Basic Information

Insect: Heliconius himera
Gene Symbol: -
Assembly: GCA_013421065.1
Location: JAATLT010018497.1:11667-38027[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0055 0.42 11.3 1.8 1 23 476 498 476 498 0.97

2 9 4.6e-05 0.0035 17.9 0.3 1 20 545 564 545 566 0.94

3 9 1.3e-05 0.001 19.6 0.3 3 23 587 607 586 607 0.98

4 9 7.8e-06 0.0006 20.3 3.7 1 23 613 635 613 635 0.98

5 9 2e-05 0.0015 19.0 1.3 1 23 640 662 640 662 0.98

6 9 3.4e-06 0.00026 21.4 1.5 1 23 671 693 671 693 0.99

7 9 1.5e-06 0.00011 22.6 0.6 1 23 699 722 699 722 0.95

8 9 0.089 6.8 7.5 3.4 1 23 728 751 728 751 0.92

9 9 1.9 1.4e+02 3.4 5.5 1 23 759 782 759 782 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0055	0.42	11.3	1.8	1	23	476	498	476	498	0.97
2	9	4.6e-05	0.0035	17.9	0.3	1	20	545	564	545	566	0.94
3	9	1.3e-05	0.001	19.6	0.3	3	23	587	607	586	607	0.98
4	9	7.8e-06	0.0006	20.3	3.7	1	23	613	635	613	635	0.98
5	9	2e-05	0.0015	19.0	1.3	1	23	640	662	640	662	0.98
6	9	3.4e-06	0.00026	21.4	1.5	1	23	671	693	671	693	0.99
7	9	1.5e-06	0.00011	22.6	0.6	1	23	699	722	699	722	0.95
8	9	0.089	6.8	7.5	3.4	1	23	728	751	728	751	0.92
9	9	1.9	1.4e+02	3.4	5.5	1	23	759	782	759	782	0.95

Sequence Information

Coding Sequence: ATGTTGCATAATGAGGGACAGTACGGTCCAAACGACATGCCATTAAACGTTTCACAAGCAAGTATGATGAGCGGTCGTGTAAATATAGGTAACAATCTCAACAATCTGGAGAAAATGCCTCAACACCCGCCACCGCCGGTGAATTCACACTTCAATTTGCCCGAATTCAATCCGTACGGTCTGAATATGAACGTTGGGTTAAATCAATTCCAAAATTTCCATCCTGTTGGTTTCCCACAGAATCACATACAGAATTGGCAGAATAATGCGTTGCCCATAAACTTGCAAATGAACAGCCAACAAGGCTACATGTACGGGAAACCAGACACCGATTATAAAGAACAAAGCTGCAGTAAAAACATGTTGACTGTTCCTCAAGTGCACACAAAGGCTTTCCACAAGCAGATGGGAATGGACATGGACAGTTACCCCGTTAATGATTATCGACATTATTCCGATTATAACCCTGATTTAAGTGTAAAATCACACAAATCAGAAGCAGATATTAGACATATGCATCAAAACCCTAGAATGGATGACCGTATTATACATCCACCATATTTGGAACAAAATTTGGACTTGAGTAAGCATAAAATGCCTAACAGCTATCCAAAACCTCTTACAATTTATCAAAATTCCCAACTTTCTATAACAACAAAAGAAGTCGATCACCAAGTAAACTTAAACAATCATATTGATTTGAGTATTAAAGGTCATAAAATGGATGAAAAAAGATATCCAGAACAAAATATATCGAGTACCATTAAACCAACTGAAAGTTTATCATTTCCGGAGGCCCAATTGGATTTATCGAGACCTCAAAAACCTGAAAATCCTTTTCCTTACAACACAGATTTAAACAACAGATACTATAAAGATTCCCGACGACGAAGCCTCGAGAATACAGTGAAAatgattgaaaatataatttcccacaatcaaaaaaatcaagccGAGACCTTTACTCCTAACAATGATACATCAAAGAAGAGTTTACCTAAAGAAACAGAAACTGTCATAGAACCAAAAATTACCGAAAAACCGACTAACTATAATGAAAGTGCCCCAATTGAAGATACACAAACAccaaatgaaaatgataaacaACATGATTCAAAcattgaaaataatgataataatgacaataatgattatgaaaatgaaagcAGTGATGAATCTTCCTCAGAAGAGGATATCAAACCCAATATAAGTAAACTACCAGTTATTCCCATTGATGATTCTGTTGAAATCAAAATAGAAGTTGTTCCAAGTATAATAGACATGGAACACTTGAACCCATTCCATAGAGATATGCATGGGGTTAGGGGAGAAGACGTTGGAGACACAGATATTGTTGATGCTGAGCGAAGTATCAATTTAGCTAGGGAAATTATATCTAATAACATCCAAGTCCAAGCTGCGTTCTTCGAATGCCCGCATTGCAACTTGTACTTCGACAACCCAAAACGTTTTCTAATCCATACAAAATGGCATGCCTTCGGTCTAACAAACGAGAAACGTCTAGAAAATCAGAAAGAGAAAGAAATGCAGAGACATATGAAGAAGGAACAGAGAGTAATGGAAAGAATGAATCAAAATGAAGTGACAGATATGAACGCGCCGGGAAGGAAGTTCAGCTGCAAGGATTGTGATAAAGTGTTTAACGGGAAAGCCGCGTTGAAGAATCATAAGGCTAGgcagagagaactttgtGATAGATATCATCCAAAATCAAATGCAACGAATGCTGCACGAGATTGTAAGATCTGTGGCAAGACTACAGTGGGATGGAATAACATGAGAGCTCATATGAAGACCCATAGCAGCGAGTCTGGGTACCAATGTGCTGATTGCCCAAAGAGATTTAAACATCCTCACTCATTGGCCAAGCATAAGGATACACATTTGGAGAAAACACACGAATGCCAACAGTGTCCAAAGAAGTTTGGTTCAACAGCATTACTGAATGTGCACATGAAAACACACGAGCGTTTCTTGCGTGGCGCCACTTTTAGATGTACTTATTGTGGGAAGGGCTTCTTTGAGTCTTATAGTTTGcaggtaCATGAACGAACTCATCGTAATGAAAGACCGTATCTGTGTGAGATATGCAACACCAGTTTCGGTACTAATTCAAGCTTGAAGCGTCACATTAAAGtgTCTCACAGCACATCAAAACCGTTCGAGTGTTCCGTTTGCCACCGTTGTTTCGTATCCGAAGTTATAAGAGAACGTCACATGTCGAGAAACCACGGAAACCCTGAAGATTTCAAGTTTCGATGCAAGCAATGTCCgtgcaaatatttaaaactgaaaGATCTaaagaaacatacatacaaaatccATCCGAAAGGCAAAAGGAAGAAAAAGGTCCAATCGGAAAGCGAATAA
Protein Sequence: MLHNEGQYGPNDMPLNVSQASMMSGRVNIGNNLNNLEKMPQHPPPPVNSHFNLPEFNPYGLNMNVGLNQFQNFHPVGFPQNHIQNWQNNALPINLQMNSQQGYMYGKPDTDYKEQSCSKNMLTVPQVHTKAFHKQMGMDMDSYPVNDYRHYSDYNPDLSVKSHKSEADIRHMHQNPRMDDRIIHPPYLEQNLDLSKHKMPNSYPKPLTIYQNSQLSITTKEVDHQVNLNNHIDLSIKGHKMDEKRYPEQNISSTIKPTESLSFPEAQLDLSRPQKPENPFPYNTDLNNRYYKDSRRRSLENTVKMIENIISHNQKNQAETFTPNNDTSKKSLPKETETVIEPKITEKPTNYNESAPIEDTQTPNENDKQHDSNIENNDNNDNNDYENESSDESSSEEDIKPNISKLPVIPIDDSVEIKIEVVPSIIDMEHLNPFHRDMHGVRGEDVGDTDIVDAERSINLAREIISNNIQVQAAFFECPHCNLYFDNPKRFLIHTKWHAFGLTNEKRLENQKEKEMQRHMKKEQRVMERMNQNEVTDMNAPGRKFSCKDCDKVFNGKAALKNHKARQRELCDRYHPKSNATNAARDCKICGKTTVGWNNMRAHMKTHSSESGYQCADCPKRFKHPHSLAKHKDTHLEKTHECQQCPKKFGSTALLNVHMKTHERFLRGATFRCTYCGKGFFESYSLQVHERTHRNERPYLCEICNTSFGTNSSLKRHIKVSHSTSKPFECSVCHRCFVSEVIRERHMSRNHGNPEDFKFRCKQCPCKYLKLKDLKKHTYKIHPKGKRKKKVQSESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00774759; iTF_00775506; iTF_00781266; iTF_00780503; iTF_00782089; iTF_00782879;
90% Identity: iTF_00781266; iTF_00780503; iTF_00782089; iTF_00782879; iTF_00775506;
80% Identity: -