Basic Information

Insect: Heliconius hewitsoni
Gene Symbol: -
Assembly: GCA_018230445.1
Location: DWAN01011603.1:1764-4646[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.8e-05 0.0014 19.6 1.0 1 23 221 243 221 243 0.97

2 11 3.3e-05 0.0027 18.7 1.2 1 23 249 272 249 272 0.96

3 11 0.00019 0.015 16.3 0.3 1 23 279 301 279 301 0.98

4 11 0.00067 0.055 14.6 7.0 1 23 308 330 308 330 0.98

5 11 1.3 1.1e+02 4.2 2.1 1 23 337 359 337 359 0.92

6 11 0.0043 0.35 12.0 1.8 1 23 365 388 365 388 0.96

7 11 0.0035 0.29 12.3 1.2 2 23 394 413 393 413 0.97

8 11 2.4e-07 2e-05 25.4 2.8 1 23 419 441 419 441 0.98

9 11 4.5e-06 0.00037 21.4 1.0 1 23 447 469 447 469 0.98

10 11 2.1e-05 0.0017 19.3 0.4 1 23 475 498 475 498 0.97

11 11 0.03 2.4 9.4 0.9 1 19 504 522 504 522 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.8e-05	0.0014	19.6	1.0	1	23	221	243	221	243	0.97
2	11	3.3e-05	0.0027	18.7	1.2	1	23	249	272	249	272	0.96
3	11	0.00019	0.015	16.3	0.3	1	23	279	301	279	301	0.98
4	11	0.00067	0.055	14.6	7.0	1	23	308	330	308	330	0.98
5	11	1.3	1.1e+02	4.2	2.1	1	23	337	359	337	359	0.92
6	11	0.0043	0.35	12.0	1.8	1	23	365	388	365	388	0.96
7	11	0.0035	0.29	12.3	1.2	2	23	394	413	393	413	0.97
8	11	2.4e-07	2e-05	25.4	2.8	1	23	419	441	419	441	0.98
9	11	4.5e-06	0.00037	21.4	1.0	1	23	447	469	447	469	0.98
10	11	2.1e-05	0.0017	19.3	0.4	1	23	475	498	475	498	0.97
11	11	0.03	2.4	9.4	0.9	1	19	504	522	504	522	0.97

Sequence Information

Coding Sequence: ATGGCTaatgaaaagaataaatttaactcGCACAAGTCTTCATCTAGAACTAAAAGAAGTAGTAAAGTTGATAAACTGCAAACACTATTAATAGGTTTTGACAATGACAAGATTACAGAGTTGGTTATGAGAGATCAAACTTCTCCAAATTCAGATGATATTGAAGAACCTGCAGAAAAGGAAATTGTGAAAGACACTCAACATGATACAGTAATTTTAAAggattcaataataaaaagagaagTACATGTTCCAAAAGACAGGTTTCTGACAAAACAAGGATATCTTAAACGTAAAAACAAAGATAATTTGCAACTTTGTAATGACATattgaaaaatgaattaatgatTGTGGACAACAGAGAAAAACAAACTAAAGCAGTTCAAAATAACATCAATAACAATGATTTAATTACAAGTgatcaaaataagaaaatatctgacaaacaaattgaaaaaaataataaaacaaaaaggagATCACCAAGGAATAGTGAAAAAAGTGATCAAAGTAGTAGttcatcagaaaaaaaaagaaaaaagtcagATGATAgtcaaaaaagtaaacaaaagaaaaaggaTTGTGTGATTCTTGACTCTGACGATGAATTGGATCTTCCACCATTACAAAGAATAAGACTGCCTGAAAAAAAAGGTGTCTACATCTGTGATCTATGCGACAGAAGATATTCAACTAAATCTTTGATTAGAagacatatgtacatacatttgtaTCGCAAACAATTTCCTTGTGGGCAATGTAAGAAAGTTTTCCgcaaatcatattatttatcagcTCATATTACAAGACAACATCCCAACTGGGATCAACACTACATGTGTAATTTATGCAACAAGCCATTTCTGCTTAAAGAGAACTTAATTGCACACATGACTACTCACACCAACACCGAAACAAAGTTCAAATGTCTTTATTGCAATCAAAAATTTACTCaccaacataaattaattgcaCATgagaaaaaacatttaacagTCAGCGGTAAATATGACTGCCTGGTGTGTGATGAAAGCTTTGATTGTAGAATAAAACTATCTCTGCATTTTAAATCACATTTAAAAGTGAAAGATTATATTTGCCAACACTGTGGTAAAGAATTCTTAAGAATGAATTCAATGAAGCGTCATGTACAAATTTCTCATGCTGGCCTAAGAATCCAATGTCCAATATGTAAGAAAGTTCTCAAAGGTCATTTATCTGAGCATATGCGTACACATGAAAATAAACGTCCTCATAAGTGTCCTGACTGCGGGCAACGTTTTACTCAATCCACTCAGTTAACGGTACATAGAAGATCTCATTCTGGAGCCCGTCCATATCCTTGTAGAATTTGCAATAGACCATTTTCCCATTCCAATGCCCTCATGTTACATATTCGACGTCACACAGGAGAAAAACCCTTTCCTTGTGCCATGTGCCCTCTGTCTTTCTCACAGCTACCTCACATGAAAGCCCATATGAGAAAAATACACGGCCAAACTAACCCATACCGatgtaaaaaatgtgaacagtttttcaaattaaaaattgaccTTGAAGATCATGACAAAGTTTGTCAAGTAGGAGTAAAAGAATTGTCCTTTGAGGAGAAAATCCAGGCTTCAGTTCAAGTTGAAGAGGAGGAGGTCGTCGAATCTGTAATGAGCTTGTCTCGAATGAGATTTCTATTAGCACTCCTTCTCACTATGATTGCTACCAAAGAGAAACTCAAATATTTAGgtTTTAACAAACGCCTCATAGACGATTTGCTAGTGGAATCACTTGAAGCCATGGGCCATGTTCCGTGTAAAAATGAATCTCTTACTCCACTAAAACGTTTGAAgatgaatattgaaatattactaaatggGACTGTGCCTAAAGAAAAAATGGCTAAATTCAAAAAAGAGAACAAGAGCACAGAAGATATATTGGAGCTACTCACAGACGAAAAGAAGTaa
Protein Sequence: MANEKNKFNSHKSSSRTKRSSKVDKLQTLLIGFDNDKITELVMRDQTSPNSDDIEEPAEKEIVKDTQHDTVILKDSIIKREVHVPKDRFLTKQGYLKRKNKDNLQLCNDILKNELMIVDNREKQTKAVQNNINNNDLITSDQNKKISDKQIEKNNKTKRRSPRNSEKSDQSSSSSEKKRKKSDDSQKSKQKKKDCVILDSDDELDLPPLQRIRLPEKKGVYICDLCDRRYSTKSLIRRHMYIHLYRKQFPCGQCKKVFRKSYYLSAHITRQHPNWDQHYMCNLCNKPFLLKENLIAHMTTHTNTETKFKCLYCNQKFTHQHKLIAHEKKHLTVSGKYDCLVCDESFDCRIKLSLHFKSHLKVKDYICQHCGKEFLRMNSMKRHVQISHAGLRIQCPICKKVLKGHLSEHMRTHENKRPHKCPDCGQRFTQSTQLTVHRRSHSGARPYPCRICNRPFSHSNALMLHIRRHTGEKPFPCAMCPLSFSQLPHMKAHMRKIHGQTNPYRCKKCEQFFKLKIDLEDHDKVCQVGVKELSFEEKIQASVQVEEEEVVESVMSLSRMRFLLALLLTMIATKEKLKYLGFNKRLIDDLLVESLEAMGHVPCKNESLTPLKRLKMNIEILLNGTVPKEKMAKFKKENKSTEDILELLTDEKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00774672;
90% Identity: iTF_00781220;
80% Identity: -