Basic Information

Insect: Heliconius nattereri
Gene Symbol: -
Assembly: GCA_013403645.1
Location: JAAIXI010000218.1:2126898-2130634[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00035 0.024 15.2 5.1 1 23 167 189 167 189 0.98

2 11 9.9e-05 0.0067 16.9 0.7 2 23 231 252 230 252 0.97

3 11 2.5e-06 0.00017 21.9 2.0 3 23 261 281 259 281 0.96

4 11 8e-05 0.0055 17.2 0.5 1 23 287 309 287 309 0.99

5 11 2.1e-06 0.00014 22.2 1.4 1 23 315 337 315 337 0.97

6 11 4.8e-07 3.3e-05 24.2 1.1 1 23 342 364 342 364 0.96

7 11 3.7e-06 0.00025 21.4 0.6 1 23 370 392 370 392 0.98

8 11 1.2e-05 0.00082 19.8 1.3 1 23 398 420 398 420 0.98

9 11 1.2e-05 0.00085 19.7 4.3 1 23 426 448 426 448 0.98

10 11 1.8e-06 0.00012 22.4 0.7 1 23 454 476 454 476 0.98

11 11 0.00022 0.015 15.8 1.7 1 23 482 504 482 504 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00035	0.024	15.2	5.1	1	23	167	189	167	189	0.98
2	11	9.9e-05	0.0067	16.9	0.7	2	23	231	252	230	252	0.97
3	11	2.5e-06	0.00017	21.9	2.0	3	23	261	281	259	281	0.96
4	11	8e-05	0.0055	17.2	0.5	1	23	287	309	287	309	0.99
5	11	2.1e-06	0.00014	22.2	1.4	1	23	315	337	315	337	0.97
6	11	4.8e-07	3.3e-05	24.2	1.1	1	23	342	364	342	364	0.96
7	11	3.7e-06	0.00025	21.4	0.6	1	23	370	392	370	392	0.98
8	11	1.2e-05	0.00082	19.8	1.3	1	23	398	420	398	420	0.98
9	11	1.2e-05	0.00085	19.7	4.3	1	23	426	448	426	448	0.98
10	11	1.8e-06	0.00012	22.4	0.7	1	23	454	476	454	476	0.98
11	11	0.00022	0.015	15.8	1.7	1	23	482	504	482	504	0.97

Sequence Information

Coding Sequence: ATGGAATCtgataaagatttaaaatcttaTGAGAACTGTTGTCGTACGTGTATGAATGAAGATTCTTCtatgtttgatatttttatttgtacattaaATTCTACAAATTTAGCTGATATATTAACAGCATGTACAAGATTAAGTgtGCAAAAGGAAGATgctttaccaaaaaaaatctgtaaattttgccaaaaatgccttttaaatttctataactTTCGGGAAGTTGCAGAAAAAGTTGATACGagattaaaagaaatactCCTCAGTAACAATGATACCAAAATGTCCATTAACATTGATATGGAAAAAGTccataaacttaatattaaagaagaaCAGGATTTTGATggtgataatttttttgagtttgagcccaaaattgaaatgaaacatgaagacattttaatttcaaatatagatgaaaatattaattccgaTAAGTATAGCTCTAACAAACCAAATACAAAGTGCAGAGAGAAAAGTAGTAAAAAGAAGTATAGTTGTAATCACTGTAACAAAACATTCATAAAGCTTACAAGATTACAATATCATCTACAAAGGCACAAAGTTAATGAAGAATGTGTTCCTAGAGATTCAAAGAATGAGGAGCAAACAAaatcattgaaaaataatgacaataatGACACAAATGGTGAAGCAACTGAACAAAGCTTAAATCAAGTTATACAATGCAATATGTGTCcctcaaaatttaaatctataaattcCCTCTCAGCTCATATGAGAAaacatacagaaaaaaatagaataatagcTTGTAGCAAATGTGGCAaagtattcaaaaaaataagccACTTAAAAAGACATGAGAAAATCCATGAAAATAATCGTCAGTATAAATGCACATTGTGTCCTAGAGCATTTCAAAGTGAAGAAACTTTAAAAGGTCATTTGAATAGGCATAATGGAGTCAAGCCACATTCATGTCCCCTATGTCCTAAGTCATTTGCACATTTAACAACATTAACGGCACATATTAAAGTACATCAGAGAGATAAATTCTTATGTCCGACATGCGGTAAGAAATTTGACTCCAGTACAAATTTAGATCAACATATGAGACGTCACTTAGGTTTGAAGCAGTTTGAATGTACAATGTGCCCACGGAAATTTGTAAGTAAAGGAGAATTAAAATCCCACACAATAACTCATACAGGTGAAAAATCCTATACATGTGATCAATGTGGAGCGTCATTTACAAAGAGAACTTCATTAGCGAAACACAAATTGAGACACTTAGGAATAAAACCTTACCAATGTGAAACATGCTCCATGAAATTTTCAAGTAGAGATCATTTAAAACGCCATAATCGTATTCACACTGGTGAAAAACCGTATAAATGCGAGATGTGTGAAAGGGCCTTTACACAAAGTAATGATCTTGTCAAACATCGTAGAGCACATTTGGGCGACAAGATATATAAatGCACAGAATGTACAGAAAGCTTCCGACTTCATATTGAATTAAGACAACATATATCtgaacatttcatttcatctcaACTACAAGCATTGAATGGTCCAAACAAaggaaaagaagaaaaaacatttagtAACGTCAAATTGTCAGATGATATTGAAACACAGATAAATAATGCTGCTAATATAGAAAAgtga
Protein Sequence: MESDKDLKSYENCCRTCMNEDSSMFDIFICTLNSTNLADILTACTRLSVQKEDALPKKICKFCQKCLLNFYNFREVAEKVDTRLKEILLSNNDTKMSINIDMEKVHKLNIKEEQDFDGDNFFEFEPKIEMKHEDILISNIDENINSDKYSSNKPNTKCREKSSKKKYSCNHCNKTFIKLTRLQYHLQRHKVNEECVPRDSKNEEQTKSLKNNDNNDTNGEATEQSLNQVIQCNMCPSKFKSINSLSAHMRKHTEKNRIIACSKCGKVFKKISHLKRHEKIHENNRQYKCTLCPRAFQSEETLKGHLNRHNGVKPHSCPLCPKSFAHLTTLTAHIKVHQRDKFLCPTCGKKFDSSTNLDQHMRRHLGLKQFECTMCPRKFVSKGELKSHTITHTGEKSYTCDQCGASFTKRTSLAKHKLRHLGIKPYQCETCSMKFSSRDHLKRHNRIHTGEKPYKCEMCERAFTQSNDLVKHRRAHLGDKIYKCTECTESFRLHIELRQHISEHFISSQLQALNGPNKGKEEKTFSNVKLSDDIETQINNAANIEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247407;
90% Identity: iTF_00778174;
80% Identity: -