Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_013403645.1
Location
JAAIXI010000237.1:1644883-1648729[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-06 0.0041 17.3 0.0 2 34 332 367 331 373 0.85
2 2 3.3e-10 3.3e-07 30.4 0.2 2 43 412 458 411 460 0.90

Sequence Information

Coding Sequence
atgcgctcgtctattttattattctttacacTCATATTAGGAGCGACAGCGTGGGATGACGATGACTTAGAAATATTCGACGTGGTAGAAGAAGTgaatcaaaatttttatgaattgatAGGAGTAGCAcaggaTGCATTACAATCGgaaatcaaatcagccttCAAAAAGCTTACTCTTAAATTGCACCCCGACAAAAATGATGCTCCTGATGCAGATGTTCAGTTCCGCAATCTTGTatctgtacataatatattaaaagatccAGGAAAACGAGAAAAatatAATGAAGTACTTAAGAATGGTCTTCCAAATTGGCGTTCAGCTGTATACTATTATAGGCATGTTAGAAAGATGGGCTTGGCTGAAGGTTCAATTATACTTTTCATACTGATAACATTTGGACAGTATGCAGTTGGTTGGGCGGCCTATGCAGAAAAGAGGTTTACAGCCgaacaaattttaaacagtAGAGGGAAAAAGCATTCAAAAAAGTCTGGCTTTGATACTGGCTTAGCAGAAATATTAGACAAACTGCCCAAACCAAGTATCAAGGACACATTGCCCTTTCAAATACCGAGGGCTATATGGTGGACTATTACTGCTATACCATTGGGTATTATGGAGTTAAAGAAGAGAAGGAAGGAAATGGAGGAAGAGAcgaaaagaaagaagaaaaaagaagaagaagaagaaaaattgCGTGCAGAACGTGAAGCAGCGGCCGCCGAGAGCCGGGCGGAGGGCAACGCGCGGCGCCGCAGGGCCTTCATACCGCCTGCAAGGGACAAGGATAGGGACGTGCATAGGGATTGCGTACTGGATCCCGTCGCGGGCCTAGAGGGACCCGTGGCTGTGCCTGTTAAACCTgcaCAGTGTGCGACTATGTTTTgggtttctctgcctaccctgctataagcgggatatagcgtagaGCGTAGCTAAATaaaccaataaatataaatttttcaggCCCTCCCACCAATAACTGGTGGTCTCTGGACAGACGATGACTTGGCAGAACTAGTCCGTCTGGTCAAGAAGTACCCCCCAGGGGCGGCTGAGCGGTGGGAGAGGATAGCTGAAGCCATGGCCAGGAGTGTGCCAGAAGTGACTCACATGGCCGCCAAGTTGAAGGAGAACTGCTACAAGATACCTGGCCAAGATCAACCGGAGGAGTTGCCTGAAATGCCTAAGAAAGTAAAAACACGTAAAACAGAGGAGACGAGCGGCGGCAACTGGTCCCAGACGCAGCAGCGCGCGCTGGAGGCGGCGCTCGCGAAGCACCCAAAGGGCGCGCACTCCGACAGGTGGCAGAGGATAGCTAACAACGTACCGGGGAAGACCAAgGAGGAGTGCATGCAAAggtgtaaatatttatcagaGTTACTTAAAAAACAGAAGCAGAAAGAAGACGGTCTTAGCGATGGAGATGCGGTCGCGGATGGCGAACAGAATAACGAAATTATCACTAATGcttaa
Protein Sequence
MRSSILLFFTLILGATAWDDDDLEIFDVVEEVNQNFYELIGVAQDALQSEIKSAFKKLTLKLHPDKNDAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSIILFILITFGQYAVGWAAYAEKRFTAEQILNSRGKKHSKKSGFDTGLAEILDKLPKPSIKDTLPFQIPRAIWWTITAIPLGIMELKKRRKEMEEETKRKKKKEEEEEKLRAEREAAAAESRAEGNARRRRAFIPPARDKDRDVHRDCVLDPVAGLEGPVAVPVKPAQCATMFWVSLPTLL*AGYSVERS*INQ*I*IFQALPPITGGLWTDDDLAELVRLVKKYPPGAAERWERIAEAMARSVPEVTHMAAKLKENCYKIPGQDQPEELPEMPKKVKTRKTEETSGGNWSQTQQRALEAALAKHPKGAHSDRWQRIANNVPGKTKEECMQRCKYLSELLKKQKQKEDGLSDGDAVADGEQNNEIITNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2