Hhim007377.1
Basic Information
- Insect
- Heliconius himera
- Gene Symbol
- retn
- Assembly
- GCA_013421065.1
- Location
- JAATLT010020260.1:110781-153270[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-27 1.5e-23 83.2 0.0 1 89 9 95 9 95 0.96 2 2 8 2e+04 -4.0 0.0 27 38 159 170 154 171 0.74
Sequence Information
- Coding Sequence
- CTGTACGAAATCAGTGATGATCCACAAAGGAAAGAGTTTCTTGACGACTTGTTCTCCTTCATGCAGAAGCGAGGCACACCAATAAATCGACTGCCCATCATGGCGAAGTCAGTATTGGATCTGTACGAGCTCTACAACCTGGTGATAGCCCGCGGAGGTCTCGTGGAGGTCATCAACAAGAAACTCTGGCAAGAGATCATTAAAGGCCTGCGACTTCCCTCCTCCATAACTTCAGCCGCATTCACTTTACGCACACAatacatgaaatatttatacgatTACGAGTGCGAGAAAAAGAACCTGTCGACTAGGAGCGAGCTGGACGCGGCTATCGAGGGCAACAAGCGGGAGGGACGTCGCGCCTCCGGGCAGTACGACGCGCAGGCCGCCTTGGCCATGGTTAGTATTGTATGGTCAGAATCTCCTCCAGGAGCTCCAATGGTGTCTCCAAGAGACGCGGCGTTGTCAGCCATCGACGTGTCACGACTTACTCTATGGTCActctataacaataataataacagccCACAACCGGACTTGGAACCACAACgCGAAGCCCTAAACCTGAGCGAGAGCCCCACGCTGCCGTCCAAGCGCGAGGCGTGCCGCTCCCCTCCCCCGCCCGCCAAGCGGCGCACGCCCCTCCCCCGCGCGCCCTCCCCGcccgcgcgcgccgcgcccTCCCCGCACGCCTCGCCGCCGCGCGCGCTGCACGTCAACGGGAATCTCGTAGTCTCAATCGAATTAAACGGCGTCACGTATGAGGGCGTCCTCTTCCCCTCACAGAACGGCAACGGACAGAACGGCCATCGGCAAATGGTTTCTTAA
- Protein Sequence
- LYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMVSIVWSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPTLPSKREACRSPPPPAKRRTPLPRAPSPPARAAPSPHASPPRALHVNGNLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -