Basic Information

Insect: Heliconius himera
Gene Symbol: -
Assembly: GCA_013421065.1
Location: JAATLT010012587.1:71078-75713[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0066 0.5 11.1 0.5 2 23 86 107 85 108 0.95

2 9 0.32 25 5.8 0.8 1 20 319 338 319 342 0.92

3 9 3.2 2.5e+02 2.6 3.8 2 21 350 370 350 372 0.93

4 9 6.7e-06 0.00051 20.5 2.1 1 23 378 400 378 400 0.98

5 9 0.0025 0.19 12.4 0.5 2 23 406 428 405 428 0.94

6 9 0.0003 0.023 15.3 2.8 1 23 434 456 434 456 0.99

7 9 0.11 8.6 7.2 4.1 1 23 462 484 462 484 0.97

8 9 0.0075 0.58 10.9 1.3 1 23 490 513 490 513 0.97

9 9 9.1 7e+02 1.2 4.8 1 23 522 544 522 544 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0066	0.5	11.1	0.5	2	23	86	107	85	108	0.95
2	9	0.32	25	5.8	0.8	1	20	319	338	319	342	0.92
3	9	3.2	2.5e+02	2.6	3.8	2	21	350	370	350	372	0.93
4	9	6.7e-06	0.00051	20.5	2.1	1	23	378	400	378	400	0.98
5	9	0.0025	0.19	12.4	0.5	2	23	406	428	405	428	0.94
6	9	0.0003	0.023	15.3	2.8	1	23	434	456	434	456	0.99
7	9	0.11	8.6	7.2	4.1	1	23	462	484	462	484	0.97
8	9	0.0075	0.58	10.9	1.3	1	23	490	513	490	513	0.97
9	9	9.1	7e+02	1.2	4.8	1	23	522	544	522	544	0.95

Sequence Information

Coding Sequence: ATGTCTTCTCAATGTTTTATAATGAATGTCAACAGGGTGATTCCACAAAATTTAACAGAAAACGTGGAAATCAAACCACCTTTATCACAACATAAAGTAATGTCCTATGAAGAGAAATCTGTGGGCTCGACAGCATTCTTTAAATGTGAGGCGTGTCCGTATATGGCCTTTGCAGAAGATGATATAAAATTCCACTTATTTACTGTACATCCAGATCTTGCAAAGCGAAATGGACTTGCTGATAACATACAGATAACTTGTCCTGGTTGTACCAGTGTCTTTGATGCAGAAGAAACCCTAAGAACTCATCTACGTAATCATCACAAAATGGGAATCaaagatgttaaaaaaatggttaaaagtGTTGTTCAAATAGCACTTAAAGATGCAAAATTAAAGAAAGAGATTACACAAACCGATACACCTGTACAACAACAACAAGAAATAGCTGAAGTGAAGATACCACAAGTAATTGAAATAGTACCAGATATAAATGCAACTCATGAACAATTACCTAAAGGTGTGGCTTTTATATCTGTAGATGAATTACATAAAATGAGCACACCCAACTTTGAAAAGGTAGACCCAAAAGAAGTTATTCAAGAAGCAAGCATAAACATTGTGTATACTAATGATGTTTCCACACAATATGTTAATGTATCTAATACAGGAGCCTCAACTAATGCTTGCAATTTAATTCAAATGTCAAGTGTACCACCAGATCTCATATCATCAATAACTAGAATACcaacaacaatcgatagtacTTTATCACCACAGATAGAAAGTGATCCATCTCACAGTTCATCTCaaataaaaccaataaaaaagaaactaaaatctGATACTGACCCTGAAAAGAATGGTGAACTATGTTCAATAATGAATTGCCGTATTAGGATTAAAGATCCGAATAATTTGTCCTACCATAGGAAATGCCATCAAAATGGTTCATTTCAATGTCCCGAGTGTTCAAAATGGTTGTCGTCTACAGAACAACTTCATACTCATCTTTGGAAATTACATAGTATTGATCTAGAGATGCCAACATGTGAAATTTGTggttacaaaacatttttaagacacaggctattaaatattcatatgaaaTGTCATGATAATATCAAAAGTTATACTTGTTCAATATGCCAAAAGAAATTTAAGAATGCCAACCAGCTCTCTAAACATAAAATGATTCACAAAGGTAATAGAGTGCAATGTCATATTTGCAACCGGGGCTTCGGCAATGAGAGGCTAATGCGGAAACATGTTGCTTCAGTACATGATAAGCTAAAGCCTTACAAATGTTGTAACTGTGATTACAGTGCGGCCAGGAAAGAACAACTTAAACTTCATTTGAGGTCTCACACAGGCGACAAACCCTACGCTTGCGACCAGTGTAGCTACTGCACAGGAGACCATAACGCCTTACGCAGACACAAAAAACTACATTCCAAGGAGggtgtatataaatgtaaatattgtccCTACACTACTATACAATCTACAGTTTTCGCATATCACATGATCTCCAAACATCCTAACCTTAATTCTGATGATGTGCATTGTTGCGCCTTCTGTCCATTCAAATCGatcaataaagaaaaatatgtcaCTCATTTAACCACTCATAGAGATAAGGATGGTATGAAAATGTTGATAGACATAAACACGGGACCAAAAACGAATAAACCAAGTTGGACTATACCGAGCGAAACTGATAAATCTAAAGAAATCCAAAATACAGTGAATGAGCAAAGTAACGATGCCAATCCCAAAACAGTTAACACTATTCCTATAGAAGTGTACGATTGTGACAGCTTACCTGACACTATGCCTCAAGAGTACCCAAAAAATTACTGTACAACTTCTTCGAACGACGTACAGCAGTCGAATTTTAATGCTGAAACTGTAACAGATCTAAGCAAAGACGATAATAATTCCGATTGTCTCATTTCTGAGACTTTCAAAATGCAAGAAAGGCATCAGTTCCCCTCCCAGCATCCGTTACAAATGTCTTACGATGCATCTCAAAGTAATTTGCATTTTCTGAGCCCAACTGTGACTATAGATCAGGGTCTTTTACAGAATAATAGCATAAATTCTCTCGCGTCTAATCATTCCCCAATAGGTAATGGTATGAATAGTAATATTATGAGTAATTTCCCTATAAGACTGCCTCCCTCGCCGATATCAGTacgaaataatataacattgaaGCCAGTGGACAAGATTTGTGTCCCTATAACTAAAGTAACGGGtccaataataaatcaaatgcaAATATTGCCCATACCGTCTTCAAGTCATTCTCCTATCAATATTTCCAATGAACCAGAAGGCGTTCCAAGGAAGAAGCCTAAAATATCTGTTAAAAGCAATCTTATACTAAAAGGGCCAGATCAAGTTAACATGTTTCATTCGCAACAAAAAATGGCATTCAAACGTTTAGAAGACAACGAGAGATTCGGACTCGGTGGTCCGGTTACTTTCAATAACTTAATAACAACTCAGTTCATGCAATTACAGCCAGAGCCGGCGTTAAGCGAGTCTCCGAATGACATTATGACTTATCCCCAAGAAAATATGTTAGGAAACTCAGCAACCACCCCCGTTGATAATGAAATGACCAATAATCCCCAAATTTTCTCCTTCAACCAGCAAATGAATGTCAATTCTATGACAATGATGGAATCGCAACAGAAAATACAGACTAACGATCCAAGTTACATTAAATTGGAGGCCACGATAAAGCAAAATACTCAATCGCCTAGTTTAGAAAGAATGTGTAACGCCAATTTGCTCAGCAATCAAGCTATTAGTAGAGAGTACAAGGCGTCACCACCACTCGAGGATATTCACAAAAATATGAACGAAATCAAAAATGAAGTGAAATCTGACGCGTTTTATAATATGACGATTAATAATTCAACAACTAATCCTCCTATAATTGATCAATATATGATAGACAATATAATACCGGAGCAATATCCCGCGCATCTAGATCTTTCCACAGTAGTTCTACCGGAAGTGAACCAACAGAACGACGTCATAGAAATAGATGACAATTCTGACGACAATAAGCTGTTGCCCCGTTTTGATATGAATTTTTCGTTAGAATCTCTTTATTTGATGCACAATGATTTCCATTTTTTAGATAATGATATTGCCAGTAACAATATGGGATCTGAACCTGTAAACGAAATGAATAGAATGGTGGCGGAAGTGCCTGTAATAAATCAAAAGGATAATTTAGATGTTGTCCCCGTTGAGGCCAATAGCGAGTGTCAAAATTTTATCCAAGGCAAAAAAGATCCCATGATGAACACCTCGGTTCGACCGtcaactaacaaaataaatgttaaaaacattgaattaatgaaaaattaG
Protein Sequence: MSSQCFIMNVNRVIPQNLTENVEIKPPLSQHKVMSYEEKSVGSTAFFKCEACPYMAFAEDDIKFHLFTVHPDLAKRNGLADNIQITCPGCTSVFDAEETLRTHLRNHHKMGIKDVKKMVKSVVQIALKDAKLKKEITQTDTPVQQQQEIAEVKIPQVIEIVPDINATHEQLPKGVAFISVDELHKMSTPNFEKVDPKEVIQEASINIVYTNDVSTQYVNVSNTGASTNACNLIQMSSVPPDLISSITRIPTTIDSTLSPQIESDPSHSSSQIKPIKKKLKSDTDPEKNGELCSIMNCRIRIKDPNNLSYHRKCHQNGSFQCPECSKWLSSTEQLHTHLWKLHSIDLEMPTCEICGYKTFLRHRLLNIHMKCHDNIKSYTCSICQKKFKNANQLSKHKMIHKGNRVQCHICNRGFGNERLMRKHVASVHDKLKPYKCCNCDYSAARKEQLKLHLRSHTGDKPYACDQCSYCTGDHNALRRHKKLHSKEGVYKCKYCPYTTIQSTVFAYHMISKHPNLNSDDVHCCAFCPFKSINKEKYVTHLTTHRDKDGMKMLIDINTGPKTNKPSWTIPSETDKSKEIQNTVNEQSNDANPKTVNTIPIEVYDCDSLPDTMPQEYPKNYCTTSSNDVQQSNFNAETVTDLSKDDNNSDCLISETFKMQERHQFPSQHPLQMSYDASQSNLHFLSPTVTIDQGLLQNNSINSLASNHSPIGNGMNSNIMSNFPIRLPPSPISVRNNITLKPVDKICVPITKVTGPIINQMQILPIPSSSHSPINISNEPEGVPRKKPKISVKSNLILKGPDQVNMFHSQQKMAFKRLEDNERFGLGGPVTFNNLITTQFMQLQPEPALSESPNDIMTYPQENMLGNSATTPVDNEMTNNPQIFSFNQQMNVNSMTMMESQQKIQTNDPSYIKLEATIKQNTQSPSLERMCNANLLSNQAISREYKASPPLEDIHKNMNEIKNEVKSDAFYNMTINNSTTNPPIIDQYMIDNIIPEQYPAHLDLSTVVLPEVNQQNDVIEIDDNSDDNKLLPRFDMNFSLESLYLMHNDFHFLDNDIASNNMGSEPVNEMNRMVAEVPVINQKDNLDVVPVEANSECQNFIQGKKDPMMNTSVRPSTNKINVKNIELMKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00897335;
90% Identity: iTF_01182316;
80% Identity: -