Hmel018568.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius melpomene
Gene Symbol
-
Assembly
None
Location
Hmel217001o:14321541-14329133[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 51 0.056 3.9 8.2 0.9 2 23 60 81 59 81 0.95
2 51 0.033 2.3 9.0 0.0 2 23 109 131 108 131 0.94
3 51 0.074 5.2 7.9 0.6 2 23 152 174 151 174 0.93
4 51 0.00062 0.043 14.4 1.3 3 23 181 202 179 202 0.95
5 51 0.0061 0.42 11.3 3.0 1 23 206 229 206 229 0.96
6 51 0.00046 0.032 14.8 2.0 1 23 330 353 330 353 0.93
7 51 0.14 9.6 7.0 0.2 2 23 381 403 380 403 0.94
8 51 7.5e-05 0.0052 17.3 0.5 1 23 425 448 425 448 0.93
9 51 5.8e-05 0.0041 17.6 2.8 3 23 455 475 454 476 0.94
10 51 0.00015 0.01 16.4 1.7 1 23 482 505 482 505 0.95
11 51 2.4e-05 0.0016 18.9 1.6 1 23 510 533 510 533 0.96
12 51 0.085 5.9 7.7 4.4 1 23 537 560 537 560 0.96
13 51 0.13 9.2 7.1 3.1 2 23 567 588 566 588 0.96
14 51 0.46 32 5.4 0.3 1 23 636 658 636 658 0.94
15 51 0.15 10 6.9 0.2 3 23 687 708 686 709 0.95
16 51 0.0062 0.43 11.3 0.2 2 23 729 751 728 751 0.95
17 51 0.048 3.3 8.4 3.6 3 23 758 779 756 779 0.96
18 51 0.38 27 5.6 2.7 1 23 783 806 783 806 0.96
19 51 0.58 40 5.0 0.6 1 20 836 855 836 857 0.95
20 51 0.018 1.3 9.8 1.9 1 23 904 927 904 927 0.94
21 51 2 1.4e+02 3.4 1.6 2 23 955 977 954 977 0.93
22 51 0.1 7.2 7.4 0.3 1 23 999 1022 999 1022 0.92
23 51 8.8e-05 0.0062 17.0 1.6 3 23 1029 1049 1028 1050 0.94
24 51 0.00042 0.029 14.9 1.2 1 23 1055 1078 1055 1078 0.95
25 51 0.0052 0.36 11.5 2.9 2 23 1084 1106 1083 1106 0.92
26 51 0.0075 0.53 11.0 0.8 1 20 1110 1129 1110 1131 0.95
27 51 0.014 0.96 10.2 2.3 1 23 1164 1186 1164 1186 0.97
28 51 0.0064 0.45 11.2 0.7 2 23 1257 1279 1256 1279 0.95
29 51 3.7e-05 0.0026 18.2 0.4 3 23 1286 1307 1284 1307 0.96
30 51 0.13 9.1 7.1 0.8 1 23 1312 1335 1312 1335 0.95
31 51 0.021 1.5 9.6 4.3 2 21 1338 1357 1338 1360 0.95
32 51 0.035 2.5 8.9 1.8 3 21 1365 1383 1363 1384 0.93
33 51 0.0054 0.38 11.4 0.4 1 23 1435 1458 1435 1458 0.92
34 51 1.6 1.1e+02 3.7 0.1 2 23 1486 1508 1485 1508 0.95
35 51 0.0002 0.014 15.9 0.1 2 23 1531 1553 1530 1553 0.96
36 51 9.9e-05 0.0069 16.9 0.2 3 23 1560 1581 1559 1581 0.94
37 51 0.091 6.3 7.6 3.0 2 23 1586 1608 1585 1608 0.93
38 51 0.016 1.1 10.0 5.0 1 23 1613 1636 1613 1636 0.97
39 51 1e-05 0.00072 20.0 5.0 1 23 1640 1663 1640 1663 0.97
40 51 0.00067 0.046 14.3 0.3 2 23 1670 1691 1669 1691 0.96
41 51 7 4.9e+02 1.6 0.9 1 11 1697 1707 1697 1711 0.84
42 51 1.4 97 3.8 0.1 1 23 1748 1771 1748 1771 0.93
43 51 0.0011 0.079 13.6 0.0 2 23 1802 1824 1801 1824 0.94
44 51 0.0025 0.18 12.5 1.0 2 23 1847 1868 1847 1869 0.95
45 51 0.0063 0.44 11.2 1.5 1 23 1874 1897 1874 1897 0.95
46 51 0.025 1.8 9.3 0.3 1 23 1902 1925 1902 1925 0.94
47 51 0.0093 0.64 10.7 1.0 2 23 1931 1953 1930 1953 0.91
48 51 0.00043 0.03 14.9 0.1 2 23 1961 1983 1960 1983 0.97
49 51 0.054 3.8 8.3 0.1 2 23 1990 2011 1989 2011 0.96
50 51 0.00012 0.0085 16.6 3.8 1 23 2017 2039 2017 2039 0.96
51 51 4.9e-06 0.00034 21.0 3.7 1 23 2044 2067 2044 2067 0.97

Sequence Information

Coding Sequence
ATGTTTAGGCTAATTGATCATTTATACGTCTTTAAGGGTACATTTTACAACCCGGAAAATTTATTTTCAGATATAATACCATCAAAGGTGCCTAATTCTAATACATTGAGGCGGCGAAATCTTCTTATTTTGTTCAACAACACATCCATAATTCCTTTCAAGTATCGGGGGAAATGTAGGTGCTTTTATTGCGGAGAGGAATTGCCCGAATATGCTGATTTGCGTAAACACACTAAAGCCCACGGTCCGTGCTTCGAAAACGATCGTGCTATACGATTAGTTAAAACTGATGACGCAGAAGTAAAAGTTGATATATCAAATATTGTTTGTGAAATATGCAACGAACCTTTTGCTACTTTTGATGAAATAATATCTCATTTGATTATAAAACACTCATTTTGTTACGACAAAGACGTCAAACTTACAATAATGACATACCGTCTTATAGATTTACAGTGTCTTTTATGCGATCAGAAGTTTAATCAAGTCAATGAATTAGTTGCACACGCTAATCATAAACATCCAATTCAAAGTCTAGATTGTCAAATTTGTCATCAAAAATTTATCAGAAAACCATATTTAGATGCTCACATGAGACTAAAACATAAGAATAACTACAAATGTTTAAAATGCTCCCAAATGTTTATATCGCACTCCGCTCTTCAGGAACATAAAAGCAAATCGCATGTTGCTGTTTGTAACATTTGTTTTCTGAAATTCTCTTGTCAAAAGAAAAGATTAAAGCATATGAAATTAGAGCACGCGAATGAACCGCTCAAATGTGGCTTCTGTCTCAAATCTATGAACACAAAGTTAGGATTTTTAAGACACGCCGCTAAATGTACAGAACACGGCATGAATGGAGACGATATTTATATAATAGACGATGACGATGACAAGAAACCAGCTGTAATTCAAATCAGAAATAATATTGCCTGCATACTTAACATGTCTACAGCTATACCTTTTAAATATTTTATGAATAGATTTAGATGTTTCTACTGCCCAAAAAATTTCACGGATTGTGAAGAGCTTAAAGAACACACAGTAATAGAACATCCCGTTTGTGATATTGATTTTAAATGCATGAGATTACGAAACAGACAGGAAGGGTGTGTTAAAATTGATATATCAACGCTTTCTTGTAAAATGTGTTATAAAAAAATATCTAATGTAGAGTCTTTAATTGATCACTTGATTTCTGAGCACAAAGTTTTTTACGATAGATCCATAGACAGTAATATGCAATCTTACAAGTTAATAAAAAATAATTATCCCTGTCCGATTTGTAAGGAAGTTTATACACACTTCAGTACGCTATTGAGGCATATGGGCCAAATCCATACGGATAATAATAATATTTGTATGCATTGTGGAAAATCATTTCGAAATTTGCCAAATTTAAGAGTACACATTTCCAACCATCATAAAACAACGGGCACGTATAAATGTAATCGATGTGACCAAGAATTTTCCTCGAACAAGTATTTGCAAACGCATTTGGGTCGCTTACACGCAGTCAAAGTGTTTGAATGTCCGAAGTGTAAAGAAAAATTCACATCAAACTACACAATGCAAAGGCACATGATTAATATGCATAGTACGGGACATAAGTGCGCATACTGCGGTAAACTGTTCACCTCCAATTGTTTTATGTTAGATCACGTGAAACGCATTCACTTGAAAGAAAGAAACGTCGAGTGTCATATCTGCTATGAGAATTTCTTTGATATTCAATGTTTAAAAACTCATATGGTTAAGCACAACGGTGCGAGAAACTTTCATTGTGATGTTTGTGATGAAAACATCCCATCCAAGTTACATAGTGCCAATAGATTAAGAAGGTTAAATCTAAAAATATTATTTAACAATACCTCAATATTACCATTTAAATGGCGTGGTAAATACATGTGCTTTTACTGTGGGGAAACCCCAAAAACATATGAGAAGTTAGTAGTTCACACTGAAGAACATGGACAATGTTCAGAAAAAGATCGAGCATTACAGTTAATAAAGGCGGCAGATGTTGAAGTGAAAGTTGATACGTCTAATATACTATGTAAGCTGTGTAAAGAATCCTTTGCGGACTTAGAAGCAATTGTAAATCACTTAGTTACAATACATCATTTACTTTATAATAAAAATGTAAAACTATCGATTATTCCGTATCGGTTATTCGATTTAAAATGCCTTTGGTGCGATGAAAAATTTACTTATTTAGGTAAATTAATAAGTCATGTTAACATTAGACATCCTAGTCAAAGCATATTTTGCCCCAAATGTAAACAAAAATTTAATAAAAAAAGAGATTTCGATACTCACAATCGTACTAAACATAGAACTGAGTATATTTGTTTGAAATGTTCTTGTAACTTCCTAACAAGTTCTGATCTTTTAAACCATAAACGAAATTGGCATCCGTCTAGGTGTAACATTTGCTTAAAATCATTTTTGTCATTTAATAAGTGCTTAGAGCATATTGAAAACGATCATGTAAGTACAGAATATACATGTGGTTTTTGTTACTATTCTACTACAGTGAAGAAATCTTTTGTAAAACACGTAATAGAATGCACAGAAAGCATTGAGATGCCCACACACGACATACAAATCATAAACAAAAGTCCAAAAGTGAAGCAAATTAGATATAACATGTCATGTATTTTTAACATGTCTACAGCGATGCCGTTTAAATATTTTATGAGCAGATTTAGGTGTTTTTATTGCCCAAAAGACTTTCAGGAGTGTGATGATCTCAAAGAACACACAATATTAGAGCATCCGTTATGTGATACAAAATTAAAATCTATGAAATTACGCCATAGACAAGATGGCTTAATAAAAGTGGACATTTCGACACTGTCCTGCAAAATATGTTTTCAAAAGTTACAAGATTTAAATACATTGATACATCATTTGAATTTTGAACATAAAATACAGTGTGATAGTTCTGCTACTGTTAACTTGCAGGCATACAAATTAATAAAAGATAATTTCCCATGTCCAGTTTGCTTGGAAGTATTTCGTTATTTTCGAACATTATTGTACCACGTCGGTAAAAGTCACTCTGATAATAAAAATATATGTGTACATTGTGGACTAGCTTTTCGAAATTCACCCAATTTACGCGCACATATAACTCGTCATCATAAATTGGCCAGCTTTAAATGCTCGGAATGCGATATGCGATTTTTTACAAATAATTACTTGCAATCACATTTAGGTCGAGCACACGGCACTAAAATAGTGAAGTGCCACGAATGTAAAGAAAGATTTAAATCTACCTACGAAATGCAAAGGCATAAAATAGAAACACATGGTTCTGGACACGAATGTTCTTATTGTCACAAATTATTCACTGGGAAGTCAGCAGTTAACAATCACATAGATGAAGTCCCGTACGACGTCTGCCCCTCTGAGCGCAGACGAAAAAACTTGCAAATACTGTTCAACAACACAACAATAATACCTTTTAAATGGCGGGGGAGGTATATTTGCTTTTATTGCGGTCAAAATTATAATGAATACCAATCGTTCAGAAAACATACGAGAGCTCACGGTCTTTGTAGTACAAGTGATCATGCCTTGAAGCTTATTAAAGGAAGTCATATAGAAATTAAGATAGACGTTTCAGAGATAGCATGTGAAATTTGTTACCAGCCTTTAACTAGTATTGATGAAGTTGTAGTACATTTGATAAATAAACACGAGTTAGAATACGATAGAAGTATAGATATACCTATACAGGAGTATCAGCTTTCAGATTGTCGGTGTCGAATATGTGGTCAAGAATTTCCTTATTTTGGCTACTTAATACAACATACTAATATAGTCCATCCCCAAAATACCGTTATTTGTGATAATTGTGGTGAAAAATTCAACAAAAAACGAGATCTGGCCATTCATATGAGACGCTATCACCAAGAAGGTGGATACCCTTGTGATGAGTGTCCAGATTTTTTTGAATCCTACACACTTTTAAGTAAACATAAGAATAATTTTCACTTTAGAAGATGCAAAATATGTCATTTACGCTTTCCGTCCTACACTCTTTTAAGGAGACATATAAAATGTGATCATTCTGAGGATAACTGTCCGTATTGCTCAAAAAAATGTCAAACTTCTCAAGGACTTAAACAGCACATTACAAAGTGCAGTAAAAGATGTCATGTAAAAGTAAAACAAGCCTTCGATGAAGAAACAATACAACCTAACAAGAAAAAGAATGTTAACCAAATAAGAAAAAATATATTGTGTGTTCTGAACATGTCTACTGCAGTACCTTTTAAGTTCTTCACGAAATATTCTTGCTTTTACTGTTCTAAAAGTTATGTGGAATTCGATGACCTCAAACAACATGTAATAGCAGCGCATCCAACTTGTGATCTGAAACAAAAATGTATGAAAAATTGTAAAGGGGAAAGAATATCGGTTAAAGTCGACATATCGTCGTTATCGTGTAGAGTGTGCTTTGAATCCATAGATAATATAGATTCTTTAATAGACCATCTTATAACTAAGCATGGAGCTGAATACGATAAAGCAACAACCGGATGTTTCGAATCATTTAAAATAGTCAAAGATAATATTCCTTGTCCAATATGTTCTACTGTTTTTAGATATTTTGGGTCCCTTCTAAGGCATATCAATTCTGAACATAGTAATAATAACAGAATTTGTGATTTTTGTGGTCGTAGCTTCAAAAACGTGGCTAATTTAAAGGTGCATATAACTTATGCGCATACCGGTTCGTGCGAGTGTGACGTTTGCGGCGTAAAGTATAAAAATCAATGGTGCTTAGGTCGACACAAAGCGAAATCTCACAACGCTAAAGATTTCCAATGTACGAAATGTTCAGAGCGGTTCCAATCACAATATCATAAACAAAAACATCTAATTAAAGTCCATGATATAGGTCATAAATGTTCGTACTGTGGAAAAATGTTCACGCGAAATTCTTTTATGAAAGACCACATACGTAGGACTCACTTGAAAGAGAAAAATGTGCCCTGTACAGTTTGTAATGAAAAGTTTTTTGATAATTATCTATTAAGGCTTCATATGGTAAAGCATAAAGGCGAAAGAAAGTTCACTTGTGAGATATGTGGTACAAAATTGTGTACAGTGGAGGACAAGTATAAGAAAACTGAAATGGTGCGTAAACTGTTACTTAAACGACGTAATGTCGAATATGTTTTGCAATATAGCAATGTTACTCCGTTCATGTGGTACAAGGGCAGGTATAGATGTTTCTATTGCGCCGAACCCATGAAAGATCCAGTCCTCTTACGTGAACACACGGCTAATGACCATCAATTTGCTAATTTAGAACTTGTCGTCCACGATCGTACTAAAAATAATAGAAACAAAGATGCAGCTGTGAAAATTGATGTAACCGATATATCTTGTAAATTGTGCCCAAAATCAGTTACAAATCTAGAACAATTGATAAACCATTTGATAATAGCTCATGATGCGGAATATGATGTTAGCGTGCCGAACTGTTTCCTTCCCTTCAAGTTAGACAGAGGTCAACCGACCTGTCCAATTTGTGATATAAAATTCGTTTTCTTTGAATATCTACTCCGTCATGCTAATAAACACCATTTGGCTCACGATTATATTTGTGACGTATGCGGAACGAGTTTTCAAGGCGAGAATCATTTGAAAATGCACAACAGGTATTATCACAGAGAAGGAGGGTATACATGCGATATATGTGGGATAAGCTTATCTACATTGTCAAAAAAGACACTCCACGAAAAAAACGTGCATATGCTTAATCTGTCTACTTGTCCACATTGCCCTGAAACATTTAAAAGCCCATATTTCAAAAAGTTGCACTTAGCTAACATTCACGGAGTTGAGGAATTAAAAATCAAATGTCCTTATTGTCCAAAAGTGTATCCTCAAGAGAGTATAATGTCTCGGCATATGAGAAGAGTTCATTTAAGAGAGAAAAATGTTGAATGCCAAATCTGTGGTGACAAATTCTTCGAACCATATGATGTGAAGCTGCATATGTTGAAACACAATGGTGATAAAAAGTTCATTTGCTCATTTTGTGGAAAAAAGTTTTCAAAAAAGGGTAACTTGAACTCGCACTCGTGTGTCCATTCTGAAAAGAAATATGTATGTTCTTTGTGCGGCAAGGACTTTAGCCATCGCCATAATTTGAAACAGCATATCACGACTTGGCACCCCCAGAATACGGTTGATCAAGTTATGAGCGTCACCGATGCAATCGATGGTAGTGAACTAATTCAAATGAAATTCGTTAGTGAATTGGAAGATGTGAAACCAATTGTGGGAGATGTTATTTAG
Protein Sequence
MFRLIDHLYVFKGTFYNPENLFSDIIPSKVPNSNTLRRRNLLILFNNTSIIPFKYRGKCRCFYCGEELPEYADLRKHTKAHGPCFENDRAIRLVKTDDAEVKVDISNIVCEICNEPFATFDEIISHLIIKHSFCYDKDVKLTIMTYRLIDLQCLLCDQKFNQVNELVAHANHKHPIQSLDCQICHQKFIRKPYLDAHMRLKHKNNYKCLKCSQMFISHSALQEHKSKSHVAVCNICFLKFSCQKKRLKHMKLEHANEPLKCGFCLKSMNTKLGFLRHAAKCTEHGMNGDDIYIIDDDDDKKPAVIQIRNNIACILNMSTAIPFKYFMNRFRCFYCPKNFTDCEELKEHTVIEHPVCDIDFKCMRLRNRQEGCVKIDISTLSCKMCYKKISNVESLIDHLISEHKVFYDRSIDSNMQSYKLIKNNYPCPICKEVYTHFSTLLRHMGQIHTDNNNICMHCGKSFRNLPNLRVHISNHHKTTGTYKCNRCDQEFSSNKYLQTHLGRLHAVKVFECPKCKEKFTSNYTMQRHMINMHSTGHKCAYCGKLFTSNCFMLDHVKRIHLKERNVECHICYENFFDIQCLKTHMVKHNGARNFHCDVCDENIPSKLHSANRLRRLNLKILFNNTSILPFKWRGKYMCFYCGETPKTYEKLVVHTEEHGQCSEKDRALQLIKAADVEVKVDTSNILCKLCKESFADLEAIVNHLVTIHHLLYNKNVKLSIIPYRLFDLKCLWCDEKFTYLGKLISHVNIRHPSQSIFCPKCKQKFNKKRDFDTHNRTKHRTEYICLKCSCNFLTSSDLLNHKRNWHPSRCNICLKSFLSFNKCLEHIENDHVSTEYTCGFCYYSTTVKKSFVKHVIECTESIEMPTHDIQIINKSPKVKQIRYNMSCIFNMSTAMPFKYFMSRFRCFYCPKDFQECDDLKEHTILEHPLCDTKLKSMKLRHRQDGLIKVDISTLSCKICFQKLQDLNTLIHHLNFEHKIQCDSSATVNLQAYKLIKDNFPCPVCLEVFRYFRTLLYHVGKSHSDNKNICVHCGLAFRNSPNLRAHITRHHKLASFKCSECDMRFFTNNYLQSHLGRAHGTKIVKCHECKERFKSTYEMQRHKIETHGSGHECSYCHKLFTGKSAVNNHIDEVPYDVCPSERRRKNLQILFNNTTIIPFKWRGRYICFYCGQNYNEYQSFRKHTRAHGLCSTSDHALKLIKGSHIEIKIDVSEIACEICYQPLTSIDEVVVHLINKHELEYDRSIDIPIQEYQLSDCRCRICGQEFPYFGYLIQHTNIVHPQNTVICDNCGEKFNKKRDLAIHMRRYHQEGGYPCDECPDFFESYTLLSKHKNNFHFRRCKICHLRFPSYTLLRRHIKCDHSEDNCPYCSKKCQTSQGLKQHITKCSKRCHVKVKQAFDEETIQPNKKKNVNQIRKNILCVLNMSTAVPFKFFTKYSCFYCSKSYVEFDDLKQHVIAAHPTCDLKQKCMKNCKGERISVKVDISSLSCRVCFESIDNIDSLIDHLITKHGAEYDKATTGCFESFKIVKDNIPCPICSTVFRYFGSLLRHINSEHSNNNRICDFCGRSFKNVANLKVHITYAHTGSCECDVCGVKYKNQWCLGRHKAKSHNAKDFQCTKCSERFQSQYHKQKHLIKVHDIGHKCSYCGKMFTRNSFMKDHIRRTHLKEKNVPCTVCNEKFFDNYLLRLHMVKHKGERKFTCEICGTKLCTVEDKYKKTEMVRKLLLKRRNVEYVLQYSNVTPFMWYKGRYRCFYCAEPMKDPVLLREHTANDHQFANLELVVHDRTKNNRNKDAAVKIDVTDISCKLCPKSVTNLEQLINHLIIAHDAEYDVSVPNCFLPFKLDRGQPTCPICDIKFVFFEYLLRHANKHHLAHDYICDVCGTSFQGENHLKMHNRYYHREGGYTCDICGISLSTLSKKTLHEKNVHMLNLSTCPHCPETFKSPYFKKLHLANIHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECQICGDKFFEPYDVKLHMLKHNGDKKFICSFCGKKFSKKGNLNSHSCVHSEKKYVCSLCGKDFSHRHNLKQHITTWHPQNTVDQVMSVTDAIDGSELIQMKFVSELEDVKPIVGDVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00776854;
90% Identity
iTF_00776854;
80% Identity
-