Hhim001850.1
Basic Information
- Insect
- Heliconius himera
- Gene Symbol
- Arid2
- Assembly
- GCA_013421065.1
- Location
- JAATLT010014349.1:624-13077[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-22 4.7e-19 68.7 0.0 2 89 17 101 16 101 0.94 2 2 4.9 1.2e+04 -3.1 0.0 27 48 613 634 599 649 0.68
Sequence Information
- Coding Sequence
- ATGGCAAAAtctcaaataaatacaaagtcTAGGGATTATTTACGTGACaaggaaatatttttgaaagaattaaaacaattcaacgaaagtaaaaaTATCCCATATAAAATACCGGTGGTAAATGGTATTGATATAGACTTGTATCTTTTATACTCTTTAGTGCTTCAACGTGGTGGTTTAAGTAAAGTAAATCAAAATGACACTTGGGAATCATTTTTAAGGCAGCTAAGACTTCCACATCCCTGTGTAAATGGATCTACTCTTTTAAGAAGAATATatggtacttatttagaaaaATATGAACGGGCAAAAGGACCTCCTGGCAGAGATGATGATAATGATATGGATGAAGATCCAAGACGAGGCTCCCGAAGTGGCCATGGTGGTATGCCACGGATTAGTTTTGGCAGTGGTACTTATATATCAgCATCTGGTGAACAACTCCGTACAGGCAACCGTGTAGCTGGTCCATCTGAACGACTGACATTATCACTCTTATCACCTATGCCGAATGAACAGGATTTTGCCGTGAATGTCTGTACCGTGCTTGCAGCAGATCATTCTAATCGCTTACCATTGAGTACTACACCTCATATATTGGACTTTTTATTGGCCCATGCTGGTGTTTATAATCATTCAAGCTTACGGGATACGATCGGTCGTTCTTATTACGAGGCTCGAGGCCGTTACCCTCATGAGTTCTGGCAGCTCCGTGCTGGGGGAGGTGGTGCCAAGGAGTTGGCAGATGAAACCAAGTTCATGAACCCTGGCCTAGAACAGCCCGAGCTGATGGTCCAGGCGCTCGCTGCTCATAATGCACTGACTGATTGTTTGATGCAGGGGGAGGAGAGTGGGGATGTGATCGAGAAAGTCCTGGACGATCAGGACATCCTCGAAGATTGGGTAACAGAACCTTCAGAGGAGGACCAGCTCTTCGCACCAGAACTTAGTGGTGGTGCAAGTTGTGTGTACACACAACGAGTGTTACAAATAGCATCTATTGTACGATCACTGTCCTTCCATGAGGAAAATGTGCAGTATCTTGCCAGAAATACTACGCTTATACGGTTTCTTCTTTTATGCGCAAATTGTTGGGTCGGCTCGCTGCGACAAAGTGGTTTAGACACACTTGGAAATGTGTCTACTGAACTAATTATCAAGGACCCAGCAACATGTCTTATATCACGACACGTTTTATCAACAATACAATCGGCGCTTGTATCTCCGGACAGAGCTCGAGTGCTTGCAGCATTAGAATTACTCAATAAATTAGCGCAAAATGAGGCCAATGAAGATGCTCTATTGAAAGCTCTTGACCCTAagGTGTACAGCGACGTGGTGGCGCTGCTGACCCTGCGCGACATCATGGCGCTGGTGAGCGCGCTGGAGTGCGTGTACGCGCTCACGGCGCTCGGCGACCGCGCCTGCGAGGGCGCCGCGCGCGCGCCCGGCCTGCTGCACACGCTCGTGTCGCTCGTCACTGTNNNNNNNNNNCTGGTGAGCGCGCTGGAGTGCGTGTACGCGCTCACGGCGCTCGGCGACCGCGCCTGCGAGGGTGCCGCGCGCGCGCCCGGCCTGCTGCACACGCTCGTGTCGCTCGTCACTGTCGAGGCACAGAGCTACGGCCCCCGCGCGTGTATCCTGATGCGCGTGGTAGAGACTGTGAGCGGTCCCGGCGCGCTGGCGGCGCCTGCGCAAGAGGAGCGCCCTGCTGTGCCGCCTGCACAgCCACAACCACCTCAACCTAAAGTGGAAGCCCAGCCGTCTCCAAGTCCAACACCAGCACCACCAATGACGCCATTGCAACAGTCGCATCTACAACAGAGGACTGTTCAGGAGAACGAGCACTTCGCGCTGGCGTGGCTGCGCGCGACGGTGGCGCTGGCGGGCGGCGACGAGGGCGCGTGCGACGCGGCCGAGCTGCACCGCCACTACGCCGCCTGCTGCGCCAAGCTGGCGCGCAAGCCCGTGCCCGCCGCGCACTTCCCGCGCCTCGTGCGAACTGTATTCGGTGGTACCGTCGGTCCCAATACAATTACGAACGCGGCAGGGGAAACTCAAACCGTATACATTGGTATACGAGCCAAGAACTTACCTAATAGAACTAATCCACCAGTTggtCCGTCCTCGCCGATACTGAAAGCGCAGTTAACGAACAAACCAACGGTCGTTGTCGAACAGAAGCCTGTAGTTGTCTCTCAGCCTgcgGTCCAACAAACTCAACCACATCCCCATCTATCGCAAGCTCTCGAACCGGTGACCATCGGCGTGAACAACACATCCCTTATAAAACATTTGTTAGCACACAAAGTAAGCCCGCCGCAAGTACAAGTCGCACAAAGACAACAAAATCAACAAAGAGGGGCCGCTGGGACTGTTGTTGTTCAACAGAATTCTAATACAaatatggaGGTAGATCCCGAATCGTTAATTAAATGCACTACTATAATACCTGGTGGTGTAAGCAATACGACTACCGGTGATAAGttgatAATAAACACTAACGAAGAAATCATAGGTAAGTGA
- Protein Sequence
- MAKSQINTKSRDYLRDKEIFLKELKQFNESKNIPYKIPVVNGIDIDLYLLYSLVLQRGGLSKVNQNDTWESFLRQLRLPHPCVNGSTLLRRIYGTYLEKYERAKGPPGRDDDNDMDEDPRRGSRSGHGGMPRISFGSGTYISASGEQLRTGNRVAGPSERLTLSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGRYPHEFWQLRAGGGGAKELADETKFMNPGLEQPELMVQALAAHNALTDCLMQGEESGDVIEKVLDDQDILEDWVTEPSEEDQLFAPELSGGASCVYTQRVLQIASIVRSLSFHEENVQYLARNTTLIRFLLLCANCWVGSLRQSGLDTLGNVSTELIIKDPATCLISRHVLSTIQSALVSPDRARVLAALELLNKLAQNEANEDALLKALDPKVYSDVVALLTLRDIMALVSALECVYALTALGDRACEGAARAPGLLHTLVSLVTVXXXLVSALECVYALTALGDRACEGAARAPGLLHTLVSLVTVEAQSYGPRACILMRVVETVSGPGALAAPAQEERPAVPPAQPQPPQPKVEAQPSPSPTPAPPMTPLQQSHLQQRTVQENEHFALAWLRATVALAGGDEGACDAAELHRHYAACCAKLARKPVPAAHFPRLVRTVFGGTVGPNTITNAAGETQTVYIGIRAKNLPNRTNPPVGPSSPILKAQLTNKPTVVVEQKPVVVSQPAVQQTQPHPHLSQALEPVTIGVNNTSLIKHLLAHKVSPPQVQVAQRQQNQQRGAAGTVVVQQNSNTNMEVDPESLIKCTTIIPGGVSNTTTGDKLIINTNEEIIGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -