Basic Information

Insect: Heliconius melpomene
Gene Symbol: -
Assembly: None
Location: Hmel206001o:11291623-11302047[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.22 16 6.3 0.4 2 23 297 318 296 318 0.95

2 10 0.17 12 6.7 0.8 2 23 324 346 323 346 0.93

3 10 3.5 2.4e+02 2.6 5.9 5 23 353 372 350 372 0.95

4 10 0.00069 0.048 14.2 4.0 1 23 375 398 375 398 0.97

5 10 1.8e-05 0.0012 19.3 0.6 2 20 402 420 401 424 0.92

6 10 0.01 0.72 10.5 0.7 2 22 436 456 435 460 0.92

7 10 6.4e-05 0.0045 17.5 0.4 1 23 468 491 468 491 0.95

8 10 0.00018 0.012 16.1 1.3 1 23 497 520 497 520 0.96

9 10 2.7e-06 0.00019 21.8 2.3 2 23 530 551 529 551 0.97

10 10 0.0036 0.25 12.0 5.2 1 23 557 579 557 580 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.22	16	6.3	0.4	2	23	297	318	296	318	0.95
2	10	0.17	12	6.7	0.8	2	23	324	346	323	346	0.93
3	10	3.5	2.4e+02	2.6	5.9	5	23	353	372	350	372	0.95
4	10	0.00069	0.048	14.2	4.0	1	23	375	398	375	398	0.97
5	10	1.8e-05	0.0012	19.3	0.6	2	20	402	420	401	424	0.92
6	10	0.01	0.72	10.5	0.7	2	22	436	456	435	460	0.92
7	10	6.4e-05	0.0045	17.5	0.4	1	23	468	491	468	491	0.95
8	10	0.00018	0.012	16.1	1.3	1	23	497	520	497	520	0.96
9	10	2.7e-06	0.00019	21.8	2.3	2	23	530	551	529	551	0.97
10	10	0.0036	0.25	12.0	5.2	1	23	557	579	557	580	0.96

Sequence Information

Coding Sequence: ATGGAAACTAATACACTAAAATTCGAATTGGATAATATTTGTAGGGGTTGTTTAAGCGCTGATAGAAATCTAAAGCCACTATCAAAAGATTGTGCGGTATTTTTTTTACATATATTGGGAACAGAAAATATTGTACCAGAGGATTCAATATATTTTAATTTATTACTATGTTGGGAGTGCACTTTTGCATTAAGAAAAATTTTAAAATATCAAAAAAGATTTAAAAGATCTCAAATAGTGTTTCTAAGAGAATGGGTAGGTCCATTCTCTGTAGAAAGCTTATCTGTATTAACAACTTTCAAGAAAACTAATTATGATACAAGTCTCATATATGACACAGAAGAAATTAAAGATACTAAAATAGATATAAATATAGACAAAACTGAATTTGAAATAAAAGATGAAAAAACTTATCACATTACTATAAAGGAAGAAATTACTAATGATTTTGCTGGTGATATTTCTAAAAATAATGATTCTGATGATTTTGTCGATGATATTCCTAAAAATAATGATTCTGATGATTTTGACGATGATATTCCTAAAAATAAAGACTCTGATGATTTTGACGATGATATTCCTAAAAATAAAGACTCTGATGTTTTTGTTGATATTTTTAAAGAAAAAGAGGTACAAAAAGAGAAAAAGTATTATTCTCGGGGGCAATGTAAAAAAACTATGAAATGTTCACAAGTTAATTACGATACGGGTATAGACAGACATATAGAGAGTGTTGAATTGAAAATTGAACATATTAAAGATATAACAAGTAAAGGAAAAAATAAAACTAAGGATAGTATGTTGGCTAAAATGTTTATAGCGACGAAAGAAATTATAAATACAATGAATTCAGATTTGAAACAAGATGAGACAAACGCAAATGGCGTAAAATGTTCGCATTGTGAAATGTACGTACCAAATCTAAATTTGTTAAAAGAACACTGGAGCGAACACACTTTAAATGCTATTAAATGTATATACTGCGATAGAATGTCAATTTATAATACCGAAATGTTTAAACATTTGAAAAGCTCTCATAAATACAGTTTTAAATGCGAATGTGGTTATGTATGTCGACACCGAAAGACTTATTTTCTGCATTTTAGAAAGTATCATTCAGAGTTTGTGTGTGATCATTGTACGAGTCGATTTAATAAAAAGGAGAATATAGAGAAACATATGAGGCAAAAGCATTTGCCCAACAAATGTGAGTTATGCGGTCGTGTATATTCAAGAAAAAGTAGTCTTCAGGCCCACTATTGGACATTTCACAAAGAATTCAATGGGCAGACCAGTGAACTGACATACTGTGTGGAATGCGACATGCAGTTTGAGAATCACTTCTTGTATAATAGACATTTGAAGACGGTTGTTGCTCATAAGCGGAGAACGCCTAAAAAGTTTCCGTGTTCTGACTGCGGTAAAATTTTCACTAAAAACATTTATATGGTTAAACATTATAATTTAGTCCACAAAAAAAAGACTGACTTTTACTGTGAAATATGTGATAAATATTTTTCATCCGCATTTTCTGTCCAAACTCATACAAAGTATGTTCATTTGAAAGAAGAGAAGATGAGAGATAAAATGTGCCAAATATGCGGCAAATATTTCTTTACAAACTCAGGGTTAAAAAAACATACAAGAACTCATACGGGAGAAAGGCCATACAAATGCAGATATTGCGATTCGACATTCACTCAGGGAAGTTCCAGACGTACACACGAAAGAACACATCATAAGAATGTTGAATAA
Protein Sequence: METNTLKFELDNICRGCLSADRNLKPLSKDCAVFFLHILGTENIVPEDSIYFNLLLCWECTFALRKILKYQKRFKRSQIVFLREWVGPFSVESLSVLTTFKKTNYDTSLIYDTEEIKDTKIDINIDKTEFEIKDEKTYHITIKEEITNDFAGDISKNNDSDDFVDDIPKNNDSDDFDDDIPKNKDSDDFDDDIPKNKDSDVFVDIFKEKEVQKEKKYYSRGQCKKTMKCSQVNYDTGIDRHIESVELKIEHIKDITSKGKNKTKDSMLAKMFIATKEIINTMNSDLKQDETNANGVKCSHCEMYVPNLNLLKEHWSEHTLNAIKCIYCDRMSIYNTEMFKHLKSSHKYSFKCECGYVCRHRKTYFLHFRKYHSEFVCDHCTSRFNKKENIEKHMRQKHLPNKCELCGRVYSRKSSLQAHYWTFHKEFNGQTSELTYCVECDMQFENHFLYNRHLKTVVAHKRRTPKKFPCSDCGKIFTKNIYMVKHYNLVHKKKTDFYCEICDKYFSSAFSVQTHTKYVHLKEEKMRDKMCQICGKYFFTNSGLKKHTRTHTGERPYKCRYCDSTFTQGSSRRTHERTHHKNVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00781323; iTF_00782150;
90% Identity: iTF_00782150;
80% Identity: -