Hnat017932.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius nattereri
Gene Symbol
-
Assembly
GCA_013403645.1
Location
JAAIXI010000236.1:14614045-14630400[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-13 3.7e-10 39.4 0.0 1 37 176 213 176 216 0.93

Sequence Information

Coding Sequence
atgaaCGACGACACTAATATAATGATTTCTGAATATTTGTGCAGATGTAAATGTTGTTTAAAtgatatagaattaaaaagcTTGTGGGAAGTATACGAGGGTGATGGCGGTGATGAAATATACGGAAATATGtggGTACCATCTGATGAACCAGAACATATTTGTGAGATgtgtatattgaaattacgaGAAGCACTTGATTTTAAAAGGAACATATTGGCTATTGAAGATATTCTATTAAATGgaatagatataaaagaagaaatagaCACTGAGTCAGATATAACATCATCAACAACACTAGTAAAATATGTTCCAATTAAAGAGGAATATGAGCATGTTGAATATTTGGATTTTGAAGAAATATCTGAAgAAAAACCacaactaaaaattataacacaatTGGCTAATATAAGTTCAGGTCCCTCAACACCAGGGGCCTCGAGTTCAGGGCCTCCCAGCCCGTTACGAAAATGgcctaaaaagaagaaaaaacatGAATTAACTAAATTCTATAAACAATATACCAAAGAAGACTTAGCAGAAGCGATAAGAGTGGTTAGAAACGGTGAAATGAGTTGCGCATACGCGGCTAATAAGTATGGCGTACCGAAGAAAACTTTGACGGTTAAAGTTAACTCACTTAGTGATGCCGATGGCGACGACTCCACCAATAAGcattacaaattaatagaAGAAATCAAAGTCCTTCTGACACACACAACAGCCGTGCCGTTCAAAACAAAAACGACAAGATATTATTGTTTCTACTGTTCTACTGACGGCCCCTGCTTTGAAGACACTGATGAACTTAGAGAACATACTAAAACCAAACACGAACACGAATGGactaaaatagaattatatatgAGACCCCAATGGCTCaatgaagttataaaaatggaTGTCCAAGATAtacattgtaaaatatgtcTAACAATGTTGCCAGATTGGAATAATTTGTTCGTTCATTTGGCAGAAATACATTATTTGGAGTTTGATATGGCGTATACTAAGATTATACCTTACGGTCTAAGTGCTAATTTAAAATGCTTTTTGTGTGGGCAGGATTTTCACAATTTCGGACATTTAGACAGTCATATGAATAAtcattatagtaattatatttgttatgaaTGTGGCGACACCTTTCTTTCAGCAAGTCGTTTGGACAAACACTTGAGTGTACACAAAATTGGTAATTATCCTTGTGAATATTGTGATAAAGTGttcaaattagaaaaatatcgcTCAAAACATGTAAGTTTAGTGCatatacaagaaaatacagTCAAATGTTTGTACTGTCCAGACAAATTCCTAGGTATTTTCCAAAGACATATACATGTGACGGAGAAACATAAAGATAAAGTTAAATACATGACTTGTGAATACTGCGGCAACAGTTATACATGGAAGCCATATTTTTTAGCGCATATGAAAAGAAGGCATGGTTCTGAGAAGAAATATAAGTGTAAACATTGTGAGAAGTGTTTCTTAATGAAGTATGAATTGAAGAACCACATGGTGAGGCATACAGGAGAGAAGAATTTTGTATGTGGCTTATGTGGGCTAGGGTTTACTAGGATGtgGGAGCAGCCATCCAAGGGTGATTACTCTGAGCATATATGTGAGGCGTGTATCACAAGGTTGCATAATGCTGTTAGtttcaaaaaagaaattttactcTCTCAGTTGTTGTTAAAGAAACAGTTAAGATATGAACCACTTGATGAAGTAAAGCAAGAAGAAGAATCTAACACAGACATAGAGACCGAATATCTAAGTATAGAATGTTTTGAGGATGACGACAATGGAAGAGAAAAGAAggaaaagcaACGTTTAGACGAAGGGACCAAACCAAAGAAACGTAAGAATCCAAGTCTACAAAAGTGCCAAGAGAATTTggattgtataataaaatatacagatgCTACTCCTTTCAAGGGATTTCTAAGAATCAGATATTCCTGCCATTTCTGTAAAGAAGATTATGAAAGGCCAagtgatttaaaataa
Protein Sequence
MNDDTNIMISEYLCRCKCCLNDIELKSLWEVYEGDGGDEIYGNMWVPSDEPEHICEMCILKLREALDFKRNILAIEDILLNGIDIKEEIDTESDITSSTTLVKYVPIKEEYEHVEYLDFEEISEEKPQLKIITQLANISSGPSTPGASSSGPPSPLRKWPKKKKKHELTKFYKQYTKEDLAEAIRVVRNGEMSCAYAANKYGVPKKTLTVKVNSLSDADGDDSTNKHYKLIEEIKVLLTHTTAVPFKTKTTRYYCFYCSTDGPCFEDTDELREHTKTKHEHEWTKIELYMRPQWLNEVIKMDVQDIHCKICLTMLPDWNNLFVHLAEIHYLEFDMAYTKIIPYGLSANLKCFLCGQDFHNFGHLDSHMNNHYSNYICYECGDTFLSASRLDKHLSVHKIGNYPCEYCDKVFKLEKYRSKHVSLVHIQENTVKCLYCPDKFLGIFQRHIHVTEKHKDKVKYMTCEYCGNSYTWKPYFLAHMKRRHGSEKKYKCKHCEKCFLMKYELKNHMVRHTGEKNFVCGLCGLGFTRMWEQPSKGDYSEHICEACITRLHNAVSFKKEILLSQLLLKKQLRYEPLDEVKQEEESNTDIETEYLSIECFEDDDNGREKKEKQRLDEGTKPKKRKNPSLQKCQENLDCIIKYTDATPFKGFLRIRYSCHFCKEDYERPSDLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00457174;
90% Identity
iTF_00781437;
80% Identity
iTF_00781437;