Basic Information

Gene Symbol
Xbp1
Assembly
None
Location
Hmel220003o:9009157-9012655[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.44 4.2e+02 1.1 0.0 14 25 27 38 26 40 0.90
2 3 1.8e-15 1.7e-12 47.2 16.4 2 63 43 104 43 106 0.94
3 3 3.5e-05 0.034 14.3 1.0 32 56 87 111 86 115 0.91

Sequence Information

Coding Sequence
ATGAGTGCACCTATCATTATCACTGTTCCCAACAATTACCTGGCGGTGGAGGAGATGGAGTCAAAGGTCGTGGTCGACGTGGCTGCCGCTCCGTCCAGGAAACGCCGGCTCGACCACCTGACATGGGAAGAAAAAATGCAAAGAAAGAAGCTTAAAAATCGTGTGGCGGCGCAAACATCTCGCGACCGGAAAAAGGCTAAAATGGATGAAATGGAGAGCAGAATAAATCAATGTATGGAAATGAACAAGCGTTTGGTTAGTGAAGTCGAGAATTTAAAAGCAGTGAATGAACGTCTGCTCAGTGAGAATGCAGAGCTTCGGAACGCCACGGCGCGGGCCGTCGGGGGAGCCCCAAGACCAGCAGTGTCTTATCCTCAGCAGAAGGAGGGGCCCCCACCGGCGACCAGCGCGGTGCGCACCCTGCTGGCCCTGTTGACCCTCTCGCAGACCTGCTCCAACACCTCGACTCCCCTGAGTACCTCGACACCCTTCACGAACTTGCCGATACACTGCTCAAAGAAATTACTGGAGATTGTACAGGAGAGAATCAACATGAAAACAGGCATAGTTCCGAAGACAATCAAGGAAGAGAAGTGGATATTGGCACAACATTCCTACGCACAATCCTATCCTATCACTGATACGGAGAAAGAGGATAATGACAAAGGAGACATGTTTTACGCTAGTTACGAAGCAAATGATTGTATAACTGTTGAAGTTCCTAGTGAAGAACAAGTTGAAATACAAACTGAAATACAAACTGAAAGTGAAGTACAAACTGATATTGAAAAAGAATTCAATATATTGACTGATAACAGTGAAGTTACTCTGGAATGTGATATGAAGTTGCTTTCTCCTATGTCACTATCACCCAAGTCAGTGGAGGAAAATTTGTTTGGAGTTTCACCGTCTCATACAAACTTTAGCTCAGACTTGGGCTACGAATCACTATCCTCACCGCTCAGTGAACAAGAATCTATGGACTTGTCAGATTTTTGGTGTGATTCTCTATCGGAATTGTTTCCAGGTCTAGCTTAG
Protein Sequence
MSAPIIITVPNNYLAVEEMESKVVVDVAAAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRINQCMEMNKRLVSEVENLKAVNERLLSENAELRNATARAVGGAPRPAVSYPQQKEGPPPATSAVRTLLALLTLSQTCSNTSTPLSTSTPFTNLPIHCSKKLLEIVQERINMKTGIVPKTIKEEKWILAQHSYAQSYPITDTEKEDNDKGDMFYASYEANDCITVEVPSEEQVEIQTEIQTESEVQTDIEKEFNILTDNSEVTLECDMKLLSPMSLSPKSVEENLFGVSPSHTNFSSDLGYESLSSPLSEQESMDLSDFWCDSLSELFPGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00620968;
90% Identity
iTF_00774252;
80% Identity
-