Hmel003138.1
Basic Information
- Insect
- Heliconius melpomene
- Gene Symbol
- lov
- Assembly
- None
- Location
- Hmel205001o:7245111-7247867[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-19 1.2e-15 57.0 0.0 1 44 122 165 122 166 0.96
Sequence Information
- Coding Sequence
- ATGTGCGGCGTAACGCGGTCTGACCGCATACGCAACACATTCATTCGAGGTAGTCTTGGGGTCCGTGACGTAGCGGATAAGCTCCAAGAGCGTCGCTTGAGATGGTTTGCCACGTTACGCGCCGGCCTAAGAACTATGTCGGACGCAAGTGCCTTGCTATACAAGTTCCGTGGGGCGCCGACCCTCCCGGACCGCCCAAGGAAGCGCTGGTTGGATGTCGTGATGCAGGACATGAGAGCCAATGGTCTAACCACCGAGGACGCAAAAGATCGTGCAAAGTGGAGTAGGCTAAGTAGGAAGGCAGACCCCGGGCGGCCGAAGGGGCAGCACAGCGCGCCGCGCGGCGGCCCGCCCCGCTCCTGGACCAACGCAGAACTCACGGAAGCGCTACAACACGTGTGGAACAAGAAGATGACAACGAGCCAAGCATCAAGAATATTCGGCATCCCGTACAATTCCCTTCTGATGTACGTGCGGGGTAAATACGGCAAGAGCTTAAAACTGGAGCAACTCCGAAAAGATTGTATCGGCGGTCCGTTGGAGGTGTTAAATTTAAATTCAGGCAACAACAACAACAACCACCCGCCGGGCAAGCACCACGATAAGGACGACCAACACCAGAACGCGAGCCAGCGGCCGGCGAGCTCGGAGCCGGACATCTCCTCCAACCCGATGTTCAACCCGTTCCAGCAGGGCTTCTACCCAGAGTTCCCGCCCGGGTTCCCCATGCCACTCAACATGCTGCACCTGCTGCCGCCGAGCGAGAAGGCGCGCGAGCTGTACCAGTCGATGCCGATGGCGCTCGACTCGCTGGCGGGCGTCACCAAGGAGGAGGACTGCAAGAGCGACAGGTCGAAGGAGAACTCCGCCGACGAGGAGGGCGAGGCGTACCGCGCGCCCGCGCACCCGCCGCACCAGCCGCACCCCCCCGACGCGCGCGCGCTGCTGCACCACAACGGGCAGGACTAG
- Protein Sequence
- MCGVTRSDRIRNTFIRGSLGVRDVADKLQERRLRWFATLRAGLRTMSDASALLYKFRGAPTLPDRPRKRWLDVVMQDMRANGLTTEDAKDRAKWSRLSRKADPGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLEVLNLNSGNNNNNHPPGKHHDKDDQHQNASQRPASSEPDISSNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPSEKARELYQSMPMALDSLAGVTKEEDCKSDRSKENSADEEGEAYRAPAHPPHQPHPPDARALLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01181821; iTF_00774431; iTF_00781759; iTF_00780960;
- 90% Identity
- -
- 80% Identity
- -