Basic Information

Insect: Heliconius melpomene
Gene Symbol: -
Assembly: None
Location: Hmel206001o:12553834-12572734[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5 1.8e+02 3.0 3.4 1 23 271 293 271 293 0.96

2 14 0.52 36 5.2 0.9 1 19 343 361 343 364 0.84

3 14 0.0036 0.25 12.0 0.2 1 23 382 405 382 405 0.94

4 14 1.8 1.2e+02 3.5 3.5 1 19 442 460 442 461 0.93

5 14 9.2 6.4e+02 1.3 1.8 1 23 468 490 468 490 0.79

6 14 0.68 48 4.8 2.9 1 23 1994 2016 1994 2016 0.91

7 14 0.46 32 5.4 0.4 1 23 2021 2043 2021 2043 0.95

8 14 4.5 3.1e+02 2.2 1.7 5 23 2132 2150 2129 2150 0.90

9 14 0.0089 0.62 10.8 0.3 2 23 2166 2187 2165 2187 0.96

10 14 7.9e-07 5.5e-05 23.5 2.9 1 23 2193 2215 2193 2215 0.99

11 14 0.00013 0.0091 16.5 2.0 2 23 2221 2242 2220 2242 0.96

12 14 0.0041 0.29 11.8 2.4 3 22 2250 2269 2248 2272 0.89

13 14 2 1.4e+02 3.3 0.2 1 14 2273 2286 2273 2292 0.79

14 14 0.00056 0.039 14.5 0.1 3 23 2305 2326 2304 2326 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5	1.8e+02	3.0	3.4	1	23	271	293	271	293	0.96
2	14	0.52	36	5.2	0.9	1	19	343	361	343	364	0.84
3	14	0.0036	0.25	12.0	0.2	1	23	382	405	382	405	0.94
4	14	1.8	1.2e+02	3.5	3.5	1	19	442	460	442	461	0.93
5	14	9.2	6.4e+02	1.3	1.8	1	23	468	490	468	490	0.79
6	14	0.68	48	4.8	2.9	1	23	1994	2016	1994	2016	0.91
7	14	0.46	32	5.4	0.4	1	23	2021	2043	2021	2043	0.95
8	14	4.5	3.1e+02	2.2	1.7	5	23	2132	2150	2129	2150	0.90
9	14	0.0089	0.62	10.8	0.3	2	23	2166	2187	2165	2187	0.96
10	14	7.9e-07	5.5e-05	23.5	2.9	1	23	2193	2215	2193	2215	0.99
11	14	0.00013	0.0091	16.5	2.0	2	23	2221	2242	2220	2242	0.96
12	14	0.0041	0.29	11.8	2.4	3	22	2250	2269	2248	2272	0.89
13	14	2	1.4e+02	3.3	0.2	1	14	2273	2286	2273	2292	0.79
14	14	0.00056	0.039	14.5	0.1	3	23	2305	2326	2304	2326	0.94

Sequence Information

Coding Sequence: ATGGATAAAAATAATAAGAAACGAAATAGAAAACCTAAATTAATGCCGCGAAAGTATTCAGATTCGGATGATGAGAGTATTGCTCTTATGCAGCAAGAGATTGAACATGAGCTGGCAAACATAAAAGCTCAGTCAATACTAAGGAAACTGAGTGCAAGTAATTTGACAAATGAAAAAAGTTTTCAATTTTCAGTCAATGTTGAAATTGAGAATAGTGATGATGATGATGATGATGATGATGATAACAATGATGAGCAGAATGATTCATTACCAAATAAAGAGAAAGGAACAACAAGAAATGATTATTCAGAAGTCAATGAGTCTACTTCTATGAAGACAGACAAATATGCTGCAGTAGCAAGTACAAGTAAACAGAAAGAAACAGAAGATTCCTCTATCCAAATAGAAGAAGTAACAGATATTTCAGATGTTGAAGAGAGGTCAGAGGTAAAAGAAGAAATAAAATCAATATGTTCTGATGATGGTGATGTTGATAATGGTGAACTGCTTACTCCAATAAAGCAAACTGATTTTAGGGTAGAATCAGTTAAAACTTTAGTTAAATCTACCAAAGCGATACTTTCTTACAGAATACCAGACAAAATGATATGTGATGAATTTGAATTCGTTTGTAAACAAACAACTCATTATGCTGACAAACAATTAGAAATGCGCCTAAGGAATTATTATGCTAAGGATGTAAGGGGTATATTGAATAACTGTGAAATAGATATAGGTATCCAAGAAGCTTTAAAGAAATGGAAAATATGGCAGATCGCCTTTCCTATAGTCCGTGGGCCGCCAATAATGTACATATGCAGCAAATGCAAGTTGGGATTTTGGCATTTGCATGACTTTCGGGAACACCTCCAAGACCATGCGGATATGAATTTCTCGTTTGTTAGCGAGGAACATCTGAGCTATGTTATAGGCCATCTTGGTAGAAAAGCGGATAAACAGTTCTTGAGTATAGATTCGGACTGCTGGAGATGCGGCAAAGGATTTAAATGCCATAACGATGTTATATTCAAATGCAATGGTTGTAACCGTTACTTCGAAACCTGCCTACTAATGTCTATACATGAGGCCACGTGCGTAGAAAACAAAAATAATTTCGTCCAATCCGAGAATATGGATACACAATATAAATGCCCTGTCTGTCCATACAAATATTTTAGGGAAGAGGATATACAAAGGCACTTGATAGGTTTACACTCGGTTAGATCTGATGTTCCGATATTCTGGTCCACTAAGAAATGCAGGAAATGCGATGGGATTGTCAATCATTCGTCTTTGCACGAGTGTAGCGAAAGACCAGGAATCCACGTATGTAAATTTTGTTTTAGAAGGTTCCAAAGTAAACATAATATTATGATTCATTACTGGTTTTCGCCAAATAATTTTGAATGCCGGATTTGCAAGAAAGTGCTGAAAAAGGAGTGCATGGAGCAAGATCACTTGCTAAGTCATTCCAAAAGTTACACTGCAATGTATAAGTGTTTACTCTGCAAGGATGGTCCATATTTTGTGGACAAGAAGTTGGAACAGCAACATAATTATAACACTCACAATAAGAGGTTCACAACTACTAATTTTGAAAAGGTCATCGTGCCTAAGACCTTATTAAAGAAATTAAAAAATAATAAAAAGTTTATCCGAAAAGAAATGTTGGAGTTTGGTGTGTGGGGTCCCTATTTTTTTGAAGAAGATGGTCAAGTCGTCACAGTTACCTCTGCTCGGTATTGCGACATGCTTGAAACTTTTCTGAAACCGAAATTGGAGGAATTAACGCAGAATCATGACAACGATAACATCTGGTTCCAACAAGATGGTGCTACAGCCCATACATCCAGGCGTTCAATGGAAATCCTGCGACAAATGTTTCCCGGTCATCTCATTTCTTTGCGAGGTGACGTTGGGTGGCCGCCGAGATCACCTGATTTAACCCCCTGCGATTTCTTTCTCTGGGGTTACCTGAAGGAAAAGGTGTACACGCATCGTCCCCGAACCATCGATGAACTGAAGGCTGCAATCACGGAAGAAATCAATGCTATTCCGCTGAATATGACTCGACGAGTAATGGACAACTTCCGGGAAAGGCTTCAGCAGTGTGTGGTCAATGGAGATATACCAAATTCAGATACTAAACTTGAAAGCAATAATTACTCAAATGCTATCAATGATAATATTAGAGTTTTATCAAAATGCGGCGTTCAGTTCCGTCAGCCAACACATAATGTCTCTAAATCAGGCGATAAACGGATAACAGAAAGTATTGCCGATAAGAACCCTCCATCTATCGCAAATAATAAAGACGATAAAACGCCCATTACAAATATTAAACAAGAAATCGAAATCGAAATTAATAATGATACTAAAACAAAACCTAGTGAAATTAAAAGAAAATCTGAAATTCCAATAGAGAATGAGTCGGAAATAAAGAGAATGGCCAATTTGGTTAATATAAAAGAGGAACCAGTGGATTTTCTAGATATTGTTGCAGTAGCAATTGAAACAGATGAGGTTGATGAAACCAATGATGATGATATGAATTTGTTCAATGGAGTTAATGATGAACTAAATTTAGAATTACAAGCACAAGAAGTGAATTTGCCAATTAAATATGAAGTAGATGAAGCTAACTATAAAATAATTGAAAATAATACAATGGATACTGATTTTAGTTTAAGCAATATGGAAGAAAATCATAGTAGTCAAAGAGCTGCTTACAATCACCCTATGGGGAACCAACCTGACGAACCTATGGATATCACGGATCCGCCACTACCTTTAATAAGTAATGTATTTACGGAGGCGTTAGACCCTGCCGCATCTATATCTGTAACGCAACTCGCTGAGCCACCAACTATCTCTTCTTCAAAATCGAAGGCACAGAAACAACGTGAGTACAGACAGCGTATAGCAGCGTTGAGAACTCGAGCACAGGTGATAGCTGTGAGGGAATTGAATGCCGCAAGACAGCGCAAATGCAGACTACGCAAGATTGGAAACTTGGCTCATGTCAGTGGTTTAATAGAATCGACTACTGCATCCTCTTCTCGTTCAGGGGCAGGGTCATTCGAAGTCCAAACTGCTACTGATCGCCAGTTCACACACCAAATAAGTGGAACTTCAGAAGCAAAAACAGGCCAAAACACTGTTCAACCAGGTAAACAACAGGCAAGATCTACCTGGAACTCCAAATGGGCATCCTCGATCATGAGATTCAAATTAATTTTTCTGGACAATGATTTTGGCTACGCTTGTTCGGTTTGCGACAAACTGTGGTTCAAAAACGACCTCAGACCAATCACTACCGCACAACTGGAGGTGATCTCAGAATGGTTCATCAAAGAAAATCGACGACTGTGCAGAGAAGAATATGAAATGGCTTGCAAATCTTGCAGACGTACACTAAACAGAAAATCGATGCCCCTCCTAGCAAAAGTTAATGGATTCTCATATCCAGACCAACCACCAGGCCTACCACCGTTGGATCCCATCAGTGAACGATTAATATCGCCACGTCTACCTTTTAAGCAAGTGCGTCGTCTGCGCAATGATTTCTCTTATGGGATCACAGCACAAGTGATCAACGTACCGGTAGAAGTTCATGAGATGGCAAAATATTTGCCGCGCCAACTAAATGAGGACGACGTCATTAATGTTAACGTCAGGCGAAACCTTGCCCACAAATCGACTTATATCAGCGGATACATGTCCAAAAGTACAATCAGTGCTTGGCTAACTGTACTGCAGAAATCTTCATTATATAGAATGTACGAGATCAACGTGGATTTGTCAAGACTACATCCTAATGTACTGTATTTCGATGATATACAAGATGATCCGTCCGACCGTATTGAAAATATCTCTGCTGAAAACATGCTGGAATCTGAAATTCTCGCTTCAAGACAACATACCATGACGTGGAACGAAGAAGATTATTTCAATATCACCCCAAGATATCAGGCAACATCTCTCAAAACCTTTTTTGACCATCATGCAGAAGAGTTGTCGTTTCCAGCAATATATTTCGGAGAGCCACGCCGATACAAGATGGGAGCAGTAACACCTTACATGATAGCGACGAGTGAGATACGACGCCGTGACAGACGCGGAGCCACACCTCAAAAAATCTTGTATGTTGCAATGAAAGTATTGCGGCTGCGTATTGTGGATAGACTTTACAGCAAGTCTCGCAGTATTTTGGGCACAGAGAATGTTACACGATGTATGTTAGAGGATACAGAATTTCTGAAAGAATTTGTCATACAAAACCTCACATTCATGAAGACAACTCGCAAACGAGACCTCTTTGCAATAATTCGTCAACTTGGTAAACCAACCTTCTTCCTCTCTATAAGTGCTAACGAAATACACTGGATGAAACTGCTCACTATACTTCTCAAACTGAGCAAAAAATATCCAGGAAAAACGGCAGAAGATCTCAACATTTCTGAGCGCTGTACTTTAGTGAGTGACGATCCTGTTACGTGCTGCATATATTTCTACAGACTTGTTGATTCCTTGATGAAAATGCTGCAATCCAAAGTGTCTTACAATCCGTTCGATCGGTATTTCGTTAAAGATTACTTCCTTCATATTGAGTTTGAACATCAAGGAAGCCCACACGCACATATTTTATTGTGGTTGAACGACGACCCACGTGAGGCCGTGTCGGAAAATATGCCAAAAACCATCGCTCTCGTGGAAGAATTAAGTTCGGTTGCTAGAGATGATGTGCCAAACAATTCTGTATACGTCAATCAGATACACAGACATACTAACACTTGCATAAAGCAAGGCGACACAACTTGCAGATTTGGGATCCCGTACTGGCCTATGCTCACGACCCGTGTACTGGTTCCGATACCTGAATCTGATGAACGCCGCCAAATGCTGCGACAGAAGGCCAAGGAGCTGCGTACGTCTCTCGGTGAACATCAATACGCATGCATGGATGAGTTTCTTAATGCTAATGGTTTGACTTACGTGTCATACCTCGACATTCTACGTTCAACGTTGCAAAGACCGACTGTGATGTTCAGACGAAACTTTGACGAACTTATGACAAAGACATTCAATCCGTACCTTGCCGGCGAAGTCAACTCTAGCATAGACATTCAGTTCATCTTGGATGAGTACAGCTGCGCAGAGTATGTGGTAAAATATATAAATAAAACAGGCCGTGGAATGAGTAACCTACGTCGTGAGCTTACTACGATGATGCAAGAGCATCCCGATCGTGACTACACAAGCCAATTGAAAGCGTTGAGTATCAAACTGCTTAGTGCAGTTGAGATGTCAGCGCAAGAAGCAGCATGGTATCTACTACGCCAACCAATGAGTGAGACAAGTTGTCAAGTTGTGTACATCCCGACGGTGTGGCCGACAGAAAGACAGTGCCGCCGCAAGCGTCGTCAAAAAATAGAACAAGAAGGTGTCGATGGAGACAGTACTGATGTTTGGACCATAAACGTCATACAGCGATATGAAGAACGGCCCGCGTCCTTAGAACAAGTTTATTTGGCTGAGTTTGCTTCGTGGTATGCTCACGGTAATGATTTCGTTGATGAAGAAGACGACGTGCACGTGGATGACGATGAAGATTTGGAAGGTGTACCTGAATCTAGAACTTCGCGAGCACCTAAAGAATATCGCCGACGACAGGTCGGACGAGTCATACGATACAGACGCTACAATATTAATGAAACTATTAATTATAAACGAGAGATGGTTCTACTTTATGTACAGTTTCGCAACGAAATGTCAGAGATTGTTGATCAAAATAATTTTTTGCAATTATTTGACGACAACAAAGACATGATTATGGAACGCCGTGACCTATACGAGACGAATTTGAACATTGAAAACGTTGTGAACGACCTTGAAGCTGTTGCTGATTGTGCAAACCGAAGCAAACCCGAAAAAGTACTAAAAACATATATAAAAACGATACACAACGATAGATATCCATACCGTTGCTCGAAATGCAAGCGTGTGTATCAGTCTTTTAAAGAGTATCTCAACCATTTTGTTTTGCACGGTTACAACATTTACGCGTGCCCGCAGTGTCCTGCGGAGTTCCCGAATGTTGAACTACTGTGTTGCCATGTCAATATGCATATTAAACATAATTATGTGAGTGTAGTTTCGATTCATAATGAAAGTACGACAGAGAAAAGTATTAGAAAGTTTCAATGCAAGATTTGTCAGGAAATTTTAGTTGTTACCGAGTTTTTCACGCATTGGGAGAAACACTTAATGGTGCAGGAGAAAGCTCAACAGCGTGGTAGCGCAGTTGATATGGATGGGAAGCCGTTTTTGAGGGACATGATTATTTATATGCAACAACCAGAAAAACACACATTCAAATCCAAAACATGCATACAATGTAAGAAAAAGTTTCTTAGAATAAACGATTTTAAAAGACACATCATACAACATCTCCTCGACGATGCCTATGCAGAACTAATGAATTATGGAAATTTAACGTGTCAGATATGTGGGGCTGGATTCCAAACTGAGGATAGATATAAACGCCATGTGAGAGACCACGCGTCTCTTCCTGTATACAAATGTGAAATGTGCGACAAAACCTTCAGCGACTCCTCAAACTTCTCCAAACACAAGAAAGTGCACAATCTGCACGTCTTAATATGTGATATTTGTGGGAAGAAGTTCCAGAATAAGACGTGTTTGATTAAACATTTAAATTTACACGCAACGATGAAACCGATTGATTGTGAGAAATGTAAGAAAATTTTTTATTCACAATCGGCTTACAAAAAACATTTCAAAAAGCGCACGCACTTTACATGTCCGATTTGCAGATTGCCGTTTAACAGTATTAAAAAGAGATCGGATCACCTGTGGGAGGTACATAAAAAAAGGAACTGTCAAGCGGACTGTCCGATATGCGGCGCCAGCTACAGAAAGAAGACTGACGTGAAGAGACACATGGCGGAGGTGCACGGAGAACAGTCACTCACGCACTACTACGGATGA
Protein Sequence: MDKNNKKRNRKPKLMPRKYSDSDDESIALMQQEIEHELANIKAQSILRKLSASNLTNEKSFQFSVNVEIENSDDDDDDDDDNNDEQNDSLPNKEKGTTRNDYSEVNESTSMKTDKYAAVASTSKQKETEDSSIQIEEVTDISDVEERSEVKEEIKSICSDDGDVDNGELLTPIKQTDFRVESVKTLVKSTKAILSYRIPDKMICDEFEFVCKQTTHYADKQLEMRLRNYYAKDVRGILNNCEIDIGIQEALKKWKIWQIAFPIVRGPPIMYICSKCKLGFWHLHDFREHLQDHADMNFSFVSEEHLSYVIGHLGRKADKQFLSIDSDCWRCGKGFKCHNDVIFKCNGCNRYFETCLLMSIHEATCVENKNNFVQSENMDTQYKCPVCPYKYFREEDIQRHLIGLHSVRSDVPIFWSTKKCRKCDGIVNHSSLHECSERPGIHVCKFCFRRFQSKHNIMIHYWFSPNNFECRICKKVLKKECMEQDHLLSHSKSYTAMYKCLLCKDGPYFVDKKLEQQHNYNTHNKRFTTTNFEKVIVPKTLLKKLKNNKKFIRKEMLEFGVWGPYFFEEDGQVVTVTSARYCDMLETFLKPKLEELTQNHDNDNIWFQQDGATAHTSRRSMEILRQMFPGHLISLRGDVGWPPRSPDLTPCDFFLWGYLKEKVYTHRPRTIDELKAAITEEINAIPLNMTRRVMDNFRERLQQCVVNGDIPNSDTKLESNNYSNAINDNIRVLSKCGVQFRQPTHNVSKSGDKRITESIADKNPPSIANNKDDKTPITNIKQEIEIEINNDTKTKPSEIKRKSEIPIENESEIKRMANLVNIKEEPVDFLDIVAVAIETDEVDETNDDDMNLFNGVNDELNLELQAQEVNLPIKYEVDEANYKIIENNTMDTDFSLSNMEENHSSQRAAYNHPMGNQPDEPMDITDPPLPLISNVFTEALDPAASISVTQLAEPPTISSSKSKAQKQREYRQRIAALRTRAQVIAVRELNAARQRKCRLRKIGNLAHVSGLIESTTASSSRSGAGSFEVQTATDRQFTHQISGTSEAKTGQNTVQPGKQQARSTWNSKWASSIMRFKLIFLDNDFGYACSVCDKLWFKNDLRPITTAQLEVISEWFIKENRRLCREEYEMACKSCRRTLNRKSMPLLAKVNGFSYPDQPPGLPPLDPISERLISPRLPFKQVRRLRNDFSYGITAQVINVPVEVHEMAKYLPRQLNEDDVINVNVRRNLAHKSTYISGYMSKSTISAWLTVLQKSSLYRMYEINVDLSRLHPNVLYFDDIQDDPSDRIENISAENMLESEILASRQHTMTWNEEDYFNITPRYQATSLKTFFDHHAEELSFPAIYFGEPRRYKMGAVTPYMIATSEIRRRDRRGATPQKILYVAMKVLRLRIVDRLYSKSRSILGTENVTRCMLEDTEFLKEFVIQNLTFMKTTRKRDLFAIIRQLGKPTFFLSISANEIHWMKLLTILLKLSKKYPGKTAEDLNISERCTLVSDDPVTCCIYFYRLVDSLMKMLQSKVSYNPFDRYFVKDYFLHIEFEHQGSPHAHILLWLNDDPREAVSENMPKTIALVEELSSVARDDVPNNSVYVNQIHRHTNTCIKQGDTTCRFGIPYWPMLTTRVLVPIPESDERRQMLRQKAKELRTSLGEHQYACMDEFLNANGLTYVSYLDILRSTLQRPTVMFRRNFDELMTKTFNPYLAGEVNSSIDIQFILDEYSCAEYVVKYINKTGRGMSNLRRELTTMMQEHPDRDYTSQLKALSIKLLSAVEMSAQEAAWYLLRQPMSETSCQVVYIPTVWPTERQCRRKRRQKIEQEGVDGDSTDVWTINVIQRYEERPASLEQVYLAEFASWYAHGNDFVDEEDDVHVDDDEDLEGVPESRTSRAPKEYRRRQVGRVIRYRRYNINETINYKREMVLLYVQFRNEMSEIVDQNNFLQLFDDNKDMIMERRDLYETNLNIENVVNDLEAVADCANRSKPEKVLKTYIKTIHNDRYPYRCSKCKRVYQSFKEYLNHFVLHGYNIYACPQCPAEFPNVELLCCHVNMHIKHNYVSVVSIHNESTTEKSIRKFQCKICQEILVVTEFFTHWEKHLMVQEKAQQRGSAVDMDGKPFLRDMIIYMQQPEKHTFKSKTCIQCKKKFLRINDFKRHIIQHLLDDAYAELMNYGNLTCQICGAGFQTEDRYKRHVRDHASLPVYKCEMCDKTFSDSSNFSKHKKVHNLHVLICDICGKKFQNKTCLIKHLNLHATMKPIDCEKCKKIFYSQSAYKKHFKKRTHFTCPICRLPFNSIKKRSDHLWEVHKKRNCQADCPICGASYRKKTDVKRHMAEVHGEQSLTHYYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -