Basic Information

Insect: Heliconius himera
Gene Symbol: -
Assembly: GCA_013421065.1
Location: JAATLT010009847.1:19382-21494[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0069 0.53 11.0 0.5 2 23 205 227 204 227 0.94

2 9 0.00024 0.019 15.6 0.2 1 23 232 255 232 255 0.93

3 9 0.00012 0.0092 16.6 2.7 2 23 259 280 258 280 0.93

4 9 4e-05 0.0031 18.1 0.2 2 20 285 303 284 305 0.94

5 9 2.3e-06 0.00018 22.0 1.7 1 23 321 344 321 344 0.96

6 9 0.015 1.2 9.9 1.8 1 23 350 372 350 372 0.96

7 9 1.8e-05 0.0014 19.1 1.1 1 23 378 400 378 400 0.99

8 9 3 2.3e+02 2.7 3.2 1 23 406 428 406 429 0.90

9 9 8.2e-05 0.0063 17.1 3.7 1 23 434 456 434 456 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0069	0.53	11.0	0.5	2	23	205	227	204	227	0.94
2	9	0.00024	0.019	15.6	0.2	1	23	232	255	232	255	0.93
3	9	0.00012	0.0092	16.6	2.7	2	23	259	280	258	280	0.93
4	9	4e-05	0.0031	18.1	0.2	2	20	285	303	284	305	0.94
5	9	2.3e-06	0.00018	22.0	1.7	1	23	321	344	321	344	0.96
6	9	0.015	1.2	9.9	1.8	1	23	350	372	350	372	0.96
7	9	1.8e-05	0.0014	19.1	1.1	1	23	378	400	378	400	0.99
8	9	3	2.3e+02	2.7	3.2	1	23	406	428	406	429	0.90
9	9	8.2e-05	0.0063	17.1	3.7	1	23	434	456	434	456	0.99

Sequence Information

Coding Sequence: atgggaTCTCTAAATCATGCATTACATAGTATTATTACAAGGAAATATAACGCTTGTTGCCTGtgctttaaaataattgaaggcAACCCCGTTAATCTTCAGGATGAAGTGGttttaaaagacaataataatgaaagtaCAATCAAAATATTAGATGTATTAATCTCAGTATTAGATTATGAGACGTGTAATAATATATCtgcatttgaaattttatgcaAACAATGCACTCGTTCTGTTGTGGCAAGTTATAAGTTTATAACAACATCCAAAGAAAATGTAGAATTATTAAGCAAAGCACTTTCTAATTTATCTAGTTGTTTTGATAATACCAGCGATAATTATGTTGATTGTAAAACCTTGTTTGTTACATTGGATAACAATAGTTTAGCTACACAACAGTATTATGACAATAAGCCACCAGTGACCTCAACTTCTATGGCACATAAAAGATTTCAGTCACTATTTCATATTGAAACAAAACCATGTATTAAAATAGAACCCACACTAAAGAAAGAAGATtttaacaatagaaaaaaaaggagaGATTATTTCTCCCTACCTATAAGAACAAGTGAAATGCTATATGACAAAAATGACAGGaaaaacttaaaatgtaaaGTATGTATGAAGATTTATCCTTCATTGTCTAGTTTAAGAAATCATTTTATAAGAGTACATGCTCCAAAAAACTATAAGTGTACAATTTGTGATAGAAAATTTGGCTCCATAGCCCTTTTGGAAGCTCATAAAAGTGAAAGTCATTGTACACTTGTATGTACTGAATGTGGTAAAACTTTTCATAACCGTCATACACTAAAAATGCATGAAATaggtcattatttaaaattagtgtGCCAGGATTGTGGCAGAGTTTATAAAAgtcaaacaacatttaaaaaacatatagatttaaatatatgtggACAGAAAACTAGAGCATCACCAGCTGATGCAAAGTTCACTTGTGattattgtaacaaaaaatatacacagaAAGTTTCTCTGAGAGTCCATATTCAATATGAACATGGTAACTATAAAGGACATGAATGTAAatggtgtaaaaaaaaattttgggcCCAAAGTCGTCTTAAAGCTCATATAGTAAAGCAtactcaagaaaaaaaatttcaGTGTACTATGTGTGGAGGAAAATTTGTGTCTAAAGAGTCTTTATTATATCATACTAGAACTCATACTGGTGAAAAGCCTTATAAATGTGAATTTTGTGATAGCAGATTCCTTTCGGCATCTCGAAGAGCTGATCATACTAAACGTCATCATTCTGATGCAACATTTCAATGTGATATATGTAACATAAAGTATACAACACAAATTTGTTTAGAAAAACATAAGAAAACCCATGAAAAACCAGATAAATTGACTTTGCATTTACAACTTCCTAAAGGTTTGTCAGAAGAAGATGAAATTTTCTTAGAAGTTTCTGATGATGACTACTTAGGGAACAATGTTTAA
Protein Sequence: MGSLNHALHSIITRKYNACCLCFKIIEGNPVNLQDEVVLKDNNNESTIKILDVLISVLDYETCNNISAFEILCKQCTRSVVASYKFITTSKENVELLSKALSNLSSCFDNTSDNYVDCKTLFVTLDNNSLATQQYYDNKPPVTSTSMAHKRFQSLFHIETKPCIKIEPTLKKEDFNNRKKRRDYFSLPIRTSEMLYDKNDRKNLKCKVCMKIYPSLSSLRNHFIRVHAPKNYKCTICDRKFGSIALLEAHKSESHCTLVCTECGKTFHNRHTLKMHEIGHYLKLVCQDCGRVYKSQTTFKKHIDLNICGQKTRASPADAKFTCDYCNKKYTQKVSLRVHIQYEHGNYKGHECKWCKKKFWAQSRLKAHIVKHTQEKKFQCTMCGGKFVSKESLLYHTRTHTGEKPYKCEFCDSRFLSASRRADHTKRHHSDATFQCDICNIKYTTQICLEKHKKTHEKPDKLTLHLQLPKGLSEEDEIFLEVSDDDYLGNNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00248443;
90% Identity: iTF_00778248; iTF_00782920; iTF_00775529; iTF_00776243; iTF_00777523; iTF_00778973; iTF_00780515; iTF_00621487; iTF_00782096; iTF_00781274; iTF_00774748; iTF_00776928; iTF_01182168; iTF_00457471;
80% Identity: iTF_00777523;