Hmel005430.1
Basic Information
- Insect
- Heliconius melpomene
- Gene Symbol
- -
- Assembly
- None
- Location
- Hmel221001o:6860657-6866813[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-11 6.5e-08 32.3 0.0 4 35 93 125 90 130 0.92
Sequence Information
- Coding Sequence
- ATGGATAATGCAGGAGCAGTGCGCTCCACGCTGGAGCGCTGGAGCACGGCTCCACTGAGAGAGACGGCCAGCTCGGCTAAGCCGAAACGATACAATCACTTAGCTCACGCGAGTGTGGAGCCGCTACACCTTCCTTTATTGCTGCTCTGTTCTACCGTGTGCGAGGATGCAAAATTGCTTGAGAACTCTCATGCATGGCTCGGAGCCTCCACATCTTCGATTGCAGAATACCATGGTCATACCCTCAAGTTGAAAGCACCCACTTGGACTCAGAGCCAGCTGCAAGAGGCGATTCAGGCGGTGGTCACGCAGCGTATGAGATTCACGCAGGCTGCCACCCACTATGGAATACCTAAAGGGACTCTATACGATAATATATTAGGGAAATCCAAAAGAATGGCAGTTTTAGACGAGGCCGGACTGTTGGCTAGCGAGGAACGCGCTGTCCTAGACTTCTGTTGTGAAACTAGCGTCTCTCCATATAATAGAAGGACTAAGAAGTCAATTGTTGAAGTTTTGGCATTCGTTGAGAAGCTGCGTCGCAGTAGAGACTCTGGTTTCGCGTTCATTGGTCTGACAGGGTTCCGTTGGTGGTGGGCTTTCTGCAAAAAACATTCTATAGTCTCTCTGTATTACGAAGGTTCCTCTAAAGCTAAAAACTCAAAAGTTAAAACCGAACATACAGATGATGATGAGTCATGA
- Protein Sequence
- MDNAGAVRSTLERWSTAPLRETASSAKPKRYNHLAHASVEPLHLPLLLLCSTVCEDAKLLENSHAWLGASTSSIAEYHGHTLKLKAPTWTQSQLQEAIQAVVTQRMRFTQAATHYGIPKGTLYDNILGKSKRMAVLDEAGLLASEERAVLDFCCETSVSPYNRRTKKSIVEVLAFVEKLRRSRDSGFAFIGLTGFRWWWAFCKKHSIVSLYYEGSSKAKNSKVKTEHTDDDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00776675; iTF_00775958; iTF_00778699; iTF_00457175; iTF_00457959;
- 90% Identity
- iTF_00778699;
- 80% Identity
- -