Basic Information

Insect: Heliconius nattereri
Gene Symbol: -
Assembly: GCA_013403645.1
Location: JAAIXI010000234.1:3094534-3101184[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.8e-05 0.0046 17.4 2.8 1 23 249 271 249 271 0.99

2 12 0.02 1.4 9.6 1.2 2 23 279 301 278 301 0.89

3 12 0.71 48 4.8 2.5 1 23 305 327 305 327 0.94

4 12 0.006 0.41 11.3 1.5 1 23 332 355 332 355 0.95

5 12 0.00091 0.062 13.9 0.1 3 23 361 382 360 382 0.97

6 12 0.0043 0.29 11.8 0.3 2 20 391 409 390 411 0.94

7 12 0.00017 0.012 16.1 0.0 2 23 423 445 422 445 0.96

8 12 0.0046 0.32 11.7 3.9 3 23 453 474 452 474 0.96

9 12 1.7 1.2e+02 3.6 0.0 10 23 495 508 493 508 0.87

10 12 1.2e-05 0.00082 19.8 1.5 1 23 514 536 514 536 0.99

11 12 7.3e-06 0.0005 20.5 3.3 1 23 542 564 542 564 0.94

12 12 3.3e-06 0.00023 21.6 1.8 1 23 570 593 570 593 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.8e-05	0.0046	17.4	2.8	1	23	249	271	249	271	0.99
2	12	0.02	1.4	9.6	1.2	2	23	279	301	278	301	0.89
3	12	0.71	48	4.8	2.5	1	23	305	327	305	327	0.94
4	12	0.006	0.41	11.3	1.5	1	23	332	355	332	355	0.95
5	12	0.00091	0.062	13.9	0.1	3	23	361	382	360	382	0.97
6	12	0.0043	0.29	11.8	0.3	2	20	391	409	390	411	0.94
7	12	0.00017	0.012	16.1	0.0	2	23	423	445	422	445	0.96
8	12	0.0046	0.32	11.7	3.9	3	23	453	474	452	474	0.96
9	12	1.7	1.2e+02	3.6	0.0	10	23	495	508	493	508	0.87
10	12	1.2e-05	0.00082	19.8	1.5	1	23	514	536	514	536	0.99
11	12	7.3e-06	0.0005	20.5	3.3	1	23	542	564	542	564	0.94
12	12	3.3e-06	0.00023	21.6	1.8	1	23	570	593	570	593	0.98

Sequence Information

Coding Sequence: atgaatgatCAAGTTCTTTGTCGTATTTGCTTCGCTTCGGACAACGTAAAGCTGTGCAGTGTATTCTCTTTTGGTTTAACTGAGGCATATGAAAAGTTTGTTGGTTTAAAGATTACGGAACAAGCCGCTCTTCCTGAGTATATATGTAGCTATTGTACCACATTGCTCTTCAAAGGTTTAGTCTTTCGAGAGAAATGTCTTTCtgcatacaatattataaaatatgcggAACAAAACaatACACCAATAGACCAGGTAGATGAAGCAACAAACTTTAAACTACCATATTccatatcaaataataatccaATCATTAATATAGAGTATGCAGAACCAATACCTATAAAACAAGAACCAGTAAGATATATACCATTCATAGAAGTTAAAATAGAgaattgtgaaattaaaaagaagaaaaaaaagaaaaagaaggaaTCAGTGCAAGTGAAAACAGAAGTGTTTAGTGATGGAACATATGATAATGATAATGCTAATACATCATTTAATGATAcaccaaataataatttgcaaaataatGATGATGAGAAAAAAGATTCTGAGATAAATAATTCACAGATGATGGatgattttcataataatgatTCACAAAGTAATGATACAGGAAATAATGAATTGGTAACACATGAGCTATTGGATgacgtgaaaataataattttgagtcCACAAGAGCAAATACAGGAGATAGAAGATAGAAAAACATCgtctaattatttaaattcgtcATACAAATGTAGTTATTGTTTCAAAGGGTTCATGATGCCATCAACTTTTAGGAATCATATGTTGAAACATGATCCGgAACGAGGTGAATTAAAATGTGACATATGCAAATCGAGGTTTTCCGAACTTCGATCTCTCAGAGCTCACGTAGTTCATACGCAcgaaaggaaatatatttgtaaattgtgTGATCATGTTTCTAGAAGTAGCCACAGGGCGAAAGAGCACGCTAAATGGCACAATGGTTTTACgttttcatgtaaaatatgtGGAGCTACTTTTGCaaaatcaaCGAGTCATCTAACTCACATACGTCTACAACATCCTTCTGAAAACGCTTGTGACATCTGTGGTGAATCCTTTATAGGAGAGTTTGGTCTCAAAATGCACAAGAGGAAGGCTCATaGTTCAGATCCAAATCAACTTACAACGTGTGAAcagtgtaattttaaatttaccaaTGTCGAAGCTTTGTCGAGACATCTAGAATATTCTAAGGACGAAGTATGCCATCCGGAtttaaagCCATGTACACAATGCGGGGAGGGTTTCGTGTCTGAAGAGGCCCTAAGTGAACATATAAAGACCGATCATAAGGACGAAGAAGCTGCTTTTTGTCATGATTGTAAACGTACTTTCACGTCAACACGCTCCTACGAAATACATTTCCAGCGCGTACACCTCGGCGTGAAACTTAAACAGAGGAGGCGAGCTGCGTGCAAACGCGGGGAGAGCGCAGTCTGTGAATCAAATGCAACATTGATATATCATCAAAGGACACACACCGGGGAAAAACCGTACCAATGTACGGAATGTCCAAAAAAGTTTAGCGTATTTCAGAGATTACagATACATCTAAGAACCCACACCGGGGAAACCCCGTATCAATGTACGCATTGTCCCAAAGCGTTTAAACATAAGGCGGCGTTGAATAGACATGATCgcGTACACACAGGAGCTAAACCATACAGCTGTCAGCATTGCGGGAAAGCGTTTTCGCAATCTAATTCCATGAAATTGCATGTTAATACTGTACATTTGAAACTACCCGCACCGTACAGGAATAGACGaccgaaaataaattaa
Protein Sequence: MNDQVLCRICFASDNVKLCSVFSFGLTEAYEKFVGLKITEQAALPEYICSYCTTLLFKGLVFREKCLSAYNIIKYAEQNNTPIDQVDEATNFKLPYSISNNNPIINIEYAEPIPIKQEPVRYIPFIEVKIENCEIKKKKKKKKKESVQVKTEVFSDGTYDNDNANTSFNDTPNNNLQNNDDEKKDSEINNSQMMDDFHNNDSQSNDTGNNELVTHELLDDVKIIILSPQEQIQEIEDRKTSSNYLNSSYKCSYCFKGFMMPSTFRNHMLKHDPERGELKCDICKSRFSELRSLRAHVVHTHERKYICKLCDHVSRSSHRAKEHAKWHNGFTFSCKICGATFAKSTSHLTHIRLQHPSENACDICGESFIGEFGLKMHKRKAHSSDPNQLTTCEQCNFKFTNVEALSRHLEYSKDEVCHPDLKPCTQCGEGFVSEEALSEHIKTDHKDEEAAFCHDCKRTFTSTRSYEIHFQRVHLGVKLKQRRRAACKRGESAVCESNATLIYHQRTHTGEKPYQCTECPKKFSVFQRLQIHLRTHTGETPYQCTHCPKAFKHKAALNRHDRVHTGAKPYSCQHCGKAFSQSNSMKLHVNTVHLKLPAPYRNRRPKIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00779701;
90% Identity: iTF_00782049; iTF_00780458; iTF_00774679; iTF_00775485; iTF_00779701; iTF_00778208;
80% Identity: -