACTCAAGTTAGACGAAACCACAATGACAACCATATTCGGACCCCCGAAGAAACCCGCACCAGAAGTACTAATTGCTGACTTTGTAACATTCTCCAAGAAAATCTCCTTCGCGCAAAACATAGAGAATAATAATACTGATGACACAGAAGATGATAATGAAGCTAATGATGGCAAAGACAGTGATAATGATCATGAGCGTGATGGTGGTAGCAACAGCGAAACGGAAGAACAGATGCCACGAATCAAACAGGAAGTGGTTAGTGGAGATGAACTAGAGCCCACTGACTTTGTTAGTGTCAAGATTGAGCCCATGGAAGATGATAATGTTGAATAG
Protein Sequence: MVSDESDDEPLSNLAAKKKSGEYDFEPPSSSDEEPKKKKKKKELPAKKLGVTIKLNRKLNSLVGPAVIERPSDVWLYLKDLNPTGPYSCLLCTDWFINRSKMILHYALNHKKDFCGICRYFVPDRSAWFEHEKFHSPWPCSQCVETFSTDVQLRFHLSSIHNLVHCRLCHFRVTADDDYSSHLFQKHNVTNAACQNDEQFWQVDYEGDDKFMCSLCSKPDLLCSTFFAHYMGFHHFTLKCLTHLIAGKNTSFLVEGADVTDRFVNEQLKGHVRLGYVDLTPKTDTPKILKENIVPIEIVLPEVKQEIVSDHEEQNNVPPLTPAPSLTPAPTSAPTLPPTLPPTFPPTPAPVIMPSDDNAPKDDTIPKDENIAKDENSQSSDSILTYKGSEDYDVTVTEMIVIERSYFDYVNQLLASVNEDVVPQLSHIDYDKLKSDMLNNVSCPLCTTKLETVQSFSTHMNKVHSVKTVPLYSCRVCATFFDTYNELANHTACEFADFDDLWICQFCDKEFDNREATREHLTEHWTYLDYENCFSPHIGFKCKYCSTLFWNENDRETHQLRVHFHKYKEHFYKCDTCAKTFGDKVWYIHHYLEKHCEDEDKAFLVKCCLCCSVLESVEEMRSHFASNHAEVRKMYCSLEPCMYKPLSHRKSFKLHVKMVHGAPKPEKVVHCNVCQREFQSARACSTHMAQIHGPGKFKCKLCKEVLQTLDERKLHYLLCHPGRHPFECVDCGKSFQYKSSLYMHRQDHQPNKQTYTCSYCAKTFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCAHCPRAFADKGACTAHTRTHSKDRSYACLYCGQTFVQKSKLTYHIRKHTGENLEACPVCSKLFTSACSLREHMKTHLTKRQIVKCPLCDKGYADERYMLRHLRTSHTRSQFSCPICTKLLTSAAGLRHHVITHSPLNTFRCKCCPKSYAVKRTIIKHLRKRHGLKGGDLNLKDFYTRLEPRECQLKLDETTMTTIFGPPKKPAPEVLIADFVTFSKKISFAQNIENNNTDDTEDDNEANDGKDSDNDHERDGGSNSETEEQMPRIKQEVVSGDELEPTDFVSVKIEPMEDDNVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00777535;
90% Identity: iTF_00779027;
80% Identity: -