Basic Information

Gene Symbol
GATA-B
Assembly
GCA_018230445.1
Location
DWAN01043485.1:1-1585[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-18 6.6e-15 55.1 3.9 1 34 11 43 11 45 0.97
2 2 4.5e-19 1.6e-15 57.0 6.7 1 35 76 109 76 110 0.97

Sequence Information

Coding Sequence
ATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCGATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCCTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGtgcgcgcgccgccgccgcgccgcccgGCCACATGGGCACGAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACCACGGCCACGTCGCTGTGGCGCCGCAACGCGCACGGTGAGACCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTCAACCGCCCCATCACCATGAAGAAGGACTCCATACAGACGAGAAAGAGGAAACCTAAGAGCAGCATCAAAGCGGAAAGGAGTCTGAACAAGAGCATTGGTCACGCGCTGCACGCCAGCTCCGTCGGCGGCGGCGCCTCCGTCAAGATAGAGAACATAT
Protein Sequence
MAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRARAAAAPPGHMGTKRPGMSCTNCQTTATSLWRRNAHGETVCNACGLYYKLHNVNRPITMKKDSIQTRKRKPKSSIKAERSLNKSIGHALHASSVGGGASVKIENI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-